BLASTX nr result
ID: Catharanthus22_contig00044007
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00044007 (293 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 55 2e-11 dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 55 2e-11 dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 55 2e-11 dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 61 4e-11 dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 57 4e-10 ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295... 58 9e-10 ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 58 3e-09 ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 51 9e-09 ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein A... 52 1e-08 gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 48 2e-08 emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 48 3e-08 gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 49 4e-08 gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japo... 49 7e-08 ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group] g... 49 7e-08 gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indi... 48 9e-08 gb|EOY00434.1| Retrotransposon protein, unclassified, putative [... 52 1e-07 emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 50 1e-07 gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 45 1e-07 gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus pe... 60 2e-07 gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] 46 3e-07 >dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 55.5 bits (132), Expect(2) = 2e-11 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILVSVTQA-IPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENT 175 +L+SWK +++ AGR +LV + A +P +MQ LPVS C ++D R FLWG+ NT Sbjct: 1311 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNT 1369 Score = 38.9 bits (89), Expect(2) = 2e-11 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +3 Query: 198 WEHICKPKVDGGLGFRLGKDFNMLF 272 W ICKP+ +GGLG R+ +DFN F Sbjct: 1377 WAEICKPRNEGGLGLRMARDFNRAF 1401 >dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 55.5 bits (132), Expect(2) = 2e-11 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILVSVTQA-IPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENT 175 +L+SWK +++ AGR +LV + A +P +MQ LPVS C ++D R FLWG+ NT Sbjct: 779 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNT 837 Score = 38.9 bits (89), Expect(2) = 2e-11 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +3 Query: 198 WEHICKPKVDGGLGFRLGKDFNMLF 272 W ICKP+ +GGLG R+ +DFN F Sbjct: 845 WAEICKPRNEGGLGLRMARDFNRAF 869 >dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 55.5 bits (132), Expect(2) = 2e-11 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILVSVTQA-IPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENT 175 +L+SWK +++ AGR +LV + A +P +MQ LPVS C ++D R FLWG+ NT Sbjct: 779 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNT 837 Score = 38.9 bits (89), Expect(2) = 2e-11 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +3 Query: 198 WEHICKPKVDGGLGFRLGKDFNMLF 272 W ICKP+ +GGLG R+ +DFN F Sbjct: 845 WAEICKPRNEGGLGLRMARDFNRAF 869 >dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var. sinensis] Length = 255 Score = 61.2 bits (147), Expect(2) = 4e-11 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENT 175 RLN WK +++S AGR +L+ SV QAIP M CF+LP VC +++S+ F WG +E T Sbjct: 24 RLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQKEET 82 Score = 32.0 bits (71), Expect(2) = 4e-11 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFN 263 +I+ W+ +CK K+ GG+GFR + FN Sbjct: 84 KIHWTSWKQLCKSKLRGGMGFRCLQHFN 111 >dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var. sinensis] Length = 255 Score = 57.0 bits (136), Expect(2) = 4e-10 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENT 175 RLN WK + +S AGR +L+ SV QAIP M CF+LP VC +++S+ F W +E T Sbjct: 24 RLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEET 82 Score = 32.7 bits (73), Expect(2) = 4e-10 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFN 263 +I+ W+ +CK K+ GG+GFR + FN Sbjct: 84 KIHWTSWKQLCKSKLQGGMGFRCLQXFN 111 >ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295867 [Fragaria vesca subsp. vesca] Length = 265 Score = 58.2 bits (139), Expect(2) = 9e-10 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRE 169 +L+ WK +++S AG+ IL+ SV AIP M CFKLP+S+C +++S+ F WGY E Sbjct: 120 KLDGWKQKSLSLAGKEILIKSVDLAIPAFPMSCFKLPMSICDEINSVMGNFWWGYTE 176 Score = 30.4 bits (67), Expect(2) = 9e-10 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFNM 266 +I+ + W++I KPK++G +G R FNM Sbjct: 180 KIHWRSWDYISKPKLEGRMGIRDLHHFNM 208 >ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 407 Score = 57.8 bits (138), Expect(2) = 3e-09 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRE 169 RL+SWK + +S AGR L+ SV+ AIP +MQ K PVS+C+ +D L R FLWG E Sbjct: 38 RLSSWKSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRNFLWGDTE 94 Score = 28.9 bits (63), Expect(2) = 3e-09 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +3 Query: 168 KIRVEIYLKVWEHICKPKVDGGLGFRLGKDFN 263 +I+ +++L W+ +C+PK G +G + +D N Sbjct: 94 EIKKKVHLVNWDVVCQPKQLGDIGIKKTEDMN 125 >ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 719 Score = 51.2 bits (121), Expect(2) = 9e-09 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +2 Query: 5 LNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 L+ W + +S AGR LV SVT +IPI +MQ KLP+S+C+ +D FLWG Sbjct: 327 LSGWSSKTLSMAGRLTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWG 379 Score = 33.9 bits (76), Expect(2) = 9e-09 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFN 263 +I+L WE +CKPK GGLG + D N Sbjct: 386 KIHLVNWESVCKPKHRGGLGLKKTADMN 413 >ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 527 Score = 52.4 bits (124), Expect(2) = 1e-08 Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYREN 172 ++ +WK+ +S AGR L+ +V QA+P M CFK P+++C ++D++ F WG ++ Sbjct: 180 KIQNWKLCTLSMAGRETLIKAVAQAVPTFPMHCFKFPITLCNELDAMMANFWWGQHKD 237 Score = 32.3 bits (72), Expect(2) = 1e-08 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFNM 266 +I+ K W+ + +PK GG+GFR K+FN+ Sbjct: 240 KIHWKSWDFLGQPKDRGGMGFRNMKEFNI 268 >gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1656 Score = 47.8 bits (112), Expect(2) = 2e-08 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENTG 178 ++ WK +S AG+ +L+ +V AIP M CFK P ++CK+++ + F WG + G Sbjct: 1384 KVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWGNVDTRG 1443 Score = 36.2 bits (82), Expect(2) = 2e-08 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 183 IYLKVWEHICKPKVDGGLGFRLGKDFN 263 I+ K W+ + +PK DGG+GFR +DFN Sbjct: 1444 IHWKSWDFLARPKKDGGMGFRNLEDFN 1470 >emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana] gi|7268307|emb|CAB78601.1| reverse transcriptase like protein [Arabidopsis thaliana] Length = 929 Score = 48.1 bits (113), Expect(2) = 3e-08 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 RL+ WK ++S AGR L +V +IPI +M LP S+ +++D ++R FLWG Sbjct: 573 RLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWG 626 Score = 35.4 bits (80), Expect(2) = 3e-08 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 186 YLKVWEHICKPKVDGGLGFRLGKDFN 263 +L W+ +C+PK GGLG R KD N Sbjct: 635 HLLSWKKVCRPKAAGGLGLRASKDMN 660 >gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica] Length = 992 Score = 48.9 bits (115), Expect(2) = 4e-08 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILVSVT-QAIPIRSMQCFKLPVSVCKKMDSLTRYFLW 157 +L +WK + +S AG+ IL+ V QAIPI +M CF LP VC+ ++ L F W Sbjct: 420 KLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWW 472 Score = 33.9 bits (76), Expect(2) = 4e-08 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFNM 266 +I+ W+ +C PK +GGLGFR FN+ Sbjct: 480 KIHWMAWDRLCAPKEEGGLGFRNLHAFNL 508 >gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japonica Group] Length = 946 Score = 48.5 bits (114), Expect(2) = 7e-08 Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 RL W +S G+ IL+ +V QAIPI M FKLP SVC + +LTR F WG Sbjct: 341 RLIQWGENYLSVGGKEILIKAVIQAIPIYVMGLFKLPDSVCDDLTNLTRNFWWG 394 Score = 33.5 bits (75), Expect(2) = 7e-08 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 192 KVWEHICKPKVDGGLGFRLGKDFN 263 K W+H+ +PK+ GGLGFR + FN Sbjct: 405 KAWDHLTRPKLCGGLGFRDYRLFN 428 >ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group] gi|255671119|dbj|BAH91820.1| Os02g0636500 [Oryza sativa Japonica Group] Length = 625 Score = 48.5 bits (114), Expect(2) = 7e-08 Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 RL W +S G+ IL+ +V QAIPI M FKLP SVC + +LTR F WG Sbjct: 337 RLIQWGENYLSVGGKEILIKAVIQAIPIYVMGLFKLPDSVCDDLTNLTRNFWWG 390 Score = 33.5 bits (75), Expect(2) = 7e-08 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 192 KVWEHICKPKVDGGLGFRLGKDFN 263 K W+H+ +PK+ GGLGFR + FN Sbjct: 401 KAWDHLTRPKLCGGLGFRDYRLFN 424 >gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indica Group] Length = 725 Score = 48.1 bits (113), Expect(2) = 9e-08 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 RL W +S G+ IL+ +V QAIP+ M FKLP S+C + +LTR F WG Sbjct: 424 RLIQWGENYLSVGGKEILIKAVIQAIPVYVMGLFKLPDSICNDLTNLTRNFWWG 477 Score = 33.5 bits (75), Expect(2) = 9e-08 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 192 KVWEHICKPKVDGGLGFRLGKDFN 263 K W+H+ +PK+ GGLGFR + FN Sbjct: 488 KAWDHLTRPKLCGGLGFRDYRLFN 511 >gb|EOY00434.1| Retrotransposon protein, unclassified, putative [Theobroma cacao] Length = 421 Score = 51.6 bits (122), Expect(2) = 1e-07 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 R+++WK + +S G+ +L+ +V QAIPI M CFKLP ++C ++DS+ + WG Sbjct: 213 RVSNWKSKVLSIVGKEVLIKAVAQAIPIYVMSCFKLPDTLCAEIDSVYARYWWG 266 Score = 30.0 bits (66), Expect(2) = 1e-07 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFNM 266 +I+ K W+ IC K G+GFR K+FN+ Sbjct: 273 KIHWKSWKAICTSKHYEGMGFRNTKNFNL 301 >emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1378 Score = 50.4 bits (119), Expect(2) = 1e-07 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRENTG 178 +L WK + +S AGRA L+ S +IP +MQ KLP S C +D +R FLWG +E Sbjct: 781 KLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKR 840 Query: 179 R 181 R Sbjct: 841 R 841 Score = 30.8 bits (68), Expect(2) = 1e-07 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 183 IYLKVWEHICKPKVDGGLGFRLGKDFNMLF 272 ++L WE+I K K +GGLG R + N F Sbjct: 842 VHLVAWENISKSKKEGGLGIRSMRQANSAF 871 >gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica] Length = 925 Score = 45.4 bits (106), Expect(2) = 1e-07 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILVSVT-QAIPIRSMQCFKLPVSVCKKMDSLTRYFLWG 160 +L W+ + +S AG+ +L+ V Q+IP+ M CF LP +C +++ + F WG Sbjct: 344 KLQGWREQTLSIAGKEVLLKVVAQSIPLYVMNCFLLPQGLCHEIEQMMARFWWG 397 Score = 35.8 bits (81), Expect(2) = 1e-07 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFNM 266 +I+ WE +CK K +GG+GFR + FNM Sbjct: 404 KIHWMRWERLCKAKTEGGMGFRCLQAFNM 432 >gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus persica] Length = 790 Score = 60.5 bits (145), Expect = 2e-07 Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYRE 169 RL SWK + +S AGRA L+ +VT +IPI +MQ KLPVSVC +D L R F WG E Sbjct: 647 RLASWKSKLLSLAGRATLIQAVTASIPIYAMQTTKLPVSVCNDLDRLNRNFFWGSSE 703 >gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] Length = 593 Score = 45.8 bits (107), Expect(2) = 3e-07 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 2 RLNSWKMENIS*AGRAILV-SVTQAIPIRSMQCFKLPVSVCKKMDSLTRYFLWGYREN 172 + SWK+ +S AGR I++ SV Q+I M CF+LP C +++ + F WG N Sbjct: 15 KFGSWKVRTLSRAGREIMIKSVLQSISTYIMGCFELPEGTCDRIEKMMCNFYWGGDRN 72 Score = 34.3 bits (77), Expect(2) = 3e-07 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 180 EIYLKVWEHICKPKVDGGLGFRLGKDFN 263 +++ + WE +C+ K +GGLGFR K+FN Sbjct: 75 KMHWRSWEKLCRSKRNGGLGFRRLKNFN 102