BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00043417
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   147   2e-33
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   141   1e-31
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   140   2e-31
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   140   2e-31
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   140   2e-31
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   140   2e-31
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   140   2e-31
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   138   9e-31
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   134   1e-29
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]   134   2e-29
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   133   2e-29
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   133   2e-29
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   133   2e-29
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   133   3e-29
emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]   133   3e-29
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   133   3e-29
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   132   4e-29
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]   132   4e-29
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   132   5e-29
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   131   8e-29

>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  147 bits (370), Expect = 2e-33
 Identities = 74/113 (65%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV  VL  +       F KTVK+V+SDNGT F+CL SYF   G IHQT+  GTPQQNG
Sbjct: 625 KSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYFRENGIIHQTSCVGTPQQNG 684

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNVAR LLFQ  LP  FWGE IL A YLIN TPSS+L G+T YE
Sbjct: 685 RVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYE 737


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  141 bits (355), Expect = 1e-31
 Identities = 65/113 (57%), Positives = 83/113 (73%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SE    LK++ A++   F   +K+V+SDNGT F+C++ YF+ +G  H+T+  GTP QNG
Sbjct: 612 KSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNG 671

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILN+AR L FQ +LP  FWGECIL A YLIN TPS LL GK+ YE
Sbjct: 672 RVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 724


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV  VL  + A     F K+VK+++SDNGT F+CL SYF  +G +HQT+  GTPQQNG
Sbjct: 608 KSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNG 667

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNV+R LLFQ  LP  FWGE ++ A YLIN TPSS+  G + YE
Sbjct: 668 RVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYE 720


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 78/113 (69%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV  VLK +  M+   F K VK+V+SDNGT F+CL   F   G +HQT+  G PQ NG
Sbjct: 421 KNEVACVLKNFIVMVRQQFEKNVKIVRSDNGTKFMCLTKXFAKHGILHQTSCVGXPQXNG 480

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
            VERKHRHILNV R L FQ HLP  FWGEC+L+A YLIN TPS  L GKT YE
Sbjct: 481 HVERKHRHILNVVRALRFQAHLPIEFWGECVLIARYLINXTPSVFLDGKTPYE 533


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV  VL  + A     F K+VK+++SDNGT F+CL SYF  +G +HQT+  GTPQQNG
Sbjct: 608 KSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNG 667

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNV+R LLFQ  LP  FWGE ++ A YLIN TPSS+  G + YE
Sbjct: 668 RVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYE 720


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  140 bits (352), Expect = 2e-31
 Identities = 65/113 (57%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SE    LK++ A++   F   +K V+SDNGT F+C++ YF+ +G  H+T+  GTP QNG
Sbjct: 388 KSETQKHLKDFIALVERQFDTEIKTVRSDNGTEFLCMREYFLHKGITHETSCVGTPHQNG 447

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILN+AR L FQ +LP  FWGECIL A YLIN TPS LL GK+ YE
Sbjct: 448 RVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 500


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  140 bits (352), Expect = 2e-31
 Identities = 65/113 (57%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SE    LK++ A++   F   +K V+SDNGT F+C++ YF+ +G  H+T+  GTP QNG
Sbjct: 388 KSETQKHLKDFMALVERQFDTEIKTVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNG 447

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILN+AR L FQ +LP  FWGECIL A YLIN TPS LL GK+ YE
Sbjct: 448 RVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 500


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  138 bits (347), Expect = 9e-31
 Identities = 68/113 (60%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV  VL  +       F K+VKV++SDNGT F+CL SYF   G +HQT+  GTPQQNG
Sbjct: 186 KSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMCLASYFREHGIVHQTSCVGTPQQNG 245

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNVAR +LFQ  LP  FWGE +L A YLIN TP+SL  G + YE
Sbjct: 246 RVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPYE 298


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/113 (58%), Positives = 81/113 (71%)
 Frame = -2

Query: 340  ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
            ++EV  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNG
Sbjct: 800  KTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNG 859

Query: 160  RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
            RVERKH+HILNV R L FQ +LP  FWGE +L+A +LIN TPS LL  KT +E
Sbjct: 860  RVERKHKHILNVGRALRFQANLPIYFWGESVLVAAHLINRTPSPLLHNKTPFE 912


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score =  134 bits (336), Expect = 2e-29
 Identities = 66/113 (58%), Positives = 79/113 (69%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV   LK++ AMI   F K VK+V+SDNG+ F+CLK YF   G +HQT+  GTP QNG
Sbjct: 521 KNEVGXXLKKFMAMIQWQFQKGVKIVRSDNGSEFMCLKEYFDEIGIVHQTSCVGTPXQNG 580

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RV RKHRHILN+AR L F+ HLP  F GECI   GY IN T S LL GK+ YE
Sbjct: 581 RVXRKHRHILNMARALRFZAHLPHEFXGECIFAXGYSINRTLSMLLNGKSPYE 633


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/113 (58%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNG
Sbjct: 277 KTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNG 336

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKH+HILNV R L FQ +LP  FWGE +L A +LIN TPS LL  KT +E
Sbjct: 337 RVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFE 389


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/113 (58%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNG
Sbjct: 363 KTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNG 422

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKH+HILNV R L FQ +LP  FWGE +L A +LIN TPS LL  KT +E
Sbjct: 423 RVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFE 475


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/113 (58%), Positives = 81/113 (71%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV+ ++K + AM    F K VK  ++DNGT F+CL  YF   G +HQT+   TPQQNG
Sbjct: 598 KTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYFQTHGILHQTSCVDTPQQNG 657

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNVAR  LFQ +LP  FWGE IL A +LIN TPS++L GKT YE
Sbjct: 658 RVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYE 710


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  133 bits (334), Expect = 3e-29
 Identities = 66/113 (58%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           ++EV  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNG
Sbjct: 610 KTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNG 669

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKH+HILNV R L FQ +LP  FWGE +L A +LIN TPS LL  KT +E
Sbjct: 670 RVERKHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFE 722


>emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]
          Length = 616

 Score =  133 bits (334), Expect = 3e-29
 Identities = 65/91 (71%), Positives = 71/91 (78%)
 Frame = -2

Query: 274 VKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNGRVERKHRHILNVARVLLFQVHL 95
           VK+V+SDNG  F+CLK YF   G +HQT+  GTPQQNGRVERKHRHILNVAR L FQ HL
Sbjct: 199 VKIVRSDNGRXFMCLKEYFDXIGIVHQTSCVGTPQQNGRVERKHRHILNVARALXFQAHL 258

Query: 94  PKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           P  F GECIL AGYLIN TPS LL GK+ YE
Sbjct: 259 PLEFRGECILXAGYLINTTPSVLLNGKSPYE 289


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  133 bits (334), Expect = 3e-29
 Identities = 63/106 (59%), Positives = 75/106 (70%)
 Frame = -2

Query: 319 LKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNGRVERKHR 140
           LK + +++   F   +K ++SDNGT FVCL S+FV  G IH+T+  GTPQQNGRVERKHR
Sbjct: 573 LKNFISLVERQFSTKIKTIRSDNGTEFVCLSSFFVDHGIIHETSCVGTPQQNGRVERKHR 632

Query: 139 HILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           HILNVAR L FQ  LP  FW  C L A YLIN TP+ LL GKT +E
Sbjct: 633 HILNVARALRFQARLPIEFWSYCALTAAYLINRTPTPLLQGKTPFE 678


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  132 bits (333), Expect = 4e-29
 Identities = 66/113 (58%), Positives = 82/113 (72%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV  +L+++ AM +  F+K VK V+S+NGT F+ LKSYF  RG +HQ +   T QQNG
Sbjct: 612 KSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYFAERGIVHQISCVYTHQQNG 671

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNVAR LLFQ  LP  FW E +L A YLIN TP+ +L GKT Y+
Sbjct: 672 RVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGKTPYK 724


>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score =  132 bits (333), Expect = 4e-29
 Identities = 66/111 (59%), Positives = 78/111 (70%)
 Frame = -2

Query: 334 EVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNGRV 155
           EV  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNGRV
Sbjct: 506 EVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSXVGTPQQNGRV 565

Query: 154 ERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           ERKH+HILNV R L FQ +LP  FWGE +L A +LIN TPS LL  KT +E
Sbjct: 566 ERKHKHILNVGRALRFQANLPIYFWGESVLXAAHLINRTPSPLLHNKTPFE 616


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/113 (57%), Positives = 80/113 (70%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +++V  +   + AM++  F +TVKVVQSDNGT F CL  YF A G + QT+  GTPQQNG
Sbjct: 322 KTDVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNG 381

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKH+HILNV R L FQ +LP  FWGE +L A +LIN TPS LL  KT +E
Sbjct: 382 RVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFE 434


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  131 bits (330), Expect = 8e-29
 Identities = 66/113 (58%), Positives = 83/113 (73%)
 Frame = -2

Query: 340 ESEVTPVLKEYFAMINT*FHKTVKVVQSDNGTAFVCLKSYFVARGRIHQTTIAGTPQQNG 161
           +SEV+ +++ + AM    F K++K V SDNGT F+CLKS+F  +G IHQT+   T QQNG
Sbjct: 601 KSEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEFMCLKSFFQEQGIIHQTSCVDTRQQNG 660

Query: 160 RVERKHRHILNVARVLLFQVHLPKLFWGECILMAGYLINHTPSSLLGGKTLYE 2
           RVERKHRHILNVAR  LFQ HLP+ F GE IL A +LIN TP+ +L GK+ YE
Sbjct: 661 RVERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGKSPYE 713