BLASTX nr result
ID: Catharanthus22_contig00044937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044937
(339 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66172.1| hypothetical protein VITISV_000730 [Vitis vinifera] 65 1e-08
ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/... 63 4e-08
emb|CBI23704.3| unnamed protein product [Vitis vinifera] 63 4e-08
ref|XP_006489656.1| PREDICTED: actin-related protein 2/3 complex... 61 2e-07
ref|XP_006489655.1| PREDICTED: actin-related protein 2/3 complex... 61 2e-07
ref|XP_006489654.1| PREDICTED: actin-related protein 2/3 complex... 61 2e-07
ref|XP_006420322.1| hypothetical protein CICLE_v10005533mg [Citr... 61 2e-07
ref|XP_006294429.1| hypothetical protein CARUB_v10023443mg [Caps... 60 3e-07
ref|XP_006294428.1| hypothetical protein CARUB_v10023443mg [Caps... 60 3e-07
ref|XP_006294427.1| hypothetical protein CARUB_v10023443mg [Caps... 60 3e-07
ref|XP_002881280.1| hypothetical protein ARALYDRAFT_482281 [Arab... 60 3e-07
ref|XP_006410479.1| hypothetical protein EUTSA_v10017931mg, part... 59 7e-07
ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex... 58 1e-06
ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex... 58 1e-06
ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/... 58 1e-06
gb|EMJ28319.1| hypothetical protein PRUPE_ppa026663mg [Prunus pe... 57 3e-06
ref|XP_002314500.2| hypothetical protein POPTR_0010s07750g [Popu... 56 4e-06
gb|EOY06156.1| Actin-related protein 2/3 complex subunit 2 [Theo... 56 4e-06
ref|NP_001189666.1| actin-related protein C2B [Arabidopsis thali... 56 4e-06
ref|XP_002528374.1| conserved hypothetical protein [Ricinus comm... 56 4e-06
>emb|CAN66172.1| hypothetical protein VITISV_000730 [Vitis vinifera]
Length = 349
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/32 (81%), Positives = 32/32 (100%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVKV 285
DI++HHVEGK+LDKTVW+L+NFYA+VKYHVKV
Sbjct: 238 DIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKV 269
>ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/3 complex subunit
2-like [Vitis vinifera]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI++HHVEGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 238 DIFSHHVEGKQLDKTVWSLLNFYAYVKYHVK 268
>emb|CBI23704.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI++HHVEGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 238 DIFSHHVEGKQLDKTVWSLLNFYAYVKYHVK 268
>ref|XP_006489656.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
isoform X3 [Citrus sinensis]
Length = 368
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DIY H+EGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 238 DIYPRHIEGKRLDKTVWSLLNFYAYVKYHVK 268
>ref|XP_006489655.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
isoform X2 [Citrus sinensis]
Length = 368
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DIY H+EGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 236 DIYPRHIEGKRLDKTVWSLLNFYAYVKYHVK 266
>ref|XP_006489654.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
isoform X1 [Citrus sinensis]
Length = 370
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DIY H+EGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 238 DIYPRHIEGKRLDKTVWSLLNFYAYVKYHVK 268
>ref|XP_006420322.1| hypothetical protein CICLE_v10005533mg [Citrus clementina]
gi|557522195|gb|ESR33562.1| hypothetical protein
CICLE_v10005533mg [Citrus clementina]
Length = 296
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DIY H+EGK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 164 DIYPRHIEGKRLDKTVWSLLNFYAYVKYHVK 194
>ref|XP_006294429.1| hypothetical protein CARUB_v10023443mg [Capsella rubella]
gi|482563137|gb|EOA27327.1| hypothetical protein
CARUB_v10023443mg [Capsella rubella]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGK+LDKTVWNL+NFYA+VKYH+K
Sbjct: 241 DITSRHVEGKRLDKTVWNLLNFYAYVKYHIK 271
>ref|XP_006294428.1| hypothetical protein CARUB_v10023443mg [Capsella rubella]
gi|482563136|gb|EOA27326.1| hypothetical protein
CARUB_v10023443mg [Capsella rubella]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGK+LDKTVWNL+NFYA+VKYH+K
Sbjct: 229 DITSRHVEGKRLDKTVWNLLNFYAYVKYHIK 259
>ref|XP_006294427.1| hypothetical protein CARUB_v10023443mg [Capsella rubella]
gi|482563135|gb|EOA27325.1| hypothetical protein
CARUB_v10023443mg [Capsella rubella]
Length = 364
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGK+LDKTVWNL+NFYA+VKYH+K
Sbjct: 228 DITSRHVEGKRLDKTVWNLLNFYAYVKYHIK 258
>ref|XP_002881280.1| hypothetical protein ARALYDRAFT_482281 [Arabidopsis lyrata subsp.
lyrata] gi|297327119|gb|EFH57539.1| hypothetical protein
ARALYDRAFT_482281 [Arabidopsis lyrata subsp. lyrata]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGK+LDKTVWNL+NFYA+VKYH+K
Sbjct: 235 DITSRHVEGKRLDKTVWNLLNFYAYVKYHIK 265
>ref|XP_006410479.1| hypothetical protein EUTSA_v10017931mg, partial [Eutrema
salsugineum] gi|557111648|gb|ESQ51932.1| hypothetical
protein EUTSA_v10017931mg, partial [Eutrema salsugineum]
Length = 344
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK LDKTVWNL+NFYA+VKYH+K
Sbjct: 231 DITSRHIEGKSLDKTVWNLLNFYAYVKYHIK 261
>ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
isoform X2 [Solanum tuberosum]
Length = 374
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK+LDKTVWNL+NFYAFVK HVK
Sbjct: 238 DITSRHIEGKRLDKTVWNLLNFYAFVKNHVK 268
>ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
isoform X1 [Solanum tuberosum]
Length = 375
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK+LDKTVWNL+NFYAFVK HVK
Sbjct: 239 DITSRHIEGKRLDKTVWNLLNFYAFVKNHVK 269
>ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/3 complex subunit
2-like [Solanum lycopersicum]
Length = 372
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK+LDKTVWNL+NFYAFVK HVK
Sbjct: 236 DITSRHIEGKRLDKTVWNLLNFYAFVKNHVK 266
>gb|EMJ28319.1| hypothetical protein PRUPE_ppa026663mg [Prunus persica]
Length = 365
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HV GK+LDKTVW+L+NFYA+VKYHVK
Sbjct: 238 DISSRHVRGKRLDKTVWSLLNFYAYVKYHVK 268
>ref|XP_002314500.2| hypothetical protein POPTR_0010s07750g [Populus trichocarpa]
gi|550329318|gb|EEF00671.2| hypothetical protein
POPTR_0010s07750g [Populus trichocarpa]
Length = 370
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGKKLDKTVW+L+NFYA+VK HVK
Sbjct: 238 DISSRHVEGKKLDKTVWSLLNFYAYVKNHVK 268
>gb|EOY06156.1| Actin-related protein 2/3 complex subunit 2 [Theobroma cacao]
Length = 412
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK+LDKTVW+L+NFYA+VK+HVK
Sbjct: 282 DISSRHIEGKRLDKTVWSLLNFYAYVKHHVK 312
>ref|NP_001189666.1| actin-related protein C2B [Arabidopsis thaliana]
gi|510437569|sp|F4IVU1.1|ARC2B_ARATH RecName:
Full=Actin-related protein 2/3 complex subunit 2B;
AltName: Full=Actin-related protein C2B; AltName:
Full=Arp2/3 complex 34 kDa subunit; Short=p34-ARC
gi|330253734|gb|AEC08828.1| actin-related protein C2B
[Arabidopsis thaliana]
Length = 374
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + H+EGK+LDKTVWNL+NFYA KYH+K
Sbjct: 239 DITSRHIEGKRLDKTVWNLLNFYACAKYHIK 269
>ref|XP_002528374.1| conserved hypothetical protein [Ricinus communis]
gi|223532242|gb|EEF34046.1| conserved hypothetical
protein [Ricinus communis]
Length = 355
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 190 DIYAHHVEGKKLDKTVWNLINFYAFVKYHVK 282
DI + HVEGKKLDKTVW+L+NFYA+VK HVK
Sbjct: 235 DISSRHVEGKKLDKTVWSLLNFYAYVKNHVK 265