BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00044787
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]    85   1e-14
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
emb|CBI30601.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein...    72   8e-11
ref|XP_006467747.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006449392.1| hypothetical protein CICLE_v10018358mg [Citr...    67   3e-09
ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...    64   2e-08
gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus pe...    57   2e-06
ref|XP_006838973.1| hypothetical protein AMTR_s00002p00271260 [A...    57   3e-06
ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Popu...    56   6e-06
gb|EPS67673.1| hypothetical protein M569_07097, partial [Genlise...    55   7e-06
ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/112 (46%), Positives = 62/112 (55%)
 Frame = +3

Query: 15  QKRIHQRLHSPSESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCSISIPFSYSKLLSE 194
           QK +HQRLH P +     PKL+      S    Q     N +          SYSKLLS+
Sbjct: 10  QKPLHQRLHLPFKPA---PKLIQTVPQFSEDP-QTTAILNLIDKGNFTPTSVSYSKLLSQ 65

Query: 195 LAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDES 350
              +KSL  GLQIHAH+ KSG S+D   RNHLI LYSKC  F +A  L+DES
Sbjct: 66  CCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDES 117


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 52/112 (46%), Positives = 62/112 (55%)
 Frame = +3

Query: 15  QKRIHQRLHSPSESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCSISIPFSYSKLLSE 194
           QK +HQRLH P +     PKL+      S    Q     N +          SYSKLLS+
Sbjct: 10  QKPLHQRLHLPFKPA---PKLIQTVPQFSQDP-QTTAILNLIDKGNFTPTSVSYSKLLSQ 65

Query: 195 LAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDES 350
              +KSL  GLQIHAH+ KSG S+D   RNHLI LYSKC  F +A  L+DES
Sbjct: 66  CCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDES 117


>ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum lycopersicum]
          Length = 914

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/67 (61%), Positives = 51/67 (76%)
 Frame = +3

Query: 153 SISIPFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAW 332
           SIS   SY+ LLS L+++KSL  GLQIHAHL K G S  SK+RNHL+ LYSKC +F++A 
Sbjct: 33  SISNYISYTNLLSNLSKTKSLTPGLQIHAHLTKLGLSNHSKYRNHLVNLYSKCGIFQYAQ 92

Query: 333 NLLDESP 353
            L+DESP
Sbjct: 93  KLIDESP 99


>ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382025|ref|XP_006357350.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565382027|ref|XP_006357351.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 918

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 47/102 (46%), Positives = 64/102 (62%)
 Frame = +3

Query: 48  SESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCSISIPFSYSKLLSELAQSKSLAQGL 227
           S  C L+   + + +F   S +    + N + S  SIS   SY+ LLS L+++KSL  G 
Sbjct: 5   SRICRLYRSPLHHLQFTLPSPI--FKFQNSLFST-SISNYISYTNLLSHLSKTKSLTPGF 61

Query: 228 QIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDESP 353
           QIHAHL K G S  SK+RNHL+ LYSKC +F++A  L+DESP
Sbjct: 62  QIHAHLTKLGLSNHSKYRNHLVNLYSKCGIFQYAQKLIDESP 103


>emb|CBI30601.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/100 (46%), Positives = 55/100 (55%)
 Frame = +3

Query: 51  ESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCSISIPFSYSKLLSELAQSKSLAQGLQ 230
           E+C   PKL+      S    Q     N +          SYSKLLS+   +KSL  GLQ
Sbjct: 9   ENCQTAPKLIQTVPQFSQDP-QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQ 67

Query: 231 IHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDES 350
           IHAH+ KSG S+D   RNHLI LYSKC  F +A  L+DES
Sbjct: 68  IHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDES 107


>ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 930

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = +3

Query: 165 PFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLD 344
           P SYSKLLS+   SKSL  G+++HAHLIK G S D   RNHL+ LYSKC  F +A  L+D
Sbjct: 53  PISYSKLLSQCVASKSLTSGMELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVD 112

Query: 345 ES 350
           ES
Sbjct: 113 ES 114


>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 946

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 38/66 (57%), Positives = 50/66 (75%)
 Frame = +3

Query: 156 ISIPFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWN 335
           IS+P+ YSKLLS+   +K+ + G+QIHA  IK GS++D K RN LI LY+KC LFR+A  
Sbjct: 67  ISVPY-YSKLLSKCNATKNPSPGMQIHAITIKFGSTKDPKSRNLLISLYAKCKLFRYARK 125

Query: 336 LLDESP 353
           L+DESP
Sbjct: 126 LVDESP 131


>ref|XP_006467747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Citrus sinensis]
          Length = 949

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
 Frame = +3

Query: 12  LQKRIHQRLHSPSESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCS--------ISIP 167
           LQK +HQR++ P +    F +   +    + + +   P S    +V           SIP
Sbjct: 17  LQKNLHQRIYLPFKKP--FSQKTHSKYIQTATIISENPESTSNLNVTHDSNFNFTPTSIP 74

Query: 168 FSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDE 347
             YSKLLS+   SKS+  G +IHAHLI+ G  +D K++N+LI  Y+K   F +A  L+DE
Sbjct: 75  --YSKLLSQCTISKSVNLGKEIHAHLIRFGLLKDPKNKNNLINFYAKLQFFLYARKLVDE 132

Query: 348 SP 353
           SP
Sbjct: 133 SP 134


>ref|XP_006449392.1| hypothetical protein CICLE_v10018358mg [Citrus clementina]
           gi|557552003|gb|ESR62632.1| hypothetical protein
           CICLE_v10018358mg [Citrus clementina]
          Length = 942

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
 Frame = +3

Query: 12  LQKRIHQRLHSPSESCNLFPKLVSNNKFHSGSQLQNIPYSNCVQSVCSIS------IPFS 173
           LQK +HQR++ P +    F +   +    + + +   P S    +V   S          
Sbjct: 10  LQKNLHQRIYLPFKKP--FSQKTHSKYIQTATIISENPESTTNLNVTHDSNFYFTPTSIR 67

Query: 174 YSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDESP 353
           YSKLLS+   SKS+  G +IHAHLI+ G  +D K++N+LI  Y+K   F +A  L+DESP
Sbjct: 68  YSKLLSQCTISKSVNLGKEIHAHLIRFGLLKDPKNKNNLINFYAKLQFFLYARKLVDESP 127


>ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
          Length = 925

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/69 (47%), Positives = 42/69 (60%)
 Frame = +3

Query: 144 SVCSISIPFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFR 323
           S C  + P SY+ LLS    SKSL  G++IHAH+IK G S     RNHL+ +YSK   F 
Sbjct: 40  SQCFTNFPISYNNLLSHCVASKSLNSGMEIHAHMIKFGFSHHPSLRNHLVTIYSKSRRFG 99

Query: 324 HAWNLLDES 350
           +A  L D+S
Sbjct: 100 YARKLFDQS 108


>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
 Frame = +3

Query: 6   ICLQKRIHQRLHSPSESCNL-FPKLVSNNKFHSGSQL---QNIPYSNCVQSVCSISIPFS 173
           ICL   I   L   + +  L F K V  N  H+ +Q+   QNI   +   +  S  I  S
Sbjct: 52  ICLNPGIFMMLIRKTVAQTLYFSKFV--NFIHNPAQINQHQNITTFSS-SNFHSTPISIS 108

Query: 174 YSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDES 350
           YS LL +   SK+   G +IHA +IK G S+D K RN LI LYSKC  F++A  ++DES
Sbjct: 109 YSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKMVDES 167


>gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus persica]
          Length = 858

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 225 LQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDES 350
           +++HAH+I+ G S D   RNHLI LYSKC  FRHA  L+DES
Sbjct: 1   MEVHAHIIRCGCSGDQSIRNHLINLYSKCRFFRHARKLVDES 42


>ref|XP_006838973.1| hypothetical protein AMTR_s00002p00271260 [Amborella trichopoda]
           gi|548841479|gb|ERN01542.1| hypothetical protein
           AMTR_s00002p00271260 [Amborella trichopoda]
          Length = 363

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 40/77 (51%)
 Frame = +3

Query: 123 PYSNCVQSVCSISIPFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHLIKLY 302
           P  N +    S+S P S S LL      +SL+Q  Q+HAHL+K G S D   +N LI+ Y
Sbjct: 23  PNKNHITQTASLSDPHSLSLLLKSCTTIRSLSQATQLHAHLLKLGISSDPYIQNSLIQAY 82

Query: 303 SKCCLFRHAWNLLDESP 353
           S C     A  L D+ P
Sbjct: 83  SACDSLALAHQLFDQMP 99


>ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Populus trichocarpa]
           gi|550337026|gb|EEE92095.2| hypothetical protein
           POPTR_0006s24730g [Populus trichocarpa]
          Length = 602

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/81 (35%), Positives = 44/81 (54%)
 Frame = +3

Query: 111 LQNIPYSNCVQSVCSISIPFSYSKLLSELAQSKSLAQGLQIHAHLIKSGSSEDSKHRNHL 290
           LQ++   + V   C     +S++ LL   ++   L +G+Q+H H++K G  ED   RN L
Sbjct: 79  LQSLVLYSSVLRNCVRPNNYSFTFLLQACSKGLGLVEGVQVHGHVLKLGFGEDVYVRNAL 138

Query: 291 IKLYSKCCLFRHAWNLLDESP 353
           I LYS CC    +  + DESP
Sbjct: 139 IHLYSSCCRTESSKQVFDESP 159


>gb|EPS67673.1| hypothetical protein M569_07097, partial [Genlisea aurea]
          Length = 865

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/44 (63%), Positives = 30/44 (68%)
 Frame = +3

Query: 222 GLQIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDESP 353
           GLQIHA LIK    ED   RNHL+ LY+K   F HA NLLDESP
Sbjct: 1   GLQIHAQLIKLRLVEDRPQRNHLVNLYAKSKFFCHARNLLDESP 44


>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Fragaria vesca subsp. vesca]
          Length = 861

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 228 QIHAHLIKSGSSEDSKHRNHLIKLYSKCCLFRHAWNLLDESP 353
           ++HAHLI+ G S+DS  RNHLI LY+K   F HA NLLD+ P
Sbjct: 5   KVHAHLIRFGFSQDSTFRNHLINLYAKSRFFGHARNLLDQCP 46