BLASTX nr result
ID: Catharanthus22_contig00044245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044245
(218 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|XP_002301427.2| hypothetical protein POPTR_0002s17640g [Popu... 103 2e-20
ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
emb|CBI40590.3| unnamed protein product [Vitis vinifera] 97 3e-18
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera] 97 3e-18
gb|EOX95636.1| Pentatricopeptide repeat (PPR) superfamily protei... 96 4e-18
ref|XP_004510637.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
gb|ESW07278.1| hypothetical protein PHAVU_010G116300g [Phaseolus... 95 1e-17
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,... 93 4e-17
gb|EXB83859.1| hypothetical protein L484_023466 [Morus notabilis] 92 9e-17
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ... 86 7e-15
gb|EPS66384.1| hypothetical protein M569_08386 [Genlisea aurea] 84 3e-14
ref|NP_196468.1| pentatricopeptide repeat-containing protein [Ar... 83 4e-14
dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana] 83 4e-14
ref|XP_002871343.1| pentatricopeptide repeat-containing protein ... 82 6e-14
ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
>ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum tuberosum]
Length = 508
Score = 108 bits (270), Expect = 7e-22
Identities = 47/71 (66%), Positives = 62/71 (87%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FEFD+Y +TAL+DMYAKM L+ +RKLF+ ++++ +PTWNSLIAGYAKNG++EEA +LFS
Sbjct: 113 FEFDIYTLTALVDMYAKMSLLPSARKLFDEMEMKDVPTWNSLIAGYAKNGNVEEAFKLFS 172
Query: 37 EMPRKNVISWT 5
MP +NVISWT
Sbjct: 173 VMPSRNVISWT 183
>ref|XP_002301427.2| hypothetical protein POPTR_0002s17640g [Populus trichocarpa]
gi|550345235|gb|EEE80700.2| hypothetical protein
POPTR_0002s17640g [Populus trichocarpa]
Length = 514
Score = 103 bits (257), Expect = 2e-20
Identities = 44/72 (61%), Positives = 63/72 (87%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F+FDVYA+TAL++MYAK+G++ L+R++F+ + +R IPTWNSLIAGY+++GDME AL LF
Sbjct: 113 FDFDVYALTALVNMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFK 172
Query: 37 EMPRKNVISWTT 2
MP ++V+SWTT
Sbjct: 173 LMPSRSVVSWTT 184
>ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum lycopersicum]
Length = 508
Score = 103 bits (257), Expect = 2e-20
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FEFD+Y +TAL+DMYAKM L+ +RKLF+ ++++ +P WNSLIAGYAKNG++ EA +LFS
Sbjct: 113 FEFDIYTLTALVDMYAKMSLLPSARKLFDEMEMKDVPIWNSLIAGYAKNGNVVEAFKLFS 172
Query: 37 EMPRKNVISWT 5
MP +NVISWT
Sbjct: 173 VMPSRNVISWT 183
>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/71 (60%), Positives = 60/71 (84%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F D++A+TAL+DMYAK+G++ +R+LF+ + +R IPTWNSLIAGYA++G ME AL LF+
Sbjct: 113 FASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 37 EMPRKNVISWT 5
+MP +NVISWT
Sbjct: 173 KMPVRNVISWT 183
>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/71 (60%), Positives = 60/71 (84%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F D++A+TAL+DMYAK+G++ +R+LF+ + +R IPTWNSLIAGYA++G ME AL LF+
Sbjct: 113 FASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 37 EMPRKNVISWT 5
+MP +NVISWT
Sbjct: 173 KMPVRNVISWT 183
>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F DV+A+TAL+DMYAK+GL+ L+RK F+ + +R +PTWNS+IAGYA+ GD+E AL LF
Sbjct: 113 FGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFR 172
Query: 37 EMPRKNVISWT 5
MP +NV SWT
Sbjct: 173 LMPARNVTSWT 183
>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F DV+A+TAL+DMYAK+GL+ L+RK F+ + +R +PTWNS+IAGYA+ GD+E AL LF
Sbjct: 113 FGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFR 172
Query: 37 EMPRKNVISWT 5
MP +NV SWT
Sbjct: 173 LMPARNVTSWT 183
>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F DV+A+TAL+DMYAK+GL+ L+RK F+ + +R +PTWNS+IAGYA+ GD+E AL LF
Sbjct: 598 FGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFR 657
Query: 37 EMPRKNVISWT 5
MP +NV SWT
Sbjct: 658 LMPARNVTSWT 668
>gb|EOX95636.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 515
Score = 96.3 bits (238), Expect = 4e-18
Identities = 41/72 (56%), Positives = 59/72 (81%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F D YA+TAL+ MYAK+ ++ L+RK+F+ +++R++PTWN+LI+GY+ GDM+EAL LF
Sbjct: 115 FGLDCYALTALLVMYAKLRMLPLARKVFDEMRVRNLPTWNALISGYSMCGDMKEALELFK 174
Query: 37 EMPRKNVISWTT 2
MP KNV+SWTT
Sbjct: 175 SMPEKNVVSWTT 186
>ref|XP_004510637.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cicer arietinum]
Length = 512
Score = 95.5 bits (236), Expect = 6e-18
Identities = 40/72 (55%), Positives = 57/72 (79%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F+ DV+A TAL+DMYAK+G + L+R +F+ + +R +PTWN+++AGY + GDME AL LF
Sbjct: 114 FKHDVFASTALLDMYAKLGSLKLARHVFDEMSVREVPTWNAMMAGYTRFGDMERALELFG 173
Query: 37 EMPRKNVISWTT 2
MP +NV+SWTT
Sbjct: 174 LMPARNVVSWTT 185
>gb|ESW07278.1| hypothetical protein PHAVU_010G116300g [Phaseolus vulgaris]
Length = 510
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/72 (55%), Positives = 58/72 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE D++A TAL+DMY K+G + L+R+LF+ + +R +PTWN++++GYAK GDME AL LF
Sbjct: 114 FEPDLFAATALLDMYCKVGTLGLARQLFDEMPVRGVPTWNAMMSGYAKFGDMEGALELFG 173
Query: 37 EMPRKNVISWTT 2
MP +N++SWTT
Sbjct: 174 LMPTRNLVSWTT 185
>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/72 (55%), Positives = 58/72 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE D++A TAL+DMY K+G + L+RKLF+ + +R +PTWN+++AG+A+ GDM+ AL LF
Sbjct: 114 FEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFR 173
Query: 37 EMPRKNVISWTT 2
MP +NV+SWTT
Sbjct: 174 LMPSRNVVSWTT 185
>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 353
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE DV A+TAL+DMY K+G++ + ++F+ + +R IPTWN+LIAGY++ GDME AL++F
Sbjct: 113 FESDVIALTALVDMYCKLGMVAFAHRVFDEIPVRDIPTWNALIAGYSRCGDMEGALKIFK 172
Query: 37 EMPRKNVISWT 5
MP +NV+SWT
Sbjct: 173 LMPDRNVVSWT 183
>gb|EXB83859.1| hypothetical protein L484_023466 [Morus notabilis]
Length = 513
Score = 91.7 bits (226), Expect = 9e-17
Identities = 37/68 (54%), Positives = 56/68 (82%)
Frame = -2
Query: 208 DVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFSEMP 29
D++A+TAL+DMYAK+G++ +RK F+ ++R PTWNS+++GYA++GDME A LF MP
Sbjct: 119 DIFALTALVDMYAKLGMLDCARKQFDEKRVRGTPTWNSMLSGYARSGDMEGASELFRLMP 178
Query: 28 RKNVISWT 5
++NV+SWT
Sbjct: 179 QRNVVSWT 186
>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521549|gb|AET02003.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 550
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F+ DV+A TAL+DMYAK+G + +R +F+ + ++ + TWN+++AG + GDME AL LF
Sbjct: 110 FKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFW 169
Query: 37 EMPRKNVISWTT 2
MP +NV+SWTT
Sbjct: 170 LMPSRNVVSWTT 181
>gb|EPS66384.1| hypothetical protein M569_08386 [Genlisea aurea]
Length = 486
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLK--IRSIPTWNSLIAGYAKNGDMEEALRL 44
F DVYA TALID YAK+GL+ + F+ + + +PTWN L+ YA+NG +EEA RL
Sbjct: 88 FNRDVYASTALIDTYAKLGLLRSATTAFDEMDDGAKGVPTWNCLLTAYARNGHLEEASRL 147
Query: 43 FSEMPRKNVISWT 5
F EMP +NVISWT
Sbjct: 148 FFEMPSRNVISWT 160
>ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g08510 gi|9759345|dbj|BAB10000.1| unnamed protein
product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis
thaliana] gi|332003930|gb|AED91313.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE D + T LI YAK+G + +R++F+ + R +P WN++I GY + GDM+ A+ LF
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 37 EMPRKNVISWTT 2
MPRKNV SWTT
Sbjct: 173 SMPRKNVTSWTT 184
>dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE D + T LI YAK+G + +R++F+ + R +P WN++I GY + GDM+ A+ LF
Sbjct: 106 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 165
Query: 37 EMPRKNVISWTT 2
MPRKNV SWTT
Sbjct: 166 SMPRKNVTSWTT 177
>ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317180|gb|EFH47602.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 511
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
FE D + TALI YAK+G + +R++F+ + R +P WN++I GY + GDM+ A+ LF
Sbjct: 113 FESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 37 EMPRKNVISWTT 2
MP KNV SWTT
Sbjct: 173 SMPNKNVTSWTT 184
>ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cicer arietinum]
Length = 512
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/69 (50%), Positives = 52/69 (75%)
Frame = -2
Query: 208 DVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFSEMP 29
D+ TALIDMYAK G +R +F+ + +R++ +WN++I GY KNG++E+AL+LF EMP
Sbjct: 120 DIKVGTALIDMYAKCGRAGSARLVFDQMGVRNLVSWNTMIGGYMKNGEIEDALKLFDEMP 179
Query: 28 RKNVISWTT 2
KN +SWT+
Sbjct: 180 MKNAVSWTS 188
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/65 (40%), Positives = 43/65 (66%)
Frame = -2
Query: 217 FEFDVYAVTALIDMYAKMGLMHLSRKLFEGLKIRSIPTWNSLIAGYAKNGDMEEALRLFS 38
F +V +LIDMYA+ G + +R++F+G+ R++ +WNS+I G+A NG +EAL F
Sbjct: 249 FRDNVKVSNSLIDMYARCGCIGFARQVFDGMSQRNLVSWNSIIIGFAVNGHADEALSFFY 308
Query: 37 EMPRK 23
M ++
Sbjct: 309 SMKKE 313