BLASTX nr result

ID: Catharanthus22_contig00044683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00044683
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351939.1| PREDICTED: uncharacterized protein LOC102581...    52   8e-06
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    42   1e-05

>ref|XP_006351939.1| PREDICTED: uncharacterized protein LOC102581206 [Solanum tuberosum]
          Length = 307

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 66  ISWSTIFSFACWHIWLGRNRAIFQTNPSTPKFQDSLNRAIEFTWTNNFFSYSPS 227
           +SW   F FA WHIWL RN  IF  + S       + R +E+ +T  F S +PS
Sbjct: 78  LSWEIYFPFAIWHIWLNRNNNIFHNSNSPISIPTVIARTLEYAFTGKFLSSTPS 131



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +1

Query: 238 SNWMPSLPRYLKLNSDGASLGNPGKSGIGGTIRD 339
           + W P      KLN DG         G+GG  RD
Sbjct: 138 ARWKPPPHGLYKLNFDGFFSAPSLVGGLGGVFRD 171


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 42.0 bits (97), Expect(2) = 1e-05
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 63   HISWSTIFSFACWHIWLGRNRAIFQTNPSTPKFQDSLNRAIEFTWTN 203
            H  W T F+ A WHIW  RN+ +F+   + PKF  + NR +   +TN
Sbjct: 1134 HDYWVTKFTTAFWHIWCSRNKTVFECAVNHPKF--TYNRVVADFFTN 1178



 Score = 32.7 bits (73), Expect(2) = 1e-05
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 244  WMPSLPRYLKLNSDGASLGNPGKSGIGGTIRD 339
            W P    +LKLN+DGA   +   +GIGG  RD
Sbjct: 1198 WKPPHQGFLKLNTDGAWKADWENAGIGGVFRD 1229


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