BLASTX nr result
ID: Catharanthus22_contig00043088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00043088
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citr... 98 1e-18
gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein... 98 1e-18
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 96 4e-18
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Popu... 95 1e-17
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_004504106.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
gb|ESW18512.1| hypothetical protein PHAVU_006G0477001g, partial ... 90 4e-16
gb|ESW18668.1| hypothetical protein PHAVU_006G0599000g [Phaseolu... 89 5e-16
emb|CBI15551.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ... 87 2e-15
gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis] 87 2e-15
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat... 87 3e-15
ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat... 87 3e-15
ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat... 86 4e-15
gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus pe... 86 4e-15
ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutr... 86 5e-15
>ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citrus clementina]
gi|568883054|ref|XP_006494315.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557554483|gb|ESR64497.1| hypothetical protein
CICLE_v10010361mg [Citrus clementina]
Length = 696
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
V PIRI+KNIR C DCH FMKFAS+IIGR IILRDSNRFHHFVGG CSC D W
Sbjct: 644 VTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
>gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 697
Score = 97.8 bits (242), Expect = 1e-18
Identities = 42/51 (82%), Positives = 43/51 (84%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KNIR C DCH FMKF S IIGR IILRDSNRFHHFVGG CSC DYW
Sbjct: 647 PIRIMKNIRVCGDCHLFMKFVSKIIGRPIILRDSNRFHHFVGGSCSCKDYW 697
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
++PIRIIKNIR C+DCH FMKFAS IIGR IILRDSNRFHHF G+CSCND W
Sbjct: 643 ISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
++PIRIIKNIR C+DCH FMKFAS IIGR IILRDSNRFHHF G+CSCND W
Sbjct: 643 ISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
>ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Populus trichocarpa]
gi|550318380|gb|EEF03583.2| hypothetical protein
POPTR_0018s09280g [Populus trichocarpa]
Length = 695
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
V PIRIIKNIR C+DCH FMKF SNI R +ILRDSNRFHHFV G+CSC DYW
Sbjct: 643 VTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571467711|ref|XP_006584018.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
gi|571467713|ref|XP_006584019.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X3 [Glycine max]
Length = 693
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
VAPIRIIKNIR C DCH FMKFAS I R II+RDSNRFHHF GG+CSCND W
Sbjct: 641 VAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
>ref|XP_004504106.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Cicer arietinum]
gi|502140204|ref|XP_004504107.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Cicer arietinum]
Length = 699
Score = 92.4 bits (228), Expect = 5e-17
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
VAPIRIIKNIR C DCH FMKFAS I R II+RDS+RFHHF+GG CSC D W
Sbjct: 647 VAPIRIIKNIRICDDCHVFMKFASMTIARPIIIRDSSRFHHFIGGSCSCKDLW 699
>gb|ESW18512.1| hypothetical protein PHAVU_006G0477001g, partial [Phaseolus
vulgaris]
Length = 477
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
V PIRIIKNIR C DCH FMKFAS IGR II+RDSNRFHHF G+CSC D W
Sbjct: 425 VEPIRIIKNIRVCDDCHVFMKFASITIGRPIIMRDSNRFHHFFDGKCSCKDNW 477
>gb|ESW18668.1| hypothetical protein PHAVU_006G0599000g [Phaseolus vulgaris]
Length = 592
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +1
Query: 1 VAPIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
+ PIRIIKNIR C DCH FMKFAS IGR II+RDSNRFHHF G+CSC D W
Sbjct: 540 IEPIRIIKNIRVCDDCHVFMKFASITIGRPIIMRDSNRFHHFFDGKCSCKDNW 592
>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIR+IKN+R C DCH MK S I+GR IILRDS+RFHHF GGQCSC DYW
Sbjct: 635 PIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIR+IKN+R C DCH MK S I+GR IILRDS+RFHHF GGQCSC DYW
Sbjct: 716 PIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRIIKN+R C DCH K+ SNI+ R IILRDSNRFHHF GG CSC DYW
Sbjct: 983 PIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH K+ S I+GR IILRDSNRFHHF GG CSC DYW
Sbjct: 1084 PIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
>gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis]
Length = 1398
Score = 87.0 bits (214), Expect = 2e-15
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH K+ S I+GR I+LRDS+RFHHF GGQCSC DYW
Sbjct: 1021 PIRIMKNLRVCGDCHSAFKYISKIVGRKIVLRDSHRFHHFEGGQCSCGDYW 1071
>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
gi|449503335|ref|XP_004161951.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
Length = 629
Score = 87.0 bits (214), Expect = 2e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KNIR C DCH FMK AS ++ + I++RDSNRFHHF+ G CSCNDYW
Sbjct: 579 PIRIMKNIRICVDCHNFMKLASRLLQKEIVIRDSNRFHHFMAGLCSCNDYW 629
>ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum tuberosum]
Length = 1086
Score = 86.7 bits (213), Expect = 3e-15
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH ++ S ++GR I+LRDSNRFHHF G+CSCNDYW
Sbjct: 1036 PIRIMKNLRVCGDCHSAFRYISQVVGRQIVLRDSNRFHHFADGKCSCNDYW 1086
>ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum lycopersicum]
Length = 1086
Score = 86.7 bits (213), Expect = 3e-15
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH ++ S ++GR I+LRDSNRFHHF G+CSCNDYW
Sbjct: 1036 PIRIMKNLRVCGDCHSAFRYISQVVGRQIVLRDSNRFHHFADGKCSCNDYW 1086
>ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cicer arietinum]
Length = 1030
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH K+ S I+ R+IILRDSNRFHHF GG CSC DYW
Sbjct: 980 PIRIMKNLRVCGDCHTAFKYISKIVNRHIILRDSNRFHHFDGGMCSCGDYW 1030
>gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus persica]
Length = 707
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIR+IKN+R C DCH +K+ S I+GR IILRDS+RFHHF GG CSC DYW
Sbjct: 657 PIRVIKNLRVCGDCHNAIKYISKIVGRTIILRDSHRFHHFSGGNCSCGDYW 707
>ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutrema salsugineum]
gi|557115989|gb|ESQ56272.1| hypothetical protein
EUTSA_v10024703mg [Eutrema salsugineum]
Length = 609
Score = 85.9 bits (211), Expect = 5e-15
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 7 PIRIIKNIRFCSDCHFFMKFASNIIGRYIILRDSNRFHHFVGGQCSCNDYW 159
PIRI+KN+R C DCH F+K S I GR II+RD+ RFHHF GG+CSCND+W
Sbjct: 559 PIRIVKNLRVCGDCHVFLKHVSEITGREIIVRDATRFHHFRGGKCSCNDFW 609