BLASTX nr result
ID: Catharanthus22_contig00043447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043447
(210 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera] 75 3e-19
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera] 71 1e-18
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 70 7e-18
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 70 7e-18
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 70 7e-18
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 67 2e-17
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 71 2e-17
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom... 67 2e-17
gb|AAP43919.1| integrase [Gossypium hirsutum] 68 2e-17
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 69 3e-17
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 67 3e-17
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 70 3e-17
gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [... 74 3e-17
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 69 3e-17
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 69 6e-17
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 70 6e-17
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 69 6e-17
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 69 6e-17
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 69 6e-17
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 6e-17
>emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]
Length = 551
Score = 75.1 bits (183), Expect(2) = 3e-19
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKTI 82
PWQDLS DFVLGLPKTF+G DSI VVVDR SKM HF+ CSKT+
Sbjct: 418 PWQDLSTDFVLGLPKTFKGHDSIFVVVDRFSKMVHFIPCSKTL 460
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -3
Query: 82 NAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ VH A+LFF E+VRLHGLPKTIVSD+
Sbjct: 461 DVVHVAKLFFKEIVRLHGLPKTIVSDQ 487
>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
Length = 665
Score = 71.2 bits (173), Expect(2) = 1e-18
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKTI 82
PWQ+LS+DFVLGLPKTFR DSI V+VDR SKM HF+ CSKT+
Sbjct: 421 PWQELSIDFVLGLPKTFRRHDSIFVMVDRFSKMVHFIPCSKTL 463
Score = 47.0 bits (110), Expect(2) = 1e-18
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -3
Query: 82 NAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+AVH A+LFF E+VRLHGLPKTIVSD+
Sbjct: 464 DAVHVAKLFFKEIVRLHGLPKTIVSDQ 490
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 69.7 bits (169), Expect(2) = 7e-18
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI VVVDR SKMAHF+ C K+
Sbjct: 1266 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 1307
Score = 46.2 bits (108), Expect(2) = 7e-18
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF+E+VRLHG+PKTIVSDR
Sbjct: 1306 KSDDASHIASLFFSEIVRLHGMPKTIVSDR 1335
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 69.7 bits (169), Expect(2) = 7e-18
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI VVVDR SKMAHF+ C K+
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 275
Score = 46.2 bits (108), Expect(2) = 7e-18
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF+E+VRLHG+PKTIVSDR
Sbjct: 274 KSDDASHIASLFFSEIVRLHGMPKTIVSDR 303
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 69.7 bits (169), Expect(2) = 7e-18
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI VVVDR SKMAHF+ C K+
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 275
Score = 46.2 bits (108), Expect(2) = 7e-18
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF+E+VRLHG+PKTIVSDR
Sbjct: 274 KSDDASHIASLFFSEIVRLHGMPKTIVSDR 303
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 67.0 bits (162), Expect(2) = 2e-17
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW D+SMDFV+GLP+T G DSI VVVDR SKMAHF+ C KT
Sbjct: 1454 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKT 1495
Score = 47.8 bits (112), Expect(2) = 2e-17
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A+H A LFF EVVRLHG+PKTIVSDR
Sbjct: 1496 DDAIHIANLFFREVVRLHGMPKTIVSDR 1523
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 71.2 bits (173), Expect(2) = 2e-17
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI VVVDR SKMAHF+ C KT
Sbjct: 1263 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKT 1304
Score = 43.1 bits (100), Expect(2) = 2e-17
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1305 DDASHIADLFFREIVRLHGVPNTIVSDR 1332
Score = 50.4 bits (119), Expect(2) = 1e-08
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 207 WQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
W ++ MDF+ GLPKT G DSI VVVDR++K+A F+ T
Sbjct: 2086 WDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTT 2126
Score = 33.9 bits (76), Expect(2) = 1e-08
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -3
Query: 67 AQLFFNEVVRLHGLPKTIVSDR 2
A+L+F +V LHG+PK IVSDR
Sbjct: 2133 AELYFARIVSLHGVPKKIVSDR 2154
>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 786
Score = 67.0 bits (162), Expect(2) = 2e-17
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW LSMDFVLGLPKT +G DSI VVVDR SKMAHF+ C +T
Sbjct: 539 PWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRT 580
Score = 47.4 bits (111), Expect(2) = 2e-17
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -3
Query: 94 FQDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
F+ +NA H A+LFF E+VRLHG+P +IVSDR
Sbjct: 578 FRTSNATHIAELFFREIVRLHGIPTSIVSDR 608
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 67.8 bits (164), Expect(2) = 2e-17
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW DLSMDF+LGLP+T +G DSI VVVDR SKM+HF+ C KT
Sbjct: 233 PWVDLSMDFILGLPRTKKGRDSIFVVVDRFSKMSHFIPCHKT 274
Score = 46.6 bits (109), Expect(2) = 2e-17
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A H A LFF EVVRLHG+PKTIVSDR
Sbjct: 275 DDATHVADLFFKEVVRLHGIPKTIVSDR 302
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 68.9 bits (167), Expect(2) = 3e-17
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSK 88
PW D+SMDFVLGLP+T RG+DSI VVVDR SKMAHF+ C K
Sbjct: 1310 PWVDISMDFVLGLPRTQRGVDSIFVVVDRFSKMAHFIPCHK 1350
Score = 45.1 bits (105), Expect(2) = 3e-17
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A H ++LFF EVVRLHGLP+TIVSDR
Sbjct: 1352 DDAFHISKLFFKEVVRLHGLPRTIVSDR 1379
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 67.0 bits (162), Expect(2) = 3e-17
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW D+SMDFV+GLP+T G DSI VVVDR SKMAHF+ C KT
Sbjct: 829 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKT 870
Score = 47.0 bits (110), Expect(2) = 3e-17
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A+H A LFF EVVRLHG+PKTIVSDR
Sbjct: 871 DDAMHIANLFFREVVRLHGMPKTIVSDR 898
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 69.7 bits (169), Expect(2) = 3e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DS+ VVVDR SKMAHF+ C KT
Sbjct: 1266 PWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKT 1307
Score = 43.9 bits (102), Expect(2) = 3e-17
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1308 DDATHIADLFFREIVRLHGVPNTIVSDR 1335
>gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 73.9 bits (180), Expect(2) = 3e-17
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSK 88
PW+DLSMDFVLGLPKT RG DSI VVVDR SKMAHFL CSK
Sbjct: 1067 PWKDLSMDFVLGLPKTARGHDSILVVVDRFSKMAHFLPCSK 1107
Score = 39.7 bits (91), Expect(2) = 3e-17
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3
Query: 82 NAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+A + A+LFF EV+RLHGLP +IVSDR
Sbjct: 1110 DASYVAKLFFKEVIRLHGLPVSIVSDR 1136
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 68.9 bits (167), Expect(2) = 3e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI V VDR SKMAHF+ C+K+
Sbjct: 865 PWEDISMDFVLGLPRTRRGRDSIFVAVDRFSKMAHFIPCNKS 906
Score = 44.7 bits (104), Expect(2) = 3e-17
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF EVVRLHG+P+TIVSDR
Sbjct: 905 KSDDASHVADLFFREVVRLHGVPRTIVSDR 934
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 68.6 bits (166), Expect(2) = 6e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DSI VVVDR SKMAHF+ C K+
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332
Score = 44.3 bits (103), Expect(2) = 6e-17
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1331 KSDDATHVADLFFREIVRLHGVPNTIVSDR 1360
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 69.7 bits (169), Expect(2) = 6e-17
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T RG DSI VVVDR SKM HF+ C KT
Sbjct: 1242 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKT 1283
Score = 43.1 bits (100), Expect(2) = 6e-17
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3
Query: 85 NNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1284 DDASHIADLFFREIVRLHGVPNTIVSDR 1311
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 68.6 bits (166), Expect(2) = 6e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DSI VVVDR SKMAHF+ C K+
Sbjct: 1187 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1228
Score = 44.3 bits (103), Expect(2) = 6e-17
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1227 KSDDATHVADLFFREIVRLHGVPNTIVSDR 1256
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 68.6 bits (166), Expect(2) = 6e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DSI VVVDR SKMAHF+ C K+
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332
Score = 44.3 bits (103), Expect(2) = 6e-17
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1331 KSDDATHVADLFFREIVRLHGVPNTIVSDR 1360
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 68.6 bits (166), Expect(2) = 6e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DSI VVVDR SKMAHF+ C K+
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332
Score = 44.3 bits (103), Expect(2) = 6e-17
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 1331 KSDDATHVADLFFREIVRLHGVPNTIVSDR 1360
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 68.6 bits (166), Expect(2) = 6e-17
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -1
Query: 210 PWQDLSMDFVLGLPKTFRGLDSICVVVDRISKMAHFLSCSKT 85
PW+D+SMDFVLGLP+T +G DSI VVVDR SKMAHF+ C K+
Sbjct: 604 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 645
Score = 44.3 bits (103), Expect(2) = 6e-17
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 91 QDNNAVHRAQLFFNEVVRLHGLPKTIVSDR 2
+ ++A H A LFF E+VRLHG+P TIVSDR
Sbjct: 644 KSDDATHVADLFFREIVRLHGVPNTIVSDR 673