BLASTX nr result
ID: Catharanthus22_contig00044013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00044013
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 61 1e-09
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 63 2e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 63 2e-09
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 63 2e-09
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 66 5e-09
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 55 2e-08
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A... 55 2e-07
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 53 3e-07
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 53 3e-07
gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao] 59 7e-07
gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [... 54 8e-07
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 47 9e-07
gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus pe... 47 9e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 50 2e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 49 3e-06
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga... 47 4e-06
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 52 5e-06
ref|XP_006599846.1| PREDICTED: putative ribonuclease H protein A... 56 6e-06
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 60.8 bits (146), Expect(2) = 1e-09
Identities = 25/67 (37%), Positives = 44/67 (65%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ LIQ+ +S I + A+Q AK P+ + ++ +NR FLWG+ + ++K+H + VC PK
Sbjct: 52 RLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPK 111
Query: 21 HMGGLGL 1
+G +G+
Sbjct: 112 QLGDIGI 118
Score = 27.3 bits (59), Expect(2) = 1e-09
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
TY + D+V +LSSWK K++S
Sbjct: 27 TYDGIFDQVQSRLSSWKSKVLS 48
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 63.2 bits (152), Expect(2) = 2e-09
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R VL+Q S +T+ + +Q+ +P+ N+I+ R FLWG + RKLHS + +++C P+
Sbjct: 1325 RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 1384
Query: 21 HMGGLGL 1
+ GGLGL
Sbjct: 1385 NEGGLGL 1391
Score = 23.9 bits (50), Expect(2) = 2e-09
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
T++ ++D++ KLSSWK ++
Sbjct: 1300 TFNAVIDKMRTKLSSWKASSLN 1321
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 63.2 bits (152), Expect(2) = 2e-09
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R VL+Q S +T+ + +Q+ +P+ N+I+ R FLWG + RKLHS + +++C P+
Sbjct: 793 RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 852
Query: 21 HMGGLGL 1
+ GGLGL
Sbjct: 853 NEGGLGL 859
Score = 23.9 bits (50), Expect(2) = 2e-09
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
T++ ++D++ KLSSWK ++
Sbjct: 768 TFNAVIDKMRTKLSSWKASSLN 789
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 63.2 bits (152), Expect(2) = 2e-09
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R VL+Q S +T+ + +Q+ +P+ N+I+ R FLWG + RKLHS + +++C P+
Sbjct: 793 RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 852
Query: 21 HMGGLGL 1
+ GGLGL
Sbjct: 853 NEGGLGL 859
Score = 23.9 bits (50), Expect(2) = 2e-09
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
T++ ++D++ KLSSWK ++
Sbjct: 768 TFNAVIDKMRTKLSSWKASSLN 789
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ L+Q+ T++I A+Q AK+P+ + I+ N FLWG+ ++++K+H + VC PK
Sbjct: 340 RLTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPK 399
Query: 21 HMGGLGL 1
H GGLGL
Sbjct: 400 HRGGLGL 406
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 21/67 (31%), Positives = 46/67 (68%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ L+Q+ TS I A+Q AK + + ++++ +NR F+ ++++++++H + +C PK
Sbjct: 358 RLTLVQSVTSAIPMYAMQTAKFHVNLCDKLDKLNRDFILSDVENKKRVHLVNWDTICQPK 417
Query: 21 HMGGLGL 1
++GGLG+
Sbjct: 418 YLGGLGV 424
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
TY+ L D+V K+L SWK K++S
Sbjct: 333 TYAGLFDKVQKRLFSWKSKVLS 354
>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 491
Score = 55.1 bits (131), Expect(2) = 2e-07
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ L Q+ I +Q +++P GV+N+IN + ++F+W ++ RK+ KVC PK
Sbjct: 28 RITLPQSVLQAIPVYTMQTSEIPAGVINKINQICKRFIWSGSNENRKMSLIGWDKVCQPK 87
Query: 21 HMGGLGL 1
GGLGL
Sbjct: 88 LCGGLGL 94
Score = 25.4 bits (54), Expect(2) = 2e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
TY +VD+V K+LS W +S
Sbjct: 3 TYHDIVDKVEKRLSGWNASQLS 24
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = -3
Query: 195 VLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPKHM 16
VLI++ I + + + +P G++++I+++ +F WG D RK+H S +C PK M
Sbjct: 794 VLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSM 853
Query: 15 GGLG 4
GGLG
Sbjct: 854 GGLG 857
Score = 27.3 bits (59), Expect(2) = 3e-07
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMSR 207
T++ + +R+ KKL WK K++SR
Sbjct: 767 TFACIKERIWKKLQGWKEKLLSR 789
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = -3
Query: 195 VLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPKHM 16
VLI+ + + + + K+P+ V+ +I++ +F WG D+RK+H S K+C PK M
Sbjct: 798 VLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCM 857
Query: 15 GGLG 4
GG+G
Sbjct: 858 GGMG 861
Score = 26.9 bits (58), Expect(2) = 3e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 263 LVDRV*KKLSSWKGKMMSR 207
L+DR+ KKL WK K++SR
Sbjct: 775 LLDRMWKKLRGWKEKLLSR 793
>gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao]
Length = 660
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
RV L Q TST+AS +Q +P V +IN +N F+WG++ +RK+H+ + +CLPK
Sbjct: 578 RVSLAQAVTSTMASYIMQTTLLPNNVAMEINKLNMNFIWGQVSGKRKIHAINWHTLCLPK 637
Query: 21 HMGGL 7
+ GL
Sbjct: 638 ELRGL 642
>gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [Prunus persica]
Length = 172
Score = 53.9 bits (128), Expect(2) = 8e-07
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ LIQ+ S+I +Q+AK+P + ++ ++ FLW + K H VCLPK
Sbjct: 77 RITLIQSVASSIPQYTMQMAKLPQALCEDLDKSSKSFLWESSETHHKTHLGKWDTVCLPK 136
Query: 21 HMGGLGL 1
+GGLG+
Sbjct: 137 PLGGLGI 143
Score = 24.6 bits (52), Expect(2) = 8e-07
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 278 ATYSFLVDRV*KKLSSWKGKMMS 210
ATY ++ +V KLS+WK +++S
Sbjct: 51 ATYKGVLVKVQAKLSAWKSQLLS 73
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 47.4 bits (111), Expect(2) = 9e-07
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R+ LI+ S S++ + + +P GV++++ + R FLW ++ +R L + K+ LPK
Sbjct: 785 RITLIKASLSSLPLYFMSLFPIPKGVIDKLVRIQRNFLWSGVEGKRALPLVAWEKLELPK 844
Query: 21 HMGGLGL 1
+GGLG+
Sbjct: 845 ILGGLGI 851
Score = 30.8 bits (68), Expect(2) = 9e-07
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
T+ +VDR+ K+L++WKGKM+S
Sbjct: 760 TWDPIVDRMGKRLATWKGKMLS 781
>gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus persica]
Length = 790
Score = 46.6 bits (109), Expect(2) = 9e-07
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLH 55
R LIQ T++I A+Q K+P+ V N ++ +NR F WG + + K+H
Sbjct: 661 RATLIQAVTASIPIYAMQTTKLPVSVCNDLDRLNRNFFWGSSEKKYKIH 709
Score = 31.6 bits (70), Expect(2) = 9e-07
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
TYS LVD+V +L+SWK K++S
Sbjct: 636 TYSSLVDKVHNRLASWKSKLLS 657
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R LIQ++ S+I +Q K+P + I+ +R FLWGE + +R++H + + K
Sbjct: 795 RATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSK 854
Query: 21 HMGGLGL 1
GGLG+
Sbjct: 855 KEGGLGI 861
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 272 YSFLVDRV*KKLSSWKGKMMS 210
Y +LVDR+ KL+ WK K +S
Sbjct: 771 YQYLVDRINGKLAGWKTKTLS 791
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 48.9 bits (115), Expect(2) = 3e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
R VLI+ I + A+Q +P +++ I M R F WG+ +++R++ + K+ LPK
Sbjct: 798 REVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPK 857
Query: 21 HMGGLGL 1
GGLG+
Sbjct: 858 KEGGLGI 864
Score = 27.3 bits (59), Expect(2) = 3e-06
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 272 YSFLVDRV*KKLSSWKGKMMSR 207
+ + DRV KKL WKGK +S+
Sbjct: 774 FQAIQDRVWKKLKGWKGKYLSQ 795
>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1380
Score = 47.4 bits (111), Expect(2) = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
RV LI++S S++ + + +P V+ QIN + R FLW +R L + + LPK
Sbjct: 785 RVTLIKSSISSLPLYFMSLFPIPRSVIEQINKLQRHFLWSGDRGKRALSQVAWKVIELPK 844
Query: 21 HMGGLGL 1
GGLG+
Sbjct: 845 AFGGLGI 851
Score = 28.5 bits (62), Expect(2) = 4e-06
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
T+ +++R+ KKL SWKG+++S
Sbjct: 760 TWEPILERISKKLDSWKGRLLS 781
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 52.4 bits (124), Expect(2) = 5e-06
Identities = 21/48 (43%), Positives = 36/48 (75%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKL 58
R+ LIQ+ TS I + A+Q K P+ + ++++ +NR FLWG++DD++KL
Sbjct: 364 RLTLIQSVTSAIPNYAMQTTKFPVSLCDRLDKLNRNFLWGDVDDKKKL 411
Score = 23.5 bits (49), Expect(2) = 5e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 275 TYSFLVDRV*KKLSSWKGKMMS 210
TY + +V +LSSWK K+++
Sbjct: 339 TYDAIFYKVQSRLSSWKSKVLN 360
>ref|XP_006599846.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 356
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = -3
Query: 201 RVVLIQTSTSTIASNAIQIAKVPIGVLNQINNMNRQFLWGEMDDQRKLHSTSSSKVCLPK 22
RV LIQ+ ++I + +VP V +++ ++ R+FLWG DQ K+ S VCLPK
Sbjct: 96 RVTLIQSMLTSIPIYLLSFFRVPKSVEDKLVHLQRRFLWGGGPDQNKIARVSWKSVCLPK 155
Query: 21 HMGGLGL 1
GGLGL
Sbjct: 156 EKGGLGL 162