BLASTX nr result
ID: Catharanthus22_contig00043603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043603
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314202.2| hypothetical protein POPTR_0009s03210g [Popu... 81 2e-13
ref|XP_002311158.2| hypothetical protein POPTR_0008s05000g [Popu... 77 2e-12
ref|XP_002531970.1| 60S ribosomal protein L23a, putative [Ricinu... 76 5e-12
ref|XP_002316310.1| RIBOSOMAL protein L23A [Populus trichocarpa]... 76 5e-12
ref|XP_002284261.1| PREDICTED: 60S ribosomal protein L23a [Vitis... 76 5e-12
ref|XP_006369506.1| hypothetical protein POPTR_0001s24170g [Popu... 75 7e-12
ref|XP_002309429.1| hypothetical protein POPTR_0006s22980g [Popu... 75 7e-12
ref|XP_004307560.1| PREDICTED: 60S ribosomal protein L23a-like [... 75 9e-12
ref|XP_003547452.1| PREDICTED: 60S ribosomal protein L23a-like i... 74 2e-11
ref|NP_001242083.1| uncharacterized protein LOC100778548 [Glycin... 74 2e-11
ref|XP_002311143.1| predicted protein [Populus trichocarpa] 74 2e-11
ref|XP_006363802.1| PREDICTED: 60S ribosomal protein L23a-like i... 74 2e-11
ref|XP_006847938.1| hypothetical protein AMTR_s00029p00132520 [A... 74 2e-11
ref|XP_006295046.1| hypothetical protein CARUB_v10024114mg [Caps... 74 2e-11
gb|EMJ19744.1| hypothetical protein PRUPE_ppa012791mg [Prunus pe... 74 2e-11
gb|EMJ07270.1| hypothetical protein PRUPE_ppa012784mg [Prunus pe... 74 2e-11
ref|XP_003606611.1| 60S ribosomal protein L23a [Medicago truncat... 74 2e-11
gb|ACJ83928.1| unknown [Medicago truncatula] 74 2e-11
ref|XP_006597283.1| PREDICTED: 60S ribosomal protein L23a-like i... 74 3e-11
sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a... 74 3e-11
>ref|XP_002314202.2| hypothetical protein POPTR_0009s03210g [Populus trichocarpa]
gi|566186063|ref|XP_006379008.1| hypothetical protein
POPTR_0009s03210g [Populus trichocarpa]
gi|550330936|gb|EEE88157.2| hypothetical protein
POPTR_0009s03210g [Populus trichocarpa]
gi|550330937|gb|ERP56805.1| hypothetical protein
POPTR_0009s03210g [Populus trichocarpa]
Length = 152
Score = 80.9 bits (198), Expect = 2e-13
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSAS 198
P DS +A+ K A AA V K KK+ + RPR KERNPK SA+
Sbjct: 3 PAKDSLKKADAKAQAVKAARAVKSGPTFKKTKKIRTKVTFHRPRTLKKERNPKYPRISAT 62
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKI 105
>ref|XP_002311158.2| hypothetical protein POPTR_0008s05000g [Populus trichocarpa]
gi|118481483|gb|ABK92684.1| unknown [Populus
trichocarpa] gi|118482744|gb|ABK93290.1| unknown
[Populus trichocarpa] gi|550332450|gb|EEE88525.2|
hypothetical protein POPTR_0008s05000g [Populus
trichocarpa]
Length = 153
Score = 77.0 bits (188), Expect = 2e-12
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +1
Query: 34 DSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSASKRI 207
D++ + + K A AA V K KK+ + RPR KERNPK SA+ R
Sbjct: 7 DASKKPDAKAQAQKAARAVKSGPTFKKTKKIRTKVTFHRPRTLKKERNPKYPRISATPRN 66
Query: 208 ELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
+LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 67 KLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 106
>ref|XP_002531970.1| 60S ribosomal protein L23a, putative [Ricinus communis]
gi|223528367|gb|EEF30406.1| 60S ribosomal protein L23a,
putative [Ricinus communis]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +1
Query: 34 DSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSASKRI 207
D+A + + K A AA V K KK+ + RP+ K+RNPK SA+ R
Sbjct: 18 DAAKKTDAKSQAVKAAKAVKSGTTFKKAKKIRTKVTFHRPKTLKKDRNPKYPRISATPRN 77
Query: 208 ELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
+LD +Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 78 KLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKI 117
>ref|XP_002316310.1| RIBOSOMAL protein L23A [Populus trichocarpa]
gi|566192071|ref|XP_006378736.1| hypothetical protein
POPTR_0010s21740g [Populus trichocarpa]
gi|118483141|gb|ABK93477.1| unknown [Populus
trichocarpa] gi|118484175|gb|ABK93969.1| unknown
[Populus trichocarpa] gi|222865350|gb|EEF02481.1|
RIBOSOMAL protein L23A [Populus trichocarpa]
gi|550330321|gb|ERP56533.1| hypothetical protein
POPTR_0010s21740g [Populus trichocarpa]
Length = 153
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +1
Query: 34 DSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSASKRI 207
D++ + + K A AA V K KK+ + RPR KERNPK SA+ R
Sbjct: 7 DASRKPDPKAQAQKAARAVKSGPTFKKTKKIRTKVTFHRPRTLKKERNPKYPRISATPRN 66
Query: 208 ELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
+LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 67 KLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 106
>ref|XP_002284261.1| PREDICTED: 60S ribosomal protein L23a [Vitis vinifera]
Length = 155
Score = 75.9 bits (185), Expect = 5e-12
Identities = 49/103 (47%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Frame = +1
Query: 31 VDSADEAELKKHAP--GAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSAS 198
VD +A+ K HA A+ A K KK+ S + RPR K+RNPK SA
Sbjct: 6 VDPTKKADPKTHAAKTAKALKSGTATFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRISAP 65
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD +QVLKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 66 SRNKLDQYQVLKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 108
>ref|XP_006369506.1| hypothetical protein POPTR_0001s24170g [Populus trichocarpa]
gi|550348066|gb|ERP66075.1| hypothetical protein
POPTR_0001s24170g [Populus trichocarpa]
Length = 99
Score = 75.5 bits (184), Expect = 7e-12
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Frame = +1
Query: 52 ELKKHAPGAAVHVFYAEKD----KNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIEL 213
+L K + A+ V A K K KK+ + RPR KERNPK SA+ R +L
Sbjct: 2 KLLKKSKARAIKVARAVKSGSTFKKTKKIRTKVTFHRPRTLKKERNPKYPRISATPRNKL 61
Query: 214 DYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
D++Q+LKYPL+TE AM++I NN LVF+VD ADKK I
Sbjct: 62 DHYQILKYPLITESAMKKIEDNNTLVFIVDLGADKKKI 99
>ref|XP_002309429.1| hypothetical protein POPTR_0006s22980g [Populus trichocarpa]
gi|222855405|gb|EEE92952.1| hypothetical protein
POPTR_0006s22980g [Populus trichocarpa]
Length = 155
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +1
Query: 142 RPRISIKERNPKRLSSSASKRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKK 321
RPR KERNPK SA+ R +LD++Q+LKYPL TELAM++I NN LVF+VD ADKK
Sbjct: 47 RPRTLKKERNPKYPRISATPRNKLDHYQILKYPLTTELAMKKIEDNNTLVFIVDIRADKK 106
Query: 322 NI 327
I
Sbjct: 107 KI 108
>ref|XP_004307560.1| PREDICTED: 60S ribosomal protein L23a-like [Fragaria vesca subsp.
vesca]
Length = 152
Score = 75.1 bits (183), Expect = 9e-12
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFYAEK-DKNVKKLAKSNS--RPRISIKERNPKRLSSSA 195
P VDS +A+ K A AA V + K KK+ S + RPR KERNPK SA
Sbjct: 3 PKVDSK-KADPKAQALKAAKAVKSGQTFKKKAKKIRTSVTFHRPRTLKKERNPKYPRISA 61
Query: 196 SKRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 62 PPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 105
>ref|XP_003547452.1| PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Glycine max]
Length = 153
Score = 74.3 bits (181), Expect = 2e-11
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFY-AEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSA 195
P DS +A+ K A A V A K KK+ S + RP+ K+RNPK SA
Sbjct: 3 PKADSLKKADPKAQALKTAKAVKSGATLKKKTKKIRTSVTFHRPKTLKKDRNPKYPRISA 62
Query: 196 SKRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKI 106
>ref|NP_001242083.1| uncharacterized protein LOC100778548 [Glycine max]
gi|255629297|gb|ACU14993.1| unknown [Glycine max]
Length = 153
Score = 74.3 bits (181), Expect = 2e-11
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFY-AEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSA 195
P DS+ +A+ K A A V A K KK+ S + RPR K+RNPK SA
Sbjct: 3 PKADSSKKADPKAQALKTAKAVKSGANFKKKTKKIRTSVTFHRPRTLKKDRNPKYPRISA 62
Query: 196 SKRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LK+PL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PLRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKI 106
>ref|XP_002311143.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +1
Query: 52 ELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIELDYFQ 225
+ K A AA V K KK+ + RPR KERNPK SA+ R +LD++Q
Sbjct: 4 DAKAQAQKAARAVKSGPTFKKTKKIRTKVTFHRPRTLKKERNPKYPRISATPRNKLDHYQ 63
Query: 226 VLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 64 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 97
>ref|XP_006363802.1| PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Solanum
tuberosum]
Length = 230
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Frame = +1
Query: 31 VDSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS----RPRISIKERNPKRLSSSAS 198
VD E + KK A+ V +++ N+ L NS R ++ ERNPK L++S S
Sbjct: 82 VDGRKEGDAKKQRLAYAIKV-KSDESTNMHVLDIQNSVSSERRKMLKMERNPKHLNNSVS 140
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
+R +++Y+QV++YPL TE M IL++N LVFVV K ADKK+I
Sbjct: 141 QRNKIEYYQVIQYPLKTESTMGNILRHNTLVFVVHKDADKKSI 183
>ref|XP_006847938.1| hypothetical protein AMTR_s00029p00132520 [Amborella trichopoda]
gi|548851243|gb|ERN09519.1| hypothetical protein
AMTR_s00029p00132520 [Amborella trichopoda]
Length = 155
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +1
Query: 109 KNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIELDYFQVLKYPLVTELAMREILQNN 282
K KK+ S + RP+ KERNPK SA R +LD++Q+LKYPL TE AM++I NN
Sbjct: 34 KKTKKIRTSVTFHRPKTLTKERNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNN 93
Query: 283 ALVFVVDKHADKKNI 327
LVF+VD ADKK I
Sbjct: 94 TLVFIVDLRADKKKI 108
>ref|XP_006295046.1| hypothetical protein CARUB_v10024114mg [Capsella rubella]
gi|482563754|gb|EOA27944.1| hypothetical protein
CARUB_v10024114mg [Capsella rubella]
Length = 193
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Frame = +1
Query: 31 VDSADEAELKKHAPGAAVHV----FYAEKDKNVKKLAKSNSRPRISIKERNPKRLSSSAS 198
VD+ +A+ K A AA V + +KDK ++ + RP+ K R+PK SA+
Sbjct: 45 VDTTKKADPKAKALKAAKAVKSGQTFKKKDKKIRTKVTFH-RPKTLTKPRDPKYPRISAT 103
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 104 PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKI 146
>gb|EMJ19744.1| hypothetical protein PRUPE_ppa012791mg [Prunus persica]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +1
Query: 109 KNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIELDYFQVLKYPLVTELAMREILQNN 282
K KK+ S + RPR KERNPK SA R +LD++Q+LKYPL TE AM++I NN
Sbjct: 33 KKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNN 92
Query: 283 ALVFVVDKHADKKNI 327
LVF+VD ADKK I
Sbjct: 93 TLVFIVDIRADKKKI 107
>gb|EMJ07270.1| hypothetical protein PRUPE_ppa012784mg [Prunus persica]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +1
Query: 109 KNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIELDYFQVLKYPLVTELAMREILQNN 282
K KK+ S + RPR KERNPK SA R +LD++Q+LKYPL TE AM++I NN
Sbjct: 33 KKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNN 92
Query: 283 ALVFVVDKHADKKNI 327
LVF+VD ADKK I
Sbjct: 93 TLVFIVDIRADKKKI 107
>ref|XP_003606611.1| 60S ribosomal protein L23a [Medicago truncatula]
gi|355507666|gb|AES88808.1| 60S ribosomal protein L23a
[Medicago truncatula] gi|388522973|gb|AFK49548.1|
unknown [Medicago truncatula]
Length = 152
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSAS 198
P D + + + K A AA V K KK+ + + RP+ K+RNPK SA+
Sbjct: 3 PKGDVSKKTDPKAQALKAAKAVKSGTAIKKAKKIRTTVTFHRPKTQTKDRNPKYPRISAT 62
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LK+PL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKI 105
>gb|ACJ83928.1| unknown [Medicago truncatula]
Length = 152
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 PIVDSADEAELKKHAPGAAVHVFYAEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSAS 198
P D + + + K A AA V K KK+ + + RP+ K+RNPK SA+
Sbjct: 3 PKGDVSKKTDPKAQALKAAKAVKSGTAIKKAKKIRTTVTFHRPKTQTKDRNPKYPRISAT 62
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LK+PL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKI 105
>ref|XP_006597283.1| PREDICTED: 60S ribosomal protein L23a-like isoform X2 [Glycine max]
Length = 152
Score = 73.6 bits (179), Expect = 3e-11
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +1
Query: 28 IVDSADEAELKKHAPGAAVHVFY-AEKDKNVKKLAKSNS--RPRISIKERNPKRLSSSAS 198
+ DS +A+ K A A V A K KK+ S + RP+ K+RNPK SA
Sbjct: 3 LADSLKKADPKAQALKTAKAVKSGATLKKKTKKIRTSVTFHRPKTLKKDRNPKYPRISAP 62
Query: 199 KRIELDYFQVLKYPLVTELAMREILQNNALVFVVDKHADKKNI 327
R +LD++Q+LKYPL TE AM++I NN LVF+VD ADKK I
Sbjct: 63 PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKI 105
>sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a
gi|13560777|gb|AAK30202.1|AF349961_1 ribosome protein
L23a [Daucus carota]
Length = 154
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +1
Query: 103 KDKNVKKLAKSNS--RPRISIKERNPKRLSSSASKRIELDYFQVLKYPLVTELAMREILQ 276
K K VKK+ S + RPR K+RNPK SA+ R +LD +Q+LKYPL TE AM++I
Sbjct: 31 KFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIED 90
Query: 277 NNALVFVVDKHADKKNI 327
NN LVF+VD A+KK I
Sbjct: 91 NNTLVFIVDIRANKKKI 107