BLASTX nr result
ID: Catharanthus22_contig00045490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00045490
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea] 62 8e-08
gb|EMJ13586.1| hypothetical protein PRUPE_ppa016253mg [Prunus pe... 61 2e-07
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297... 58 1e-06
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 57 2e-06
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A... 57 2e-06
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 57 3e-06
gb|EPS61668.1| hypothetical protein M569_13125, partial [Genlise... 56 6e-06
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 56 6e-06
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 56 6e-06
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 55 6e-06
gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis] 55 7e-06
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 55 9e-06
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 55 9e-06
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 55 9e-06
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 55 9e-06
>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
Length = 1255
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL 177
LLAK CWRI+ P SL+A L KYY +FL +SLGR PSF W +L R LL GL
Sbjct: 760 LLAKQCWRILMKPDSLLAQLLKGKYYRNTSFLCASLGRSPSFTWRSLLTARELLVSGL 817
>gb|EMJ13586.1| hypothetical protein PRUPE_ppa016253mg [Prunus persica]
Length = 158
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LL K WR+++ P+SL A L +Y+L +FL +S G PSF W IL GR LL LGL
Sbjct: 13 LLCKQGWRLLEFPNSLAACMLKPRYFLDTDFLQASHGDYPSFTWLSILWGRELLQLGLHL 72
Query: 184 HIGN 195
HIG+
Sbjct: 73 HIGD 76
>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WR+I+ P+SL+A L +Y+ +E+F+ + + + SF W ILKGR+LL GL
Sbjct: 630 LLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAEVAKGCSFTWRSILKGRDLLKKGLRF 689
Query: 184 HIGN 195
+GN
Sbjct: 690 QVGN 693
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 56.6 bits (135), Expect(2) = 2e-06
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK CWR+++ P SL+A +Y+ +FL + +G PSF W I+ R+LL+ GL
Sbjct: 114 LLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRW 173
Query: 184 HIGN 195
+GN
Sbjct: 174 RVGN 177
Score = 20.8 bits (42), Expect(2) = 2e-06
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 203 STSILHDKWIP 235
S S+ +DKW+P
Sbjct: 180 SISVKYDKWVP 190
>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 473
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WR++ +P SLMA L KY+ F+ + LG +PSF+W I+ GR LL GL
Sbjct: 22 LLAKQGWRLLHNPDSLMAKILKAKYFSHSGFMEAKLGSKPSFVWRSIIWGRELLQEGLRW 81
Query: 184 HIG 192
IG
Sbjct: 82 RIG 84
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WRI++ PS L A +Y+ E FL + LG RPS+ C IL GR LL+ GL
Sbjct: 641 LLAKQSWRILQYPSFLFARFFKSRYFDDEEFLEADLGVRPSYACCSILFGRELLAKGLRK 700
Query: 184 HIGN 195
+GN
Sbjct: 701 EVGN 704
>gb|EPS61668.1| hypothetical protein M569_13125, partial [Genlisea aurea]
Length = 317
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL 177
LLAK CWRI P L++ + KY+ + +FL + LGRRPS+ W +L R LL GL
Sbjct: 67 LLAKQCWRIFAQPELLLSQLMKGKYFKSSSFLEARLGRRPSYTWPSLLTARELLVSGL 124
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WRII S SL+ L KY+ + +FL + +G S++W +LKGR+LL G+
Sbjct: 825 LLAKKGWRIINSLDSLVTRTLKAKYFPSGHFLKAEMGSDASYVWRSLLKGRDLLRKGIRY 884
Query: 184 HIGN 195
H+GN
Sbjct: 885 HVGN 888
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WR+++ P L A + +Y+ FL S +G RPSF W IL GR+LL GL
Sbjct: 713 LLAKQAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGRDLLCRGLVK 772
Query: 184 HIGN 195
+GN
Sbjct: 773 RVGN 776
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 54.7 bits (130), Expect(2) = 6e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK CWR+ + P SL+A +Y+ +FL + +G PSF W I+ R LL+ GL
Sbjct: 114 LLAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRW 173
Query: 184 HIGN 195
+GN
Sbjct: 174 RVGN 177
Score = 20.8 bits (42), Expect(2) = 6e-06
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 203 STSILHDKWIP 235
S S+ +DKW+P
Sbjct: 180 SISVKYDKWVP 190
>gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]
Length = 1455
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK WRI+ PSSL+AI KY+ FL + +G PS+ W IL GR LL G+
Sbjct: 162 LLAKQGWRILSKPSSLVAIIFKAKYFPKGEFLDAYIGHNPSYTWRSILWGRELLKSGIRR 221
Query: 184 HIGN 195
+G+
Sbjct: 222 RVGS 225
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
L+AK WRII++P SL+A + EKY+ F+ + +G PS++W IL GR ++ GL
Sbjct: 276 LVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRW 335
Query: 184 HIGN 195
IG+
Sbjct: 336 RIGD 339
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
L+AK WRII++P SL+A + EKY+ F+ + +G PS++W IL GR ++ GL
Sbjct: 479 LVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRW 538
Query: 184 HIGN 195
IG+
Sbjct: 539 RIGD 542
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
L+AK WRII++P SL+A + EKY+ F+ + +G PS++W IL GR ++ GL
Sbjct: 276 LVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRW 335
Query: 184 HIGN 195
IG+
Sbjct: 336 RIGD 339
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 55.1 bits (131), Expect = 9e-06
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 4 LLAK*CWRIIKSPSSLMAICL*EKYYLTENFLSSSLGRRPSFLWCIILKGRNLLSLGL*C 183
LLAK CWRI+++P SL+A +Y+ + FL + +G PSF+W + G+ LL+ GL
Sbjct: 568 LLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRW 627
Query: 184 HIGN 195
+G+
Sbjct: 628 RVGS 631