BLASTX nr result
ID: Catharanthus22_contig00043554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043554
(296 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 207 2e-51
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 206 3e-51
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 204 1e-50
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 203 2e-50
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 202 5e-50
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 202 5e-50
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 201 8e-50
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 199 2e-49
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 199 2e-49
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 199 2e-49
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 187 1e-45
gb|ACB59265.1| replicase [Tulip virus X] 178 6e-43
gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosa... 176 2e-42
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 170 2e-40
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 166 2e-39
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 161 7e-38
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 157 1e-36
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X] 153 3e-35
dbj|BAB83122.1| RNA dependent RNA polymerase [Potato virus X] 153 3e-35
ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp... 151 1e-34
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 207 bits (526), Expect = 2e-51
Identities = 98/98 (100%), Positives = 98/98 (100%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1136 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1195
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT
Sbjct: 1196 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 1233
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 206 bits (523), Expect = 3e-51
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANT 1228
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 204 bits (518), Expect = 1e-50
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
LSPNNIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1119 LSPNNIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNL 1178
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT
Sbjct: 1179 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 1216
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 203 bits (516), Expect = 2e-50
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANT 1228
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 202 bits (513), Expect = 5e-50
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 462 LRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 521
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANT
Sbjct: 522 PEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANT 559
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 202 bits (513), Expect = 5e-50
Identities = 94/98 (95%), Positives = 97/98 (98%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANT 1228
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 201 bits (511), Expect = 8e-50
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANT 1228
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 199 bits (507), Expect = 2e-49
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANT 1228
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 199 bits (507), Expect = 2e-49
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANT 1228
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 199 bits (507), Expect = 2e-49
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL
Sbjct: 1131 LRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 1190
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANT
Sbjct: 1191 PEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANT 1228
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 187 bits (475), Expect = 1e-45
Identities = 86/98 (87%), Positives = 93/98 (94%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNL
Sbjct: 1112 LGPNNIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNL 1171
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PEWVIEGYLDIKL+P+IF GTL+IMRLTGEGPTFDANT
Sbjct: 1172 PEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANT 1209
>gb|ACB59265.1| replicase [Tulip virus X]
Length = 235
Score = 178 bits (452), Expect = 6e-43
Identities = 81/93 (87%), Positives = 89/93 (95%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PNNIMINCE+TP DLSRWV N+WDF+KPSYANDFTAFDQSQDGAMLQFEILKAK+FNL
Sbjct: 143 LGPNNIMINCERTPADLSRWVRNHWDFTKPSYANDFTAFDQSQDGAMLQFEILKAKFFNL 202
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPT 279
PEW+IEGYLDIKL+P+IF GTL+IMRLTGEGPT
Sbjct: 203 PEWIIEGYLDIKLTPQIFTGTLAIMRLTGEGPT 235
>gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
Length = 245
Score = 176 bits (447), Expect = 2e-42
Identities = 81/96 (84%), Positives = 88/96 (91%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PE
Sbjct: 149 PEHIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPE 208
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
WV+EGYLDIKL +IFLGTLSIMRLTGEGPTFDANT
Sbjct: 209 WVLEGYLDIKLDSRIFLGTLSIMRLTGEGPTFDANT 244
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 170 bits (430), Expect = 2e-40
Identities = 79/96 (82%), Positives = 86/96 (89%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PE
Sbjct: 1207 PEHIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPE 1266
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
WV+EGYLDIKL +IFLGTLSIMRLTGE TFDANT
Sbjct: 1267 WVLEGYLDIKLDSRIFLGTLSIMRLTGEYQTFDANT 1302
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 166 bits (421), Expect = 2e-39
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PN+I INCE TP+DLSR++ NYWDF SYANDFTAFDQSQDGAMLQFEILKAK+FN+
Sbjct: 1138 LGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNI 1197
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANT
Sbjct: 1198 PEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANT 1235
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 161 bits (408), Expect = 7e-38
Identities = 76/98 (77%), Positives = 85/98 (86%)
Frame = +1
Query: 1 LSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNL 180
L PN+I INCE TP+DLSR++ NYWDF SYANDFTAFDQSQD AMLQFEILKAK+FN+
Sbjct: 1138 LGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNI 1197
Query: 181 PEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
P +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANT
Sbjct: 1198 PGEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANT 1235
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 157 bits (397), Expect = 1e-36
Identities = 72/96 (75%), Positives = 81/96 (84%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P IMINCEK PQ LS W+ NYW F+ +YANDFT FDQSQDGAMLQFEILKAK+ ++PE
Sbjct: 1461 PPEIMINCEKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPE 1520
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
WV+EGYLDIK + K+F G LSIMRLTGEGPTFDANT
Sbjct: 1521 WVLEGYLDIKTNAKVFSGVLSIMRLTGEGPTFDANT 1556
>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
Length = 1456
Score = 153 bits (386), Expect = 3e-35
Identities = 69/96 (71%), Positives = 82/96 (85%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P + INCE TP+D+S WVLN WDF +PS AND+TAFDQSQDGAMLQFE+LKAK+ +PE
Sbjct: 1210 PKEVFINCETTPEDMSAWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPE 1269
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
+I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANT
Sbjct: 1270 EIIQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANT 1305
>dbj|BAB83122.1| RNA dependent RNA polymerase [Potato virus X]
Length = 1456
Score = 153 bits (386), Expect = 3e-35
Identities = 69/96 (71%), Positives = 82/96 (85%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P + INCE TP+D+S W LN WDFS+PS AND+TAFDQSQDGAMLQFE+LKAK+ +PE
Sbjct: 1210 PKEVFINCETTPEDMSAWALNNWDFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPE 1269
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
+I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANT
Sbjct: 1270 EIIQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANT 1305
>ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp|P15095.1|RDRP_NMV
RecName: Full=RNA replication protein; AltName: Full=186
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222108|dbj|BAA02891.1| 186K
protein [Narcissus mosaic virus]
Length = 1643
Score = 151 bits (381), Expect = 1e-34
Identities = 67/96 (69%), Positives = 84/96 (87%)
Frame = +1
Query: 7 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 186
P+NI INCE TP+DL +++ + WDFS+P++ NDFTAFDQSQDGAMLQFE++KAK+FN+P
Sbjct: 1346 PDNIFINCETTPEDLDKFIKSQWDFSRPAHTNDFTAFDQSQDGAMLQFEVIKAKFFNIPA 1405
Query: 187 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANT 294
+IEGY+ IKL+ IFLGTL IMRL+GEGPTFDANT
Sbjct: 1406 EIIEGYIYIKLNAAIFLGTLGIMRLSGEGPTFDANT 1441