BLASTX nr result

ID: Catharanthus22_contig00043786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00043786
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...    70   3e-10
emb|CBI30650.3| unnamed protein product [Vitis vinifera]               70   3e-10
gb|EPS65444.1| hypothetical protein M569_09332, partial [Genlise...    67   3e-09
ref|XP_004248028.1| PREDICTED: probable ATP-dependent RNA helica...    66   5e-09
ref|XP_006358785.1| PREDICTED: probable ATP-dependent RNA helica...    64   2e-08
gb|EXB88539.1| hypothetical protein L484_008858 [Morus notabilis]      62   6e-08
gb|EXB88532.1| putative ATP-dependent RNA helicase DHX35 [Morus ...    62   6e-08
gb|EOY28091.1| RNA helicase family protein isoform 4 [Theobroma ...    62   6e-08
gb|EOY28088.1| RNA helicase family protein isoform 1 [Theobroma ...    62   6e-08
ref|XP_006467687.1| PREDICTED: probable ATP-dependent RNA helica...    60   3e-07
ref|XP_006449459.1| hypothetical protein CICLE_v10014624mg [Citr...    60   3e-07
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...    58   1e-06
gb|EOY28094.1| ATP-dependent RNA helicase DDX35 isoform 7, parti...    57   2e-06
gb|EOY28092.1| RNA helicase family protein isoform 5, partial [T...    57   2e-06
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...    56   6e-06

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           MS+FWKPG E+PRLLDD++G VLFYS S  SSSG+GY+N+EK
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEK 42


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           MS+FWKPG E+PRLLDD++G VLFYS S  SSSG+GY+N+EK
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEK 42


>gb|EPS65444.1| hypothetical protein M569_09332, partial [Genlisea aurea]
          Length = 691

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANME 311
           M+KFWKPG E+PRL+DD++G VLFY+++  SSS YGYANME
Sbjct: 2   MAKFWKPGAEKPRLVDDEEGGVLFYNSTASSSSRYGYANME 42


>ref|XP_004248028.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Solanum
           lycopersicum]
          Length = 690

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           MS+FWKPG ERPRL+DD++G VL Y+TS  SSSG+GY + EK
Sbjct: 1   MSQFWKPGTERPRLVDDEEGGVLLYATSSSSSSGFGYGSFEK 42


>ref|XP_006358785.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Solanum
           tuberosum]
          Length = 690

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           MS+FWKPG ERPRL+DD++G +L Y+ S  SSSG+GY ++EK
Sbjct: 1   MSQFWKPGTERPRLVDDEEGGILLYTASSSSSSGFGYGSLEK 42


>gb|EXB88539.1| hypothetical protein L484_008858 [Morus notabilis]
          Length = 299

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/42 (59%), Positives = 37/42 (88%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           M +FWKPG E+PRLLDD++G +LF+S+S  SSSG+GY+++E+
Sbjct: 1   MPQFWKPGTEKPRLLDDEEGGLLFFSSSHSSSSGFGYSSIER 42


>gb|EXB88532.1| putative ATP-dependent RNA helicase DHX35 [Morus notabilis]
          Length = 696

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/42 (59%), Positives = 37/42 (88%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTSPISSSGYGYANMEK 314
           M +FWKPG E+PRLLDD++G +LF+S+S  SSSG+GY+++E+
Sbjct: 1   MPQFWKPGTEKPRLLDDEEGGLLFFSSSHSSSSGFGYSSIER 42


>gb|EOY28091.1| RNA helicase family protein isoform 4 [Theobroma cacao]
          Length = 575

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/43 (67%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           M++FWKPG E+PRLLDD++G VLF S+S   SSSGYGYA++EK
Sbjct: 1   MAQFWKPGTEKPRLLDDEEGGVLFLSSSFSSSSSGYGYASIEK 43


>gb|EOY28088.1| RNA helicase family protein isoform 1 [Theobroma cacao]
          Length = 697

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/43 (67%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           M++FWKPG E+PRLLDD++G VLF S+S   SSSGYGYA++EK
Sbjct: 1   MAQFWKPGTEKPRLLDDEEGGVLFLSSSFSSSSSGYGYASIEK 43


>ref|XP_006467687.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like isoform
           X1 [Citrus sinensis]
          Length = 697

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 2/44 (4%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYST--SPISSSGYGYANMEK 314
           MS+FWKPG E+PRLLDD++G V+F S+  S  SS GYGYA++EK
Sbjct: 1   MSQFWKPGAEKPRLLDDEEGGVVFLSSSLSSASSIGYGYASIEK 44


>ref|XP_006449459.1| hypothetical protein CICLE_v10014624mg [Citrus clementina]
           gi|557552070|gb|ESR62699.1| hypothetical protein
           CICLE_v10014624mg [Citrus clementina]
          Length = 618

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 2/44 (4%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYST--SPISSSGYGYANMEK 314
           MS+FWKPG E+PRLLDD++G V+F S+  S  SS GYGYA++EK
Sbjct: 1   MSQFWKPGTEKPRLLDDEEGGVVFLSSSLSSASSIGYGYASIEK 44


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           M++FWKPG E+PRLLDD +G VLF+S+S   SSSG+G+++ EK
Sbjct: 1   MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSSGFGFSSTEK 43


>gb|EOY28094.1| ATP-dependent RNA helicase DDX35 isoform 7, partial [Theobroma
           cacao]
          Length = 599

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = +3

Query: 201 WKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           WKPG E+PRLLDD++G VLF S+S   SSSGYGYA++EK
Sbjct: 1   WKPGTEKPRLLDDEEGGVLFLSSSFSSSSSGYGYASIEK 39


>gb|EOY28092.1| RNA helicase family protein isoform 5, partial [Theobroma cacao]
          Length = 623

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = +3

Query: 201 WKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           WKPG E+PRLLDD++G VLF S+S   SSSGYGYA++EK
Sbjct: 1   WKPGTEKPRLLDDEEGGVLFLSSSFSSSSSGYGYASIEK 39


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +3

Query: 189 MSKFWKPGMERPRLLDDKQGSVLFYSTS-PISSSGYGYANMEK 314
           M+ FWKPG E+P LLDD++G V+F S+S   SSSGYGY ++EK
Sbjct: 1   MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYVSIEK 43


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