BLASTX nr result

ID: Catharanthus22_contig00044086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00044086
         (293 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB61063.1| belongs to the SPOU family of rRNA methylases [Ar...    50   3e-06
gb|EOX96732.1| AGAMOUS-like 26 isoform 2 [Theobroma cacao]             55   8e-06

>gb|AAB61063.1| belongs to the SPOU family of rRNA methylases [Arabidopsis
           thaliana]
          Length = 271

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 69  QIPGNTGCIARSCAASAVGLHLVEV 143
           QIPGNTGCIAR+CAASAVGLHLV V
Sbjct: 90  QIPGNTGCIARTCAASAVGLHLVGV 114



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +1

Query: 238 LNVD--ISAFFLLQPLGFQV 291
           +NVD  I   FLLQPLGFQV
Sbjct: 114 VNVDDLICHLFLLQPLGFQV 133


>gb|EOX96732.1| AGAMOUS-like 26 isoform 2 [Theobroma cacao]
          Length = 194

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 54  FCCTWQIPGNTGCIARSCAASAVGLHLV 137
           F C WQIPGN GCIAR+CAASAVG+HLV
Sbjct: 16  FYCPWQIPGNVGCIARTCAASAVGVHLV 43


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