BLASTX nr result
ID: Catharanthus22_contig00045188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00045188
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 122 5e-26
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 122 5e-26
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 122 6e-26
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 122 6e-26
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 119 4e-25
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 119 5e-25
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 118 7e-25
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 118 9e-25
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 118 9e-25
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 117 2e-24
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 117 2e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 117 2e-24
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 117 2e-24
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 117 2e-24
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 116 3e-24
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 115 6e-24
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 113 2e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 113 3e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 113 3e-23
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 112 4e-23
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 122 bits (306), Expect = 5e-26
Identities = 53/93 (56%), Positives = 72/93 (77%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G + P +VC+L+KSLYGL+QAPRCWF KL+TALR GF+QSY DYSLF+ + +
Sbjct: 1116 GFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIH 1175
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+V GN+L ++ +FK+ L+ CFHMKD
Sbjct: 1176 VLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKD 1208
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 122 bits (306), Expect = 5e-26
Identities = 53/93 (56%), Positives = 72/93 (77%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G + P +VC+L+KSLYGL+QAPRCWF KL+TALR GF+QSY DYSLF+ + +
Sbjct: 396 GFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIH 455
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+V GN+L ++ +FK+ L+ CFHMKD
Sbjct: 456 VLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKD 488
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 122 bits (305), Expect = 6e-26
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G HP +VC+L+K+LYGL+QAPRCWF KLTTAL++ GF QS ADYSLFT + +V +
Sbjct: 953 GFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIK 1012
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
+LIY+DDL++TGNS + +FK L +CFHMKD
Sbjct: 1013 ILIYVDDLIITGNSQRATQQFKEYLASCFHMKD 1045
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 122 bits (305), Expect = 6e-26
Identities = 58/93 (62%), Positives = 71/93 (76%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G R HP +VC+L+KSLYGL+QAPRCWF KL+ +L + GF QSY DYSLF+Y+RNN+ L
Sbjct: 1121 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELR 1180
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VLIY+DDLL+ GN L KFK L+ CF MKD
Sbjct: 1181 VLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKD 1213
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 119 bits (298), Expect = 4e-25
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL TAL+ GF QSY+DYSLFTY++ NV +
Sbjct: 1081 GFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 1140
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++GN +L FKA L+ CF MKD
Sbjct: 1141 VLVYVDDLIISGNDSAALKTFKAYLSDCFKMKD 1173
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 119 bits (297), Expect = 5e-25
Identities = 54/93 (58%), Positives = 70/93 (75%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL TAL+ GF QSY+DYSLFTY++ NV +
Sbjct: 793 GFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 852
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++G+ +L FKA L+ CF MKD
Sbjct: 853 VLVYVDDLIISGBDSAALKTFKAYLSDCFKMKD 885
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 118 bits (296), Expect = 7e-25
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L KSLYGL+QAPRCWF KL TAL+ GF QSY+DYSLFTY++ NV +
Sbjct: 749 GFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 808
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++GN +L FKA L+ CF MKD
Sbjct: 809 VLVYVDDLIISGNDSAALKTFKAYLSDCFKMKD 841
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 118 bits (295), Expect = 9e-25
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL TAL+ GF QSY+DYSLFTY+ NV +
Sbjct: 719 GFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQIN 778
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++GN +L FKA L+ CF MKD
Sbjct: 779 VLVYVDDLIISGNDSAALKTFKAYLSDCFKMKD 811
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 118 bits (295), Expect = 9e-25
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL TAL+ GF QSY+DYSLFTY+ NV +
Sbjct: 798 GFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQIN 857
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++GN +L FKA L+ CF MKD
Sbjct: 858 VLVYVDDLIISGNDSAALKTFKAYLSDCFKMKD 890
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 117 bits (293), Expect = 2e-24
Identities = 50/93 (53%), Positives = 75/93 (80%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G + P +VC+L KSLYGL+QAPRCWF KL++AL++ GF+QS +DYSLF+Y+ + VF+
Sbjct: 729 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVH 788
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++G+ ++ +FK+ L +CFHMKD
Sbjct: 789 VLVYVDDLIISGSCPDAVAQFKSYLESCFHMKD 821
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 117 bits (293), Expect = 2e-24
Identities = 52/85 (61%), Positives = 69/85 (81%)
Frame = +1
Query: 34 QVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLCVLIYMDDL 213
+VC+L+K+LYGL+QAPRCWF KLTTAL GF Q +DYSLFT RN + L +L+Y+DDL
Sbjct: 1076 KVCRLRKALYGLKQAPRCWFAKLTTALNDYGFIQDISDYSLFTMERNGIRLHILVYVDDL 1135
Query: 214 LVTGNSLPSLTKFKASLNACFHMKD 288
++TG+SL +TKFK L++CF+MKD
Sbjct: 1136 IITGSSLDVITKFKGYLSSCFYMKD 1160
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 117 bits (293), Expect = 2e-24
Identities = 50/93 (53%), Positives = 75/93 (80%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G + P +VC+L KSLYGL+QAPRCWF KL++AL++ GF+QS +DYSLF+Y+ + VF+
Sbjct: 729 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVH 788
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++G+ ++ +FK+ L +CFHMKD
Sbjct: 789 VLVYVDDLIISGSCPDAVAQFKSYLESCFHMKD 821
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 117 bits (292), Expect = 2e-24
Identities = 53/93 (56%), Positives = 69/93 (74%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL T L+ GF QSY+DYSLFTY++ NV +
Sbjct: 925 GFESXDPNLVCRLRKSLYGLKQAPRCWFAKLVTXLKGYGFLQSYSDYSLFTYTKGNVQIN 984
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++GN +L FKA L+ CF MK+
Sbjct: 985 VLVYVDDLIISGNDSAALKTFKAYLSDCFKMKB 1017
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 117 bits (292), Expect = 2e-24
Identities = 49/93 (52%), Positives = 75/93 (80%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G + P +VC+L KSLYGL+QAPRCWF KL++AL++ GF+QS +DYSLF+Y+ + +F+
Sbjct: 1088 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVH 1147
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++G+ ++ +FK+ L +CFHMKD
Sbjct: 1148 VLVYVDDLIISGSCPDAVAQFKSYLESCFHMKD 1180
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 116 bits (291), Expect = 3e-24
Identities = 54/93 (58%), Positives = 69/93 (74%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P VC+L+KSLYGL+QAPRCWF KL TAL+ GF QSY++YSLFTY++ NV +
Sbjct: 1081 GFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNVQIN 1140
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++ N +L FKA LN CF MKD
Sbjct: 1141 VLVYVDDLIISRNDSAALKTFKAYLNDCFKMKD 1173
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 115 bits (288), Expect = 6e-24
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G R HP +VC+L+KSLYGL+QAPRCWF KL+ AL + GF Q + DYS F+Y+RN + L
Sbjct: 768 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELR 827
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDLL+ GN L KFK L CF MKD
Sbjct: 828 VLVYVDDLLICGNDGYMLQKFKEYLGRCFSMKD 860
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 113 bits (283), Expect = 2e-23
Identities = 51/93 (54%), Positives = 71/93 (76%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G R +VC+L+KSLYGL+QAPRCWF KLT+AL+ GF Q +DYSLF + +N V L
Sbjct: 1106 GFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGFIQDISDYSLFIFHKNGVRLH 1165
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL++TG ++ +T+FK L++CF+MKD
Sbjct: 1166 VLVYVDDLIITGTTIAVITEFKHYLSSCFYMKD 1198
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 113 bits (282), Expect = 3e-23
Identities = 52/93 (55%), Positives = 66/93 (70%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G R HP +VC+L+KSLYGL+QAPRCWF KL+ AL++ GF Q Y DYS F+YS + L
Sbjct: 1111 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELR 1170
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL++ GN + KFK L CF MKD
Sbjct: 1171 VLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKD 1203
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 113 bits (282), Expect = 3e-23
Identities = 52/93 (55%), Positives = 66/93 (70%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G R HP +VC+L+KSLYGL+QAPRCWF KL+ AL++ GF Q Y DYS F+YS + L
Sbjct: 1111 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELR 1170
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL++ GN + KFK L CF MKD
Sbjct: 1171 VLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKD 1203
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 112 bits (281), Expect = 4e-23
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = +1
Query: 10 GLRPPHPGQVCKLQKSLYGLRQAPRCWFFKLTTALRKCGFSQSYADYSLFTYSRNNVFLC 189
G P PG+VC L+KSLYGL+QAP+CWF KL AL GF QSY DYSLFTY ++ L
Sbjct: 822 GFASPTPGKVCGLRKSLYGLQQAPKCWFAKLVAALTSYGFKQSYLDYSLFTYEAQHIQLN 881
Query: 190 VLIYMDDLLVTGNSLPSLTKFKASLNACFHMKD 288
VL+Y+DDL+++ N ++ +FK L+ CFH+KD
Sbjct: 882 VLVYVDDLIISRNDGTTVQQFKDYLSRCFHIKD 914