BLASTX nr result
ID: Catharanthus22_contig00044948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044948
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306073.1| PREDICTED: putative ribonuclease H protein A... 72 8e-11
ref|XP_004305757.1| PREDICTED: putative ribonuclease H protein A... 71 1e-10
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 69 6e-10
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 69 6e-10
gb|EMJ10020.1| hypothetical protein PRUPE_ppa025050mg [Prunus pe... 68 1e-09
gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [... 68 1e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 68 1e-09
ref|XP_002314708.1| predicted protein [Populus trichocarpa] 68 1e-09
ref|XP_002309989.1| predicted protein [Populus trichocarpa] 68 1e-09
dbj|BAE71259.1| hypothetical protein [Trifolium pratense] 67 2e-09
ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein A... 66 4e-09
ref|XP_004292270.1| PREDICTED: putative ribonuclease H protein A... 66 5e-09
ref|XP_002324246.1| predicted protein [Populus trichocarpa] 65 1e-08
gb|EMJ08167.1| hypothetical protein PRUPE_ppb019197mg [Prunus pe... 64 2e-08
ref|XP_004305448.1| PREDICTED: putative ribonuclease H protein A... 64 2e-08
ref|XP_002514383.1| nuclease, putative [Ricinus communis] gi|223... 63 3e-08
gb|EMJ25836.1| hypothetical protein PRUPE_ppa026477mg [Prunus pe... 62 6e-08
ref|XP_004306184.1| PREDICTED: putative ribonuclease H protein A... 62 8e-08
ref|XP_004293144.1| PREDICTED: putative ribonuclease H protein A... 62 8e-08
ref|XP_004292858.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
>ref|XP_004306073.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 187
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/104 (32%), Positives = 57/104 (54%)
Frame = +1
Query: 34 MTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVA 213
M G GVIRNH G W+ G+ N+GV + E W L GL+ A+ L+ L++E DS +
Sbjct: 21 MIGAGGVIRNHAGAWIAGFQINLGVCAILDAEAWALFHGLKLASKLHISCLEIESDSAIL 80
Query: 214 IDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
+ L+N + + S++ CS ++ ++L H +E + T+
Sbjct: 81 VQLMNCSNLSSHPLGSLLGGCSSMMTEMDDVKLFHIFREANMTA 124
>ref|XP_004305757.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 395
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G GVIRNH GDW+ G+ N+GV + E W L GL+ A +LN L +E DS + +
Sbjct: 264 GAGGVIRNHYGDWISGFQINLGVGEILDAEAWGLFQGLKLAVSLNINNLIIESDSAILVQ 323
Query: 220 LINSIDPNDSLYCSIISYCSRLLD--SFRSIRLHHAHQETDKTS 345
L+N+ + + S++ CS L++ +S L H +E + T+
Sbjct: 324 LMNNSEFGNHPLGSLLQGCSSLMNKMEMKSATLSHIFRECNSTT 367
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
G++RN G WV GY+ NIG AN+ ELW LR+GL A N L E DS+ + ++
Sbjct: 1759 GLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR 1818
Query: 229 SIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQE 330
P ++ C LLD F+ I++ H +E
Sbjct: 1819 KDGPVTPDASILVKDCKLLLDHFQEIKVTHILRE 1852
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
G++RN G WV GY+ NIG AN+ ELW LR+GL A N L E DS+ + ++
Sbjct: 1227 GLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR 1286
Query: 229 SIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQE 330
P ++ C LLD F+ I++ H +E
Sbjct: 1287 KDGPVTPDASILVKDCKLLLDHFQEIKVTHILRE 1320
>gb|EMJ10020.1| hypothetical protein PRUPE_ppa025050mg [Prunus persica]
Length = 241
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/107 (33%), Positives = 55/107 (51%)
Frame = +1
Query: 25 WEPMTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDS 204
W+ TG G++R+ G W+ G+S NIG+ N ELW L GLQ A N LDVE D
Sbjct: 96 WKITTG--GLLRDSHGSWICGFSVNIGIGNIAKGELWSLLKGLQMAWNRGIRSLDVECDF 153
Query: 205 QVAIDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
+ L+ + +I C LL+ S ++ H ++E ++T+
Sbjct: 154 LYVVSLMAKVSDQSHPLLCLIEDCKSLLNRDWSCKISHVYREQNRTA 200
>gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [Prunus persica]
Length = 295
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
GV+R+H G W+ G++ N+G + ELW L GL A N + + +E+DS + LI
Sbjct: 154 GVLRDHLGQWIAGFAVNLGQGEVLDAELWGLFFGLNLAVEKNLDDIVIEMDSDTVMLLIE 213
Query: 229 SIDPND-SLYCSIISYCSRLLDSFRSIRLHHAHQE 330
S ND ++S C RL++ FR I+L H ++E
Sbjct: 214 SKVLNDCHPNAGLVSSCKRLMNLFRRIKLQHIYRE 248
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/94 (37%), Positives = 49/94 (52%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
G++RN G WV GY NIG AN+ ELW LR+GL A N L E DS+ + ++
Sbjct: 1227 GLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR 1286
Query: 229 SIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQE 330
P ++ C LLD F+ I++ H +E
Sbjct: 1287 KDGPVTPDASILVKDCKLLLDHFQEIKVTHILRE 1320
>ref|XP_002314708.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/101 (33%), Positives = 56/101 (55%)
Frame = +1
Query: 34 MTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVA 213
+ G GVIR+H G W+GG++RNIG+ +++ ELW + GLQ A + +D+E DS+V
Sbjct: 98 VAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVV 157
Query: 214 IDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETD 336
+ LIN +II +L + +H ++E +
Sbjct: 158 VGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYREAN 198
>ref|XP_002309989.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/101 (33%), Positives = 56/101 (55%)
Frame = +1
Query: 34 MTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVA 213
+ G GVIR+H G W+GG++RNIG+ +++ ELW + GLQ A + +D+E DS+V
Sbjct: 98 VAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVV 157
Query: 214 IDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETD 336
+ LIN +II +L + +H ++E +
Sbjct: 158 VGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTYHVYREAN 198
>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
Length = 553
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/97 (31%), Positives = 58/97 (59%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
G+IR +G+W+GG++R +G + I ELW + +GL A L +++ VDS V + I
Sbjct: 412 GIIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAVELNVDSVVVVQAIK 471
Query: 229 SIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDK 339
+ + S+ ++ + R+LD I++ HA++E++K
Sbjct: 472 TGRFSSSVGLPLVKHIRRMLDLDWEIKIEHAYRESNK 508
>ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +1
Query: 34 MTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVA 213
M G GVIRNH W+ G+ N+GV I E W L GL+ A+NL+ L++E DS +
Sbjct: 58 MIGAGGVIRNHSDAWITGFQINLGV-GAIDAEAWGLFHGLKLASNLHISKLEIESDSAIL 116
Query: 214 IDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
+ L+ S + + S+++ C ++ ++L H +E++ T+
Sbjct: 117 VHLMKSANLSLHPLGSLLNGCKSMMSQMDDVKLSHVFRESNMTA 160
>ref|XP_004292270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 224
Score = 65.9 bits (159), Expect = 5e-09
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
GV+RN +G+W+ G+S +G+ + ELW L G++ A L+VEVDS VA+ L+
Sbjct: 83 GVLRNDRGEWLNGFSAKLGIGQVLEAELWGLLKGMEMAWQHGCNSLEVEVDSLVAVKLVL 142
Query: 229 S-IDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
S ID LY S+I+ C L ++ L H ++E++ +
Sbjct: 143 SVIDHLHPLY-SLITNCQESLSRNWNVSLIHDYRESNSVA 181
>ref|XP_002324246.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 34 MTGR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVA 213
+ G GVIR H G W+GG++RNI + +++ ELW + GLQ A + +D+E DS+V
Sbjct: 98 VAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVV 157
Query: 214 IDLINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETD 336
+ LIN +II +L + +H ++E +
Sbjct: 158 VGLINGDSVRVDRNYNIIMQIKDMLGRDWEVTTYHVYREAN 198
>gb|EMJ08167.1| hypothetical protein PRUPE_ppb019197mg [Prunus persica]
Length = 363
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G G+IR+ GDW+GG++ N+G+ + ELW L GL+ A L +E+DS +
Sbjct: 239 GAGGIIRDSFGDWMGGFAVNLGIGQTLDDELWGLFFGLKLVAAKGVARLSIEMDSMTDVQ 298
Query: 220 LINSIDPNDSLYCS-IISYCSRLLDSFRSIRLHHAHQE 330
LI P+ C+ +I+ C L+ F + L H ++E
Sbjct: 299 LIKQHVPSCLHPCTGVIASCVALISKFEFVELTHVYRE 336
>ref|XP_004305448.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 171
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G GVIRNH G W+ G+ N+GV + E W L GL+ L L+VE DS + ++
Sbjct: 23 GAGGVIRNHAGTWIIGFQINLGVGEILTAEAWGLFYGLKLVVKLQISNLEVESDSAILVN 82
Query: 220 LINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
L+ S + S++ C +L+ + +L H +E++ T+
Sbjct: 83 LMQSSNLALHPLGSLLDGCCKLMSRMENAKLSHIFRESNMTA 124
>ref|XP_002514383.1| nuclease, putative [Ricinus communis] gi|223546480|gb|EEF47979.1|
nuclease, putative [Ricinus communis]
Length = 145
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/99 (30%), Positives = 54/99 (54%)
Frame = +1
Query: 49 GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAIDLIN 228
G+IR+ G WVGG+ +IG + + ELW G+ A + L VEVDS + D +N
Sbjct: 23 GIIRDSNGCWVGGFVIHIGACDPVGAELWAFLQGISLAWSKGIHNLIVEVDSSLVADWMN 82
Query: 229 SIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
S++ +++S C LL ++ +++ H +E ++ +
Sbjct: 83 KKSVCKSIHANLVSACLDLLQNWWDVKIKHVFREMNQVA 121
>gb|EMJ25836.1| hypothetical protein PRUPE_ppa026477mg [Prunus persica]
Length = 353
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G GV+R + G W+GG+S N+G + ELW + G+ LD+E DSQ+A+
Sbjct: 253 GAGGVVRGYSGTWLGGFSTNMGFGQVLQAELWAIYHGIILVCQKEWFPLDIESDSQIAVQ 312
Query: 220 LINSIDPNDSLYCSIISYCSRLLDS 294
+++S + Y S+++ C ++L S
Sbjct: 313 MLSSELEEEHPYYSLVTSCQKMLRS 337
>ref|XP_004306184.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 149
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/102 (28%), Positives = 53/102 (51%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G GVIR+H+G W+ G+ N+GV + E W L ++ A+ L L +E DS V +
Sbjct: 23 GASGVIRDHRGSWISGFQINLGVGEILDAEAWGLFYDMKLASQLQINNLSIESDSAVLVQ 82
Query: 220 LINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQETDKTS 345
L + S++ C + + R+ +++H +E++ T+
Sbjct: 83 LFQCANLEMHPLGSLLKGCKNFMSALRATQINHIFRESNMTA 124
>ref|XP_004293144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 321
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G G+IR+ G W GG+ NIG + E W L G+Q A ++ L++E DS V ++
Sbjct: 173 GAGGIIRDSSGCWCGGFMVNIGAGEVLQAEAWGLFYGIQLAFSMKIPKLEIESDSVVLVN 232
Query: 220 LINSIDPNDSLYCSIISYCSRLLDSFRSIRLHHAHQE 330
L+ + D + +I+ C ++ F +++ H H+E
Sbjct: 233 LLQNSDMDVHPLGTIVLNCRAMMQHFDFVQIKHIHKE 269
>ref|XP_004292858.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 146
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 40 GR*GVIRNHKGDWVGGYSRNIGVANNIPVELWELRDGLQQAANLNTEMLDVEVDSQVAID 219
G GVIRNH GDW+ G+ NIGV + E W L GL+ A +LN + L +E DS + +
Sbjct: 53 GAVGVIRNHFGDWIIGFHINIGVGEILDAEAWGLFHGLKLAVDLNIKNLLIESDSAILVQ 112
Query: 220 LINS----IDPNDSLYCSIISYCSRLLDS 294
L+ + I P SL C + +++ D+
Sbjct: 113 LMQNSNFDIHPLGSLLCGCKNIMNKMEDA 141