BLASTX nr result
ID: Catharanthus22_contig00044146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044146
(537 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Barts... 58 1e-06
ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]... 58 1e-06
ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) ... 58 1e-06
ref|YP_008578583.1| hypothetical chloroplast protein (chloroplas... 58 1e-06
gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum ro... 58 1e-06
gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata] 58 1e-06
gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus tri... 58 1e-06
gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia] 58 1e-06
gb|AGW04709.1| hypothetical chloroplast protein [Matelea biflora] 58 1e-06
gb|AGW04632.1| hypothetical chloroplast protein [Marsdenia astep... 58 1e-06
gb|AGW04483.1| hypothetical chloroplast protein [Astephanus trif... 58 1e-06
gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericif... 58 1e-06
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 58 1e-06
ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]... 58 1e-06
gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulga... 58 1e-06
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 58 1e-06
gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense] 58 1e-06
ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [... 58 1e-06
ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]... 58 1e-06
ref|YP_635682.1| Ycf2 [Solanum tuberosum] gi|108773191|ref|YP_63... 58 1e-06
>gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Bartsia inaequalis]
gi|576598331|gb|AHH30493.1| hypothetical chloroplast RF2
(chloroplast) [Bartsia inaequalis]
Length = 2269
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 118 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 151
>ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]
gi|568247135|ref|YP_008964094.1| hypothetical
chloroplast RF2 [Ajuga reptans]
gi|558697199|gb|AHA84954.1| hypothetical chloroplast RF2
[Ajuga reptans] gi|558697206|gb|AHA84961.1| hypothetical
chloroplast RF2 [Ajuga reptans]
Length = 2248
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
gi|563940343|ref|YP_008814919.1| hypothetical
chloroplast RF21 (chloroplast) [Aralia undulata]
gi|458599133|gb|AGG38999.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
gi|458599154|gb|AGG39020.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
Length = 2132
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_008578583.1| hypothetical chloroplast protein (chloroplast) [Asclepias nivea]
gi|545719324|ref|YP_008578600.1| hypothetical
chloroplast protein (chloroplast) [Asclepias nivea]
gi|544187096|gb|AGW05034.1| hypothetical chloroplast
protein (chloroplast) [Asclepias nivea]
gi|544187097|gb|AGW05035.1| hypothetical chloroplast
protein (chloroplast) [Asclepias nivea]
Length = 2063
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 124 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 157
>gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum rossicum]
Length = 2067
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 124 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 157
>gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata]
Length = 2308
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus trichostomus]
Length = 2294
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 123 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 156
>gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia]
Length = 2059
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 124 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 157
>gb|AGW04709.1| hypothetical chloroplast protein [Matelea biflora]
Length = 1992
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 121 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 154
>gb|AGW04632.1| hypothetical chloroplast protein [Marsdenia astephanoides]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>gb|AGW04483.1| hypothetical chloroplast protein [Astephanus triflorus]
Length = 2130
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 124 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 157
>gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericifera]
Length = 722
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 124 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 157
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]
gi|552541366|ref|YP_008592551.1| Ycf2 (chloroplast)
[Andrographis paniculata] gi|532164880|gb|AGT79890.1|
Ycf2 (chloroplast) [Andrographis paniculata]
gi|532164899|gb|AGT79909.1| Ycf2 (chloroplast)
[Andrographis paniculata]
Length = 2256
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 118 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 151
>gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulgare]
gi|410176216|gb|AFV61875.1| Ycf2 (chloroplast) [Origanum
vulgare subsp. vulgare]
Length = 2261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense]
Length = 2076
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
gi|459014556|ref|YP_007507174.1| hypothetical
chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
gi|401879785|gb|AFQ30972.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
gi|401879806|gb|AFQ30993.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
gi|573461995|emb|CCQ71664.1| Ycf2 (chloroplast) [Salvia
miltiorrhiza] gi|573462016|emb|CCQ71685.1| Ycf2
(chloroplast) [Salvia miltiorrhiza]
Length = 2283
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]
gi|442743025|ref|YP_007353977.1| Ycf2 protein
(chloroplast) [Tectona grandis]
gi|438687647|emb|CCP47174.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438687666|emb|CCP47196.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688331|emb|CCP47263.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688350|emb|CCP47285.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688455|emb|CCP47352.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688474|emb|CCP47374.1| ycf2
protein (chloroplast) [Tectona grandis]
Length = 2287
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155
>ref|YP_635682.1| Ycf2 [Solanum tuberosum] gi|108773191|ref|YP_635701.1| Ycf2
[Solanum tuberosum] gi|109896306|sp|Q27RY7.1|YCF2_SOLTU
RecName: Full=Protein Ycf2 gi|88656846|gb|ABD47099.1|
hypothetical chloroplast RF2 [Solanum tuberosum]
gi|88656866|gb|ABD47119.1| hypothetical chloroplast RF2
[Solanum tuberosum] gi|329124625|gb|AEB72182.1|
hypothetical chloroplast RF2 (chloroplast) [Solanum
tuberosum] gi|329124644|gb|AEB72201.1| hypothetical
chloroplast RF2 (chloroplast) [Solanum tuberosum]
gi|329124712|gb|AEB72268.1| hypothetical chloroplast RF2
(chloroplast) [Solanum tuberosum]
gi|329124731|gb|AEB72287.1| hypothetical chloroplast RF2
(chloroplast) [Solanum tuberosum]
Length = 2278
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/34 (88%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 TLEKSVGSSNINRLIVSLLYLPK-RRISESCFLN 1
TLE+SVGSSNINRLIVSLLYLPK ++ISESCFLN
Sbjct: 122 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLN 155