BLASTX nr result
ID: Catharanthus22_contig00044931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044931
(635 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 36 4e-11
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 52 4e-09
gb|ABR67408.1| reverse transcriptase [Cucumis melo subsp. melo] 40 1e-07
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea] 36 9e-07
gb|EOX92867.1| LINE-type retrotransposon LIb DNA, Insertion at t... 35 9e-07
ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [S... 35 9e-07
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo... 36 1e-06
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 42 1e-06
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 35 1e-06
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 35 2e-06
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 34 5e-06
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea] 33 8e-06
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 35.8 bits (81), Expect(4) = 4e-11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 305 WQPFKIKRSKPNISHLLSAGYLNLVAQANTKNANIIKQTLYCF 433
W+P K R+ P++SHL A L L A+A A ++K L F
Sbjct: 878 WKPIKTSRNGPSVSHLFFADDLALFAEATPCQARVMKNCLDLF 920
Score = 33.5 bits (75), Expect(4) = 4e-11
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 190 FSPTFLKQGIKQGDPISPYIFILRME 267
FSP GI+QGDP+SPY+F+L +E
Sbjct: 841 FSPG---NGIRQGDPLSPYLFVLCIE 863
Score = 32.3 bits (72), Expect(4) = 4e-11
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 15 SFLSGRKITDNVIITQEII--FPLAK*KTR 98
SF+ GR ITDN++I QE++ F LAK K R
Sbjct: 754 SFVPGRHITDNIMIAQELMHKFKLAKGKKR 783
Score = 30.8 bits (68), Expect(4) = 4e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 83 KMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAFPQPF 205
K+ KK KI L +A+D L W FIE +L P F
Sbjct: 776 KLAKGKKRMFAWKIDLSKAYDRLNWGFIESVLLEVGLPNSF 816
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 52.4 bits (124), Expect(2) = 4e-09
Identities = 32/117 (27%), Positives = 58/117 (49%)
Frame = +2
Query: 83 KMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAFPQPF*NKESNKVTQFHHISLSYA 262
+ K +K ++L+K+ LE+A+D + W F+E L P+ + VT+ S+S
Sbjct: 122 RRKKGRKGWMLLKLDLEKAYDRIRWEFLEDTLRAVRLPEKWIVWIMQCVTE---PSMSLL 178
Query: 263 WNTNQY**KKIQISWQPFKIKRSKPNISHLLSAGYLNLVAQANTKNANIIKQTLYCF 433
WN + + W+P + + P +SH+ A L L A+A+ +I++ L F
Sbjct: 179 WNEHSI----ARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERF 231
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 3 PLQCSFLSGRKITDNVIITQEIIFPLAK*KTRK 101
P Q SF+SGR DN++I QE + + + K RK
Sbjct: 96 PAQASFISGRLAADNIVIMQEAVHSMRRKKGRK 128
>gb|ABR67408.1| reverse transcriptase [Cucumis melo subsp. melo]
Length = 377
Score = 39.7 bits (91), Expect(3) = 1e-07
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 211 QGIKQGDPISPYIFILRMEY*SILVE 288
+GI QGDPISP+IF+L M+Y S L+E
Sbjct: 181 RGIHQGDPISPFIFVLAMDYLSRLIE 206
Score = 35.8 bits (81), Expect(3) = 1e-07
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 113 LIKIYLEQAFDSLEWSFIEFMLDFTAFP 196
LIK+ LE+AFD + WSFI++ML +P
Sbjct: 122 LIKLDLEKAFDKIRWSFIDYMLLKKGYP 149
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEII 71
Q +F+ GR+ITD ++I E I
Sbjct: 90 QMAFIKGRQITDAILIANEAI 110
>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
Length = 1469
Score = 36.2 bits (82), Expect(3) = 9e-07
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 56 YTRNHFSFSKMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAFP 196
Y NH S + Q K Y +K+ + +AFD LEW F+E +L FP
Sbjct: 930 YELNH-SIKLARRQSKRYGALKLDVSKAFDRLEWPFLEQVLRRHGFP 975
Score = 32.3 bits (72), Expect(3) = 9e-07
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +1
Query: 211 QGIKQGDPISPYIFIL 258
+GI+QGDP+SPY+FIL
Sbjct: 1007 RGIRQGDPMSPYLFIL 1022
Score = 29.6 bits (65), Expect(3) = 9e-07
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEI 68
Q +FLSGR ITDN+++ E+
Sbjct: 913 QAAFLSGRSITDNILLAYEL 932
>gb|EOX92867.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 780
Score = 35.0 bits (79), Expect(3) = 9e-07
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 187 SFSPTFLKQGIKQGDPISPYIFILRME 267
SFSP +G++QGDP+SPY+F+L +E
Sbjct: 676 SFSPY---RGVRQGDPLSPYLFVLCIE 699
Score = 33.9 bits (76), Expect(3) = 9e-07
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +2
Query: 293 IQISWQPFKIKRSKPNISHLLSAGYLNLVAQANTKNANIIKQTLYCFLA 439
+Q W+P K+ R P ISHL A L L A+A+ II L F A
Sbjct: 710 VQGLWKPIKLGRHYPLISHLFFADDLILFAEASVDQMEIINGVLGDFCA 758
Score = 29.3 bits (64), Expect(3) = 9e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEIIFPLAK*KTRKSIIYSLKFIWN 134
Q SF+ R I DNVI+TQE++ + K K +WN
Sbjct: 637 QSSFILERAIIDNVIVTQEVMHSFKRKKG--------KILWN 670
>ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [Sorghum bicolor]
gi|241929198|gb|EES02343.1| hypothetical protein
SORBIDRAFT_03g003583 [Sorghum bicolor]
Length = 564
Score = 35.4 bits (80), Expect(3) = 9e-07
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 187 SFSPTFLKQGIKQGDPISPYIFILRMEY*SILVEKN 294
SF P K+G++QG P+SPY+FIL + SI ++K+
Sbjct: 271 SFHP---KRGVRQGCPLSPYLFILAVNELSICLQKH 303
Score = 31.6 bits (70), Expect(3) = 9e-07
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 86 MKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAFPQPF 205
+K+ K+ L+K+ L +AFD +EW FI L F + F
Sbjct: 208 LKSWKQKAFLLKVDLAKAFDRIEWHFIVSALKRQGFKENF 247
Score = 31.2 bits (69), Expect(3) = 9e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 3 PLQCSFLSGRKITDNVIITQEII 71
P Q +F+ GR I N+II QEII
Sbjct: 181 PTQAAFIQGRHIASNIIIAQEII 203
>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
Length = 1170
Score = 36.2 bits (82), Expect(3) = 1e-06
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 181 LYSFSPTFLKQGIKQGDPISPYIFILRMEY*SILVEKN 294
L FSPT +G++QGDP+SPY+F+L + S +++ N
Sbjct: 489 LEPFSPT---RGLRQGDPLSPYLFLLVADGLSNIIKSN 523
Score = 31.6 bits (70), Expect(3) = 1e-06
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 308 QPFKIKRSKPNISHLLSAGYLNLVAQANTKNANIIKQTLYCF 433
QP K+ R P ISHLL A L +A+T+ A+ I+ L +
Sbjct: 530 QPLKVCRRAPGISHLLFADDSLLFFKADTEQASRIRDVLQMY 571
Score = 30.0 bits (66), Expect(3) = 1e-06
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 20 SIRKKNNR*CNHYTRNHFSFSKMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAF 193
S R + NR CN +N + +K+ L +AFD ++W F++ +++ F
Sbjct: 419 SWRSRKNRKCNRENQN-------------FCALKLDLSKAFDHVDWQFLDGVMERMGF 463
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +2
Query: 305 WQPFKIKRSKPNISHLLSAGYLNLVAQANTKNANIIKQTL--YCFLANYQG*NSTMVNL- 475
W+P + +S P +SHL A L L A+A+ + A+IIK L +C L+ G +S +++
Sbjct: 279 WKPVRASQSGPKVSHLFFADDLMLFAEASPQQASIIKDCLDSFCDLSGLSGWSSKTLSMA 338
Query: 476 -RLNLYTHYIE*VFIFSTSESAPPLT 550
RL L + I++ + PL+
Sbjct: 339 GRLTLVQSVTASIPIYAMQTAKLPLS 364
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 208 KQGIKQGDPISPYIFILRMEY*SILV 285
++GI+QGDP+SPYIF+L ME S L+
Sbjct: 245 QRGIRQGDPLSPYIFVLCMEKLSHLI 270
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 211 QGIKQGDPISPYIFILRMEY*SILVE 288
+G++QGDP+SP++F + MEY S L++
Sbjct: 447 KGLRQGDPMSPFLFAIAMEYLSRLLK 472
Score = 33.5 bits (75), Expect(3) = 1e-06
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 113 LIKIYLEQAFDSLEWSFIEFMLDFTAFPQPF 205
++KI L +A+DS+EW F+E +++ FP F
Sbjct: 388 MLKIDLHKAYDSVEWPFLEQVMEGLGFPDLF 418
Score = 29.3 bits (64), Expect(3) = 1e-06
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEIIFPLAK*KTRKSI 107
Q F+ GRKI DN+I+ E++ K TRK++
Sbjct: 355 QAGFIPGRKIGDNIILAHELV----KAYTRKNV 383
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 35.4 bits (80), Expect(3) = 2e-06
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 187 SFSPTFLKQGIKQGDPISPYIFILRME 267
SF+P ++G++QGDPISPY+F+L +E
Sbjct: 441 SFTP---ERGLRQGDPISPYLFVLCIE 464
Score = 31.6 bits (70), Expect(3) = 2e-06
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 3 PLQCSFLSGRKITDNVIITQEIIFPLAK*KTRK 101
P Q SF+ GR DN+++ QE + + + K RK
Sbjct: 351 PAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRK 383
Score = 29.6 bits (65), Expect(3) = 2e-06
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 83 KMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLD 181
+ K +K ++L+K+ LE+A+D + W F+ L+
Sbjct: 377 RRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLE 409
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 33.9 bits (76), Expect(3) = 5e-06
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEIIFPLAK*KTRKSIIYSL 119
Q F+ GR ITDN+++ QEII + K K +++ L
Sbjct: 316 QSGFVRGRSITDNIMLAQEIIHNIKKPKEGDNVVIKL 352
Score = 33.9 bits (76), Expect(3) = 5e-06
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +1
Query: 211 QGIKQGDPISPYIFILRME 267
+G+KQGDP+SP +FILR+E
Sbjct: 408 RGLKQGDPLSPALFILRVE 426
Score = 27.7 bits (60), Expect(3) = 5e-06
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 110 ILIKIYLEQAFDSLEWSFIEFMLDFTAFPQPF 205
++IK+ + +A+DS+ WSF +L F + F
Sbjct: 348 VVIKLDMAKAYDSVSWSFTCLVLSAMGFGEVF 379
>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
Length = 1255
Score = 32.7 bits (73), Expect(3) = 8e-06
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 56 YTRNHFSFSKMKNQKKYYILIKIYLEQAFDSLEWSFIEFMLDFTAFP 196
Y NH + + + +Y L K+ + +AFD +EW+F+E +L FP
Sbjct: 450 YELNHSIKTSRRGEPRYGAL-KLDVSKAFDRIEWTFLEKVLRCHGFP 495
Score = 32.7 bits (73), Expect(3) = 8e-06
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +1
Query: 211 QGIKQGDPISPYIFIL 258
+GI+QGDP+SPY+FIL
Sbjct: 527 RGIRQGDPLSPYLFIL 542
Score = 29.3 bits (64), Expect(3) = 8e-06
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 9 QCSFLSGRKITDNVIITQEI 68
Q +FLSGR ITDN+++ E+
Sbjct: 433 QAAFLSGRSITDNILMAYEL 452