BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00044509
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    59   5e-07
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    55   7e-06

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = -1

Query: 344 CSHCHRSGHDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGM---QVAGKGRTRRVAG 174
           C+HC ++GHD++  FQL GYPDWWP        R +  GR RG      AG+G T   +G
Sbjct: 147 CTHCGKTGHDVADCFQLKGYPDWWP-------TRQMGRGRGRGRGRNSYAGRGAT---SG 196

Query: 173 TLQYGRAAAGKGRTQLQQQTVGRAID 96
            + Y  A A +  TQ + Q VG  ++
Sbjct: 197 RVHYXNAVA-EADTQEKGQCVGHDVE 221


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
 Frame = -1

Query: 371 RSSSTSNLFCSHCHRSGHDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGR 192
           R    S LFC+HC+R GH+++  F + GYPDWW    NP  ++    GR    + +  GR
Sbjct: 251 RFRDKSTLFCTHCNRKGHEVTQCFLVHGYPDWWL-EQNPQENQPSTRGRGSNGRGSSSGR 309

Query: 191 --------TRRVAGTLQYGRAAA----GKGRTQLQQ 120
                   T R  G     +AAA    G G  Q+ Q
Sbjct: 310 GGNRSSAPTTRGRGRANNAQAAAPTVSGDGNDQIAQ 345