BLASTX nr result
ID: Catharanthus22_contig00043436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043436
(204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 69 6e-10
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 69 6e-10
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 69 6e-10
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 69 6e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 69 8e-10
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 69 8e-10
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 69 8e-10
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 67 2e-09
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 67 2e-09
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 67 3e-09
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 65 9e-09
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 64 2e-08
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 64 3e-08
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 63 4e-08
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 62 6e-08
gb|AAT40486.1| putative polyprotein [Solanum demissum] 61 2e-07
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 60 2e-07
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 60 2e-07
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 58 1e-06
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 58 1e-06
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
HD + DKF RKCVFLGYPFGKK WK F L T E SRD F E FPF +
Sbjct: 411 HDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAV 470
Query: 181 NI 186
NI
Sbjct: 471 NI 472
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
HD + DKF RKCVFLGYPFGKK WK F L T E SRD F E FPF +
Sbjct: 744 HDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAV 803
Query: 181 NI 186
NI
Sbjct: 804 NI 805
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 68.9 bits (167), Expect = 6e-10
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 10 RLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFIS 168
R+ KDKF RKC+F+GYPFGKK W+ + L++ E+ SRD +FVE FP+ +
Sbjct: 549 RIEKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVSRDVIFVEPEFPYFN 601
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
HD + DKF RKCVFLGYPFGKK WK F L T E SRD F E FPF +
Sbjct: 497 HDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAV 556
Query: 181 NI 186
NI
Sbjct: 557 NI 558
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
H KDKF R C+F+GYPFG+K WK + L TNEF+ SRD VF E FP+ + D
Sbjct: 742 HRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGD 801
Query: 181 NIQSTAPV 204
I T PV
Sbjct: 802 TIY-TPPV 808
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
HD + DKF RKCVFLGYPFGKK WK F L T E SRD F E FPF +
Sbjct: 456 HDKKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAV 515
Query: 181 NI 186
NI
Sbjct: 516 NI 517
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
H KDKF R C+F+GYPFG+K WK + L TNEF+ SRD VF E FP+ + D
Sbjct: 742 HRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGD 801
Query: 181 NIQSTAPV 204
I T PV
Sbjct: 802 TIY-TPPV 808
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
H KDKF R C+F+GYPFGKK WK + ++ NEFL SRD +F E FP+
Sbjct: 759 HRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVIFREEVFPYAGVNSS 818
Query: 181 NIQSTA 198
+ ST+
Sbjct: 819 TLASTS 824
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 67.0 bits (162), Expect = 2e-09
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFIS 168
HD KDKF RKC+F+GYPFGKK W+ + L++ E+ SR+ +FVE F + +
Sbjct: 555 HDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVSRBVIFVEAEFSYFN 610
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/62 (53%), Positives = 35/62 (56%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
HD + DKF RKCVFLGYPFGKK WK L T E SRD F E FPF +
Sbjct: 624 HDKKSKGDKFASRSRKCVFLGYPFGKKGWKLXDLDTKELFVSRDVKFFEDVFPFGNPGAX 683
Query: 181 NI 186
NI
Sbjct: 684 NI 685
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/55 (58%), Positives = 33/55 (60%)
Frame = +1
Query: 22 DKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARDNI 186
DKF RKCVFLGYPFGKK WK F L T E SRD F E FPF + NI
Sbjct: 448 DKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNI 502
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARD 180
H+ DKF R+CVF+GYP G+K W+ F L+ NEF SRD VF E FPF
Sbjct: 622 HNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRISHEQ 681
Query: 181 NI 186
N+
Sbjct: 682 NV 683
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 19 KDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARDNIQ-ST 195
KDKF R CVF+GYPF +K WK F ++ EFL SRD VF E FP+ + D++ S
Sbjct: 326 KDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLVSRDVVFREDVFPYAATNTDHVSASP 385
Query: 196 APV 204
AP+
Sbjct: 386 APL 388
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 63.2 bits (152), Expect = 4e-08
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +1
Query: 19 KDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPF 162
KDKF R+CVF+GYP+GKK W+ + L+ N+F SRD VF E FP+
Sbjct: 741 KDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVSRDVVFQETVFPY 788
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 22 DKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKA-RDNIQSTA 198
DKF+ GRKC+F+GYP G+K W+ + +++ F SRD VF E FPF K +D S A
Sbjct: 753 DKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFVSRDVVFQEDIFPFADKKNKDTFSSPA 812
Query: 199 PV 204
V
Sbjct: 813 AV 814
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +1
Query: 19 KDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFIS 168
KDKF R+C+FLGYPFGKK W+ + L+T + SRD F E FP+ S
Sbjct: 579 KDKFGSKSRQCIFLGYPFGKKGWRVYDLETGDLYVSRDVTFDEKIFPYAS 628
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +1
Query: 19 KDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARDNIQSTA 198
KDKF RKCVF+GYP GKK W+ + L+T + SRD F E +P+ + + N+
Sbjct: 738 KDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPP 797
Query: 199 P 201
P
Sbjct: 798 P 798
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +1
Query: 19 KDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPFISKARDNIQSTA 198
KDKF RKCVF+GYP GKK W+ + L+T + SRD F E +P+ + + N+
Sbjct: 18 KDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPP 77
Query: 199 P 201
P
Sbjct: 78 P 78
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPF 162
H+ DKF R+CVF+GYP G+K W+ F L+ +F SRD +F E FP+
Sbjct: 522 HNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 1 HDYRLPKDKFRPWGRKCVFLGYPFGKKRWKFFYLQTNEFLTSRDAVFVEYSFPF 162
H+ DKF R+CVF+GYP G+K W+ F L+ +F SRD +F E FP+
Sbjct: 746 HNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 799