BLASTX nr result

ID: Catharanthus22_contig00045467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00045467
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]    57   2e-06
emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]    56   4e-06
emb|CAN82678.1| hypothetical protein VITISV_009305 [Vitis vinifera]    55   7e-06

>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
          Length = 1159

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
 Frame = +2

Query: 11  KVAFKDHSEP-----------KVEEKERLVTNSTRCFK*NGVGHIVINCPTKRTLIFNEE 157
           +V FK  ++P           K + K +      +CF+  GVGHI   CP KRT+I    
Sbjct: 265 EVVFKSKTKPXKMRDEAPNVNKGKNKSQTHNRDIKCFRCLGVGHIASQCPNKRTMI--AR 322

Query: 158 LNGWIEREEDDCQDDLVGKEEGNEDQEIDSFETIEEGMSLVTIKA*STQVFEEEASVQRE 337
           ++G +E E ++  D +   E+  +    D+ E   EG SLV  +A S QV +++   QRE
Sbjct: 323 VDGEVETESEEDDDQMPSLEDACD----DNVEYPVEGESLVARRALSAQVKKDDMEQQRE 378

Query: 338 N 340
           N
Sbjct: 379 N 379


>emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]
          Length = 776

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
 Frame = +2

Query: 14  VAFKDHSEP-----------KVEEKERLVTNSTRCFK*NGVGHIVINCPTKRTLIFNEEL 160
           V FK  +EP           K + + +      +CF+  GVGHI   CP KRT+I    +
Sbjct: 386 VVFKSKTEPPKRRDEAPNVNKGKNESQTRNRDIKCFRCLGVGHIASQCPNKRTMI--AXV 443

Query: 161 NGWIEREEDDCQDDLVGKEEGNEDQEIDSFETIEEGMSLVTIKA*STQVFEEEASVQREN 340
           +G +E E ++  D +   E+  +    ++ E   EG SLV  +A S QV E++   QREN
Sbjct: 444 DGEVETESEEDDDQMPSLEDACD----NNVEYPVEGESLVARRALSAQVKEDDMEQQREN 499


>emb|CAN82678.1| hypothetical protein VITISV_009305 [Vitis vinifera]
          Length = 417

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/87 (43%), Positives = 48/87 (55%)
 Frame = +2

Query: 80  RCFK*NGVGHIVINCPTKRTLIFNEELNGWIEREEDDCQDDLVGKEEGNEDQEIDSFETI 259
           +CF+  GVGHI   CP KR +I   +    IE EED   DDL+      ED   D+ E +
Sbjct: 304 KCFRCLGVGHIASQCPNKRIMIARVDGEVEIESEED---DDLM---PSLEDACDDNVEYL 357

Query: 260 EEGMSLVTIKA*STQVFEEEASVQREN 340
            EG SLV   A S+QV E++   QREN
Sbjct: 358 VEGESLVARLALSSQVKEDDMEQQREN 384


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