BLASTX nr result

ID: Catharanthus22_contig00044692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00044692
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004302298.1| PREDICTED: trafficking protein particle comp...    60   3e-07
ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|22...    57   3e-06
ref|XP_006590264.1| PREDICTED: uncharacterized protein LOC100499...    56   4e-06
ref|NP_001237972.1| uncharacterized protein LOC100499663 [Glycin...    56   4e-06
gb|AFK41770.1| unknown [Lotus japonicus]                               56   6e-06
ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycin...    55   1e-05

>ref|XP_004302298.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Fragaria vesca subsp. vesca]
          Length = 141

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIPLKPHV 296
           P+P CAGIELLQADTFDLHCFQSLTG   F  S P   H+
Sbjct: 52  PVPGCAGIELLQADTFDLHCFQSLTGTKFFVVSEPGTQHM 91


>ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|223525526|gb|EEF28075.1|
           synbindin, putative [Ricinus communis]
          Length = 141

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIPLKPHVSINMNI 278
           P+  C+GIELLQADTFDLHCFQSLTG   F    P  PH+   + +
Sbjct: 52  PVVGCSGIELLQADTFDLHCFQSLTGTKFFVVCEPGTPHMEALLKV 97


>ref|XP_006590264.1| PREDICTED: uncharacterized protein LOC100499663 isoform X1 [Glycine
           max]
          Length = 141

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIPLKPHV 296
           P+  C GIELLQADTFDLHCFQSLTG   F+ S P   H+
Sbjct: 52  PVSGCLGIELLQADTFDLHCFQSLTGTKFFAVSEPGAQHM 91


>ref|NP_001237972.1| uncharacterized protein LOC100499663 [Glycine max]
           gi|255625631|gb|ACU13160.1| unknown [Glycine max]
          Length = 114

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIPLKPHV 296
           P+  C GIELLQADTFDLHCFQSLTG   F+ S P   H+
Sbjct: 25  PVSGCLGIELLQADTFDLHCFQSLTGTKFFAVSEPGAQHM 64


>gb|AFK41770.1| unknown [Lotus japonicus]
          Length = 141

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIP 311
           P+  CAGIELLQADTFDLHCFQSLTG   F  S P
Sbjct: 52  PVSGCAGIELLQADTFDLHCFQSLTGTKFFVVSEP 86


>ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycine max]
           gi|255627205|gb|ACU13947.1| unknown [Glycine max]
          Length = 141

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -3

Query: 415 PIPNCAGIELLQADTFDLHCFQSLTGDCCFSFSIPLKPHV 296
           P+  C GIELLQADTFDLHCFQSLTG   F  S P   H+
Sbjct: 52  PVSGCLGIELLQADTFDLHCFQSLTGTKFFVVSEPGAQHM 91


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