BLASTX nr result
ID: Catharanthus22_contig00043756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043756
(457 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB31933.1| Pentatricopeptide repeat-containing protein [Moru... 72 1e-10
ref|XP_002324074.2| pentatricopeptide repeat-containing family p... 69 7e-10
gb|EOY03540.1| Pentatricopeptide repeat (PPR) superfamily protei... 67 2e-09
ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ... 65 9e-09
ref|XP_004489421.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|EMJ18769.1| hypothetical protein PRUPE_ppa020933mg [Prunus pe... 64 3e-08
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar... 62 1e-07
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ... 61 1e-07
ref|XP_006603878.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
gb|ESW23252.1| hypothetical protein PHAVU_004G031500g [Phaseolus... 60 3e-07
ref|XP_006483247.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-07
ref|XP_006438573.1| hypothetical protein CICLE_v10030908mg [Citr... 59 5e-07
ref|XP_004306124.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|EXB63808.1| hypothetical protein L484_021080 [Morus notabilis] 59 7e-07
ref|XP_006400058.1| hypothetical protein EUTSA_v10012971mg [Eutr... 59 7e-07
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japo... 59 7e-07
gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indi... 59 7e-07
>gb|EXB31933.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 753
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVKG 165
SNMY EG H++A+S+R VLK +GIRK PG+S I +GGK+HQF AGD ++ Q G
Sbjct: 688 SNMYTLEGKHEKANSIRHVLKNRGIRKAPGMSSIHVGGKLHQFSAGDKSHPQTTG 742
>ref|XP_002324074.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320120|gb|EEF04207.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 636
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMY EG D+A+SLR +LK KGIRKVPG+S I +GG +HQF AGD ++ K
Sbjct: 465 SNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTK 518
>gb|EOY03540.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 633
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMYA G D+A++LR VLK KGIRKVPG+S I + G+VHQF AGD ++++ +
Sbjct: 462 SNMYALAGKRDQANALRTVLKTKGIRKVPGMSSIHVDGQVHQFSAGDKSHSKTQ 515
>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMYA G +RA+SLR VLK +GI+KVPG+S I +GG+VHQF AGD ++ + +
Sbjct: 461 SNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTR 514
>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 637
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQ 156
SNMYA G ++A+SLR VLK +GI+KVPG+S I + GK+HQF AGD ++T+
Sbjct: 466 SNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTR 517
>ref|XP_004489421.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Cicer arietinum]
Length = 635
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQ 156
SNMYA G D+A+SLR VLK KGI+K PG+S I G++HQF AGD ++T+
Sbjct: 464 SNMYALSGKVDKANSLRKVLKKKGIKKAPGMSSIYADGQLHQFIAGDKSHTR 515
>gb|EMJ18769.1| hypothetical protein PRUPE_ppa020933mg [Prunus persica]
Length = 633
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQ-----VKG 165
SNMYA G D+A+SLR LK +GIRKVPG+S + +G +VHQF AGD ++ Q VK
Sbjct: 462 SNMYALGGKQDKANSLRQDLKNRGIRKVPGMSSVYVGCQVHQFSAGDKSHPQTMEIYVKL 521
Query: 166 NEMVK 180
+EM++
Sbjct: 522 DEMIQ 526
>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMY +EG D AD LRG L+ +GIRK+PGLS I + VH+F +GD ++ + K
Sbjct: 459 SNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTK 512
>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319557|gb|EFH49979.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 623
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMY +EG D AD LRG L+ +GIRK+PGLS I + VH+F +GD ++ + K
Sbjct: 459 SNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTK 512
>ref|XP_006603878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 706
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNY 150
SNMYA G D+A+SLR VLK +GIRKVPG+S I + G++H+F AGD ++
Sbjct: 535 SNMYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSH 584
>gb|ESW23252.1| hypothetical protein PHAVU_004G031500g [Phaseolus vulgaris]
Length = 734
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNY 150
SNM+A G D+A+SLR VLK +GI+KVPG+S I + G++H+F AGD ++
Sbjct: 563 SNMFALSGKPDKANSLRKVLKSRGIKKVPGMSSIYVDGQLHRFIAGDKSH 612
>ref|XP_006483247.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Citrus sinensis]
Length = 619
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVKGNEMV 177
SN+YA N DR ++R ++K KG++K+PG S I++ G+VH+FFAGD + + E++
Sbjct: 457 SNIYAESKNWDRVINVRQIMKAKGVKKLPGCSVIEVDGEVHEFFAGDETHPRYNEIEVM 515
>ref|XP_006438573.1| hypothetical protein CICLE_v10030908mg [Citrus clementina]
gi|557540769|gb|ESR51813.1| hypothetical protein
CICLE_v10030908mg [Citrus clementina]
Length = 661
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVKGNEMV 177
SN+YA N DR ++R ++K KG++K+PG S I++ G+VH+FFAGD + + E++
Sbjct: 499 SNIYAESKNWDRVINVRQIMKAKGVKKLPGCSVIEVDGEVHEFFAGDETHPRYNEIEVM 557
>ref|XP_004306124.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 634
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQ-----VKG 165
SNMYA G D+A+ R LK +GIRK+PG+S + +G +VHQF AGD ++ Q +K
Sbjct: 462 SNMYALGGKKDKANLWRQGLKNRGIRKMPGMSSVYVGDQVHQFSAGDKSHGQTAEIYMKL 521
Query: 166 NEMV---KI*GY 192
NEM+ K+ GY
Sbjct: 522 NEMIQRLKVAGY 533
>gb|EXB63808.1| hypothetical protein L484_021080 [Morus notabilis]
Length = 615
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNY 150
SNMYA N D ++R ++K KG+RK+PG S I++ G+VH+FF GD ++
Sbjct: 453 SNMYADSKNWDGVSNVRQIMKAKGVRKLPGCSVIEVDGEVHEFFVGDKSH 502
>ref|XP_006400058.1| hypothetical protein EUTSA_v10012971mg [Eutrema salsugineum]
gi|557101148|gb|ESQ41511.1| hypothetical protein
EUTSA_v10012971mg [Eutrema salsugineum]
Length = 623
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SNMYA+EG D D LRG ++ +G++K+PG+S I L G +++F +GD ++ + K
Sbjct: 459 SNMYAAEGRSDVVDGLRGSMRNQGLKKIPGMSSIHLNGSIYRFSSGDRSHPRTK 512
>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SN YA+ G D A +RG++K + + K+PG S IQ+G K H FFAGD ++++ K
Sbjct: 764 SNAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTK 817
>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Glycine max]
Length = 748
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVK 162
SN+YAS+G D + +R V+K KG+RK PG S+I++G KVH AGD ++ Q+K
Sbjct: 586 SNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMK 639
>gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVKGNEMVK 180
SN+YA N ++R ++K KG++KVPG S I++GGKVH+FF G + + K EM+
Sbjct: 544 SNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMML 603
Query: 181 I*GYQTLR 204
Q LR
Sbjct: 604 AEMNQRLR 611
>gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +1
Query: 1 SNMYASEGNHDRADSLRGVLKVKGIRKVPGLSFIQLGGKVHQFFAGDNNYTQVKGNEMVK 180
SN+YA N ++R ++K KG++KVPG S I++GGKVH+FF G + + K EM+
Sbjct: 544 SNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMML 603
Query: 181 I*GYQTLR 204
Q LR
Sbjct: 604 AEMNQRLR 611