BLASTX nr result
ID: Catharanthus22_contig00043292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043292
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat... 64 1e-20
gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein... 64 1e-20
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,... 62 1e-19
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat... 62 2e-18
ref|XP_004488459.1| PREDICTED: putative pentatricopeptide repeat... 59 3e-18
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera] 59 1e-17
gb|EOY12146.1| Tetratricopeptide repeat (TPR)-like superfamily p... 59 2e-17
ref|XP_006366029.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-16
ref|XP_004248466.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-16
ref|XP_006418227.1| hypothetical protein EUTSA_v10007694mg [Eutr... 56 8e-16
gb|ESW21095.1| hypothetical protein PHAVU_005G041300g [Phaseolus... 58 1e-15
ref|XP_002892165.1| pentatricopeptide repeat-containing protein ... 55 1e-15
ref|XP_004306000.1| PREDICTED: putative pentatricopeptide repeat... 57 9e-15
ref|NP_171850.1| pentatricopeptide repeat-containing protein [Ar... 53 1e-14
ref|XP_006306057.1| hypothetical protein CARUB_v10011372mg [Caps... 54 3e-14
gb|EMT19690.1| hypothetical protein F775_17824 [Aegilops tauschii] 51 2e-13
ref|XP_006650908.1| PREDICTED: putative pentatricopeptide repeat... 49 2e-12
ref|XP_004981019.1| PREDICTED: putative pentatricopeptide repeat... 52 3e-12
gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sat... 52 8e-12
gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japo... 52 8e-12
>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Cucumis sativus]
Length = 391
Score = 63.5 bits (153), Expect(2) = 1e-20
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALLGACRIYGELEL +IAGKAL EIEPEN A
Sbjct: 315 AWGALLGACRIYGELELAEIAGKALFEIEPENAA 348
Score = 61.6 bits (148), Expect(2) = 1e-20
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
++NYVLLAK++AS+GR EEAQR+ REMKER VK P SSW V Q
Sbjct: 347 AANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQ 390
>gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein [Cucumis melo
subsp. melo]
Length = 391
Score = 63.5 bits (153), Expect(2) = 1e-20
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALLGACRIYGELEL +IAGKAL EIEPEN A
Sbjct: 315 AWGALLGACRIYGELELAEIAGKALFEIEPENAA 348
Score = 61.6 bits (148), Expect(2) = 1e-20
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
++NYVLLAK++AS+GR EEAQR+ REMKER VK P SSW V Q
Sbjct: 347 AANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQ 390
>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 441
Score = 62.0 bits (149), Expect(2) = 1e-19
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTV 223
+NYVLLA+++AS+GR +EAQRI REMKERGVK +P SSW V
Sbjct: 401 ANYVLLARIYASVGRYDEAQRIRREMKERGVKVSPGSSWVV 441
Score = 60.1 bits (144), Expect(2) = 1e-19
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALLGACR YGE+EL +I G+AL EIEP+NPA
Sbjct: 368 AWGALLGACRTYGEIELAEIVGRALFEIEPDNPA 401
>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
unnamed protein product [Vitis vinifera]
Length = 430
Score = 62.0 bits (149), Expect(2) = 2e-18
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
++NYVLLA+++AS+GR EEAQR+ REM E GVK+AP SSW V Q
Sbjct: 386 AANYVLLARIYASVGRHEEAQRMRREMNEMGVKAAPGSSWVVYQ 429
Score = 55.8 bits (133), Expect(2) = 2e-18
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IAG+AL E+EP+N A
Sbjct: 355 WGALLGACRTYGEVELAEIAGRALFELEPDNAA 387
>ref|XP_004488459.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Cicer arietinum]
Length = 438
Score = 59.3 bits (142), Expect(2) = 3e-18
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALLGACR YGELEL +IAGKAL E+EP+N A
Sbjct: 361 AWGALLGACRNYGELELAEIAGKALVEVEPDNAA 394
Score = 57.8 bits (138), Expect(2) = 3e-18
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTV 223
++NYVLLAK++AS+GR EEA R+ REMKE+GVK SSW V
Sbjct: 393 AANYVLLAKIYASVGRQEEADRMRREMKEKGVKVTSGSSWVV 434
>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
Length = 513
Score = 59.3 bits (142), Expect(2) = 1e-17
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSW 217
++NYVLLA+++AS+GR EEAQR+ REM E GVK+AP SSW
Sbjct: 386 AANYVLLARIYASVGRHEEAQRMRREMNEMGVKAAPGSSW 425
Score = 55.8 bits (133), Expect(2) = 1e-17
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IAG+AL E+EP+N A
Sbjct: 355 WGALLGACRTYGEVELAEIAGRALFELEPDNAA 387
>gb|EOY12146.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 428
Score = 58.9 bits (141), Expect(2) = 2e-17
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
++NYVLLA+++AS+GR EEAQ + EMKERGVK AP SW V Q
Sbjct: 384 AANYVLLARIYASVGRYEEAQGMRMEMKERGVKVAPGGSWVVNQ 427
Score = 55.8 bits (133), Expect(2) = 2e-17
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IAG+AL EIEP N A
Sbjct: 353 WGALLGACRTYGEVELAEIAGRALFEIEPSNAA 385
>ref|XP_006366029.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Solanum tuberosum]
Length = 458
Score = 58.9 bits (141), Expect(2) = 1e-16
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALL +CR YGE+EL +IAG+AL EIEPENPA
Sbjct: 382 AWGALLASCRTYGEVELAEIAGRALFEIEPENPA 415
Score = 53.1 bits (126), Expect(2) = 1e-16
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
+N+V+LA++++S GR EEA+R+ REM +RG+K++P SSW V Q
Sbjct: 415 ANFVILARIYSSNGRFEEAERLRREMIKRGMKTSPGSSWVVHQ 457
>ref|XP_004248466.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Solanum lycopersicum]
Length = 483
Score = 58.5 bits (140), Expect(2) = 1e-16
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALL +CR YGE+EL +IAG+AL E+EPENPA
Sbjct: 407 AWGALLASCRTYGEVELAEIAGRALFEVEPENPA 440
Score = 53.1 bits (126), Expect(2) = 1e-16
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
+N+V+LA++++S GR EEA+++ REM +RG+K+AP SSW V Q
Sbjct: 440 ANFVILARIYSSNGRFEEAEKLRREMIKRGMKTAPGSSWVVHQ 482
>ref|XP_006418227.1| hypothetical protein EUTSA_v10007694mg [Eutrema salsugineum]
gi|557095998|gb|ESQ36580.1| hypothetical protein
EUTSA_v10007694mg [Eutrema salsugineum]
Length = 429
Score = 55.8 bits (133), Expect(2) = 8e-16
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSW 217
+NYVLL K++ S+GR EEA+R+ EMKERGVK +P SSW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRTEMKERGVKVSPGSSW 424
Score = 53.1 bits (126), Expect(2) = 8e-16
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IA L +IEPENPA
Sbjct: 354 WGALLGACRNYGEVELAEIAANELWKIEPENPA 386
>gb|ESW21095.1| hypothetical protein PHAVU_005G041300g [Phaseolus vulgaris]
Length = 431
Score = 58.2 bits (139), Expect(2) = 1e-15
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTV 223
+ N+VLL K++AS+GR EEAQR+ REMKE+GV++A SSW V
Sbjct: 386 AGNFVLLGKMYASVGRMEEAQRVRREMKEKGVRAAAGSSWVV 427
Score = 50.4 bits (119), Expect(2) = 1e-15
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALLGACR +GEL L ++A +AL+E+EP N
Sbjct: 354 AWGALLGACRNFGELRLAEVAARALAEVEPGN 385
>ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338007|gb|EFH68424.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 429
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IA K L +IEPENPA
Sbjct: 354 WGALLGACRNYGEVELAEIAAKELWKIEPENPA 386
Score = 53.5 bits (127), Expect(2) = 1e-15
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSW 217
+NYVLL K++ S+GR EEA+R+ EMKE GVK +P SSW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRMEMKESGVKVSPGSSW 424
>ref|XP_004306000.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Fragaria vesca subsp. vesca]
Length = 429
Score = 57.0 bits (136), Expect(2) = 9e-15
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPENPA 104
AWGALL CR YG LEL +IAG+ALSE+EP+NP+
Sbjct: 354 AWGALLSGCRTYGNLELAEIAGRALSELEPDNPS 387
Score = 48.5 bits (114), Expect(2) = 9e-15
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQ 229
S+Y+LL+ ++ SLGR +EA R+ REM+ +GVK+ SSW V++
Sbjct: 387 SHYLLLSTIYVSLGRHDEAHRMRREMRHKGVKATVGSSWMVQE 429
>ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g03510 gi|9280666|gb|AAF86535.1|AC002560_28
F21B7.13 [Arabidopsis thaliana]
gi|332189459|gb|AEE27580.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 429
Score = 53.1 bits (126), Expect(2) = 1e-14
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IA + L +EPENPA
Sbjct: 354 WGALLGACRNYGEIELAEIAARELLMVEPENPA 386
Score = 51.6 bits (122), Expect(2) = 1e-14
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSW 217
+NYVLL K++ S+GR EEA+R+ +MKE GVK +P SSW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
>ref|XP_006306057.1| hypothetical protein CARUB_v10011372mg [Capsella rubella]
gi|482574768|gb|EOA38955.1| hypothetical protein
CARUB_v10011372mg [Capsella rubella]
Length = 429
Score = 53.9 bits (128), Expect(2) = 3e-14
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +3
Query: 6 WGALLGACRIYGELELGKIAGKALSEIEPENPA 104
WGALLGACR YGE+EL +IA K L IEPENPA
Sbjct: 354 WGALLGACRNYGEVELAEIAAKELWMIEPENPA 386
Score = 50.1 bits (118), Expect(2) = 3e-14
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 101 SNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSW 217
+NYVLL K++ S+GR EEA+ + +MKERGV+ P SSW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAESLRLKMKERGVRVTPGSSW 424
>gb|EMT19690.1| hypothetical protein F775_17824 [Aegilops tauschii]
Length = 361
Score = 51.2 bits (121), Expect(2) = 2e-13
Identities = 20/46 (43%), Positives = 36/46 (78%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQSN 235
+ N+V LA +++ LG EEA+R+ R+M++RG++S+P SSWT+ + +
Sbjct: 266 AGNFVSLANVYSGLGMHEEAERVRRDMEQRGLQSSPGSSWTIHRKS 311
Score = 49.7 bits (117), Expect(2) = 2e-13
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALL ACR YGE+ L ++A +AL EIEPEN
Sbjct: 234 AWGALLAACRKYGEVGLAEVAARALFEIEPEN 265
>ref|XP_006650908.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Oryza brachyantha]
Length = 436
Score = 49.3 bits (116), Expect(2) = 2e-12
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALL CR YGE+ L ++AG+AL E+EPEN
Sbjct: 355 AWGALLAGCRKYGEVGLAEVAGRALFEMEPEN 386
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 18/46 (39%), Positives = 34/46 (73%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQSN 235
+ N+V LA +++ +G +EA+R+ R+M++RGV+ P SSWT+ + +
Sbjct: 387 AGNFVSLANIYSGMGMHDEAERVRRDMEQRGVRRLPGSSWTIHRKS 432
>ref|XP_004981019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Setaria italica]
Length = 436
Score = 52.0 bits (123), Expect(2) = 3e-12
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALL ACR YGE+ L ++AG+AL EIEPEN
Sbjct: 357 AWGALLAACRKYGEVGLAEVAGRALFEIEPEN 388
Score = 45.1 bits (105), Expect(2) = 3e-12
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTVRQSN 235
+ N+V LA +++ G E+A+R+ REM++RGV+ P SSW + +
Sbjct: 389 AGNFVSLANIYSGRGMHEDAERVRREMEQRGVQRLPGSSWMIHHKS 434
>gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|215704803|dbj|BAG94831.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 438
Score = 52.0 bits (123), Expect(2) = 8e-12
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALL ACR YGE+ L ++AG+AL EIEPEN
Sbjct: 357 AWGALLAACRKYGEVGLAEVAGRALFEIEPEN 388
Score = 43.5 bits (101), Expect(2) = 8e-12
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTV 223
+ N+V LA +++ +G ++A+++ REM++RGV+ P SSW +
Sbjct: 389 AGNFVSLANIYSGMGMHDKAEQVRREMEQRGVRRLPGSSWMI 430
>gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japonica Group]
Length = 436
Score = 52.0 bits (123), Expect(2) = 8e-12
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 3 AWGALLGACRIYGELELGKIAGKALSEIEPEN 98
AWGALL ACR YGE+ L ++AG+AL EIEPEN
Sbjct: 357 AWGALLAACRKYGEVGLAEVAGRALFEIEPEN 388
Score = 43.5 bits (101), Expect(2) = 8e-12
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +2
Query: 98 SSNYVLLAKLHASLGRPEEAQRITREMKERGVKSAPRSSWTV 223
+ N+V LA +++ +G ++A+++ REM++RGV+ P SSW +
Sbjct: 389 AGNFVSLANIYSGMGMHDKAEQVRREMEQRGVRRLPGSSWMI 430