BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00043078
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY32759.1| Ribonuclease H protein, putative [Theobroma cacao]      63   5e-08
gb|EOY04279.1| Non-LTR retroelement reverse transcriptase-like [...    60   3e-07
ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06
gb|EOX99776.1| Uncharacterized protein TCM_008691 [Theobroma cacao]    57   2e-06
ref|XP_006493637.1| PREDICTED: putative ribonuclease H protein A...    56   6e-06
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   1e-05

>gb|EOY32759.1| Ribonuclease H protein, putative [Theobroma cacao]
          Length = 337

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/104 (29%), Positives = 55/104 (52%)
 Frame = +1

Query: 7   QKGHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGD 186
           + G WD   ++  +P H++  I  +     +  ++ T W+ ++N  F+   A++   +  
Sbjct: 148 ESGQWDLEYLNQVLPLHIVLRIVAVLIDPKSDKDDATVWIFTSNGEFTVNSAYKSQQVS- 206

Query: 187 TEPQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPTMNLLQ*RRIS 318
           T    S W+ +WK  C+++V LF+W  LHN LPT N L  R +S
Sbjct: 207 TGANSSFWKTIWKLPCSRKVCLFIWRVLHNSLPTGNWLSRRNMS 250


>gb|EOY04279.1| Non-LTR retroelement reverse transcriptase-like [Theobroma cacao]
          Length = 438

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/93 (27%), Positives = 53/93 (56%)
 Frame = +1

Query: 13  GHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGDTE 192
           G+WD   +  E+P++++ +I  +     ++  + + W+ S++  FS +  ++ L   D+ 
Sbjct: 75  GNWDMQILEQELPRNIILMILAVKLDPTSEEGDTSCWIPSSDGRFSIKSTYD-LQRVDSF 133

Query: 193 PQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPTM 291
              + W  +WKT C ++VK+F+W  LH  LPT+
Sbjct: 134 DAETHWSYIWKTVCTRKVKVFIWRILHESLPTL 166


>ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 360

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/104 (31%), Positives = 50/104 (48%)
 Frame = +1

Query: 10  KGHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGDT 189
           +G W+        P HLL  I           ++Y +W  S +E+F+   A+  LS  + 
Sbjct: 219 EGTWNWRLFENLFPHHLLLKIAATKPPSVNDEDDYMYWAYSKSEDFTTNSAYRALSKMEV 278

Query: 190 EPQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPTMNLLQ*RRISD 321
             + S W+++W+ R  QR+K FLW+   NRL T   L  R I D
Sbjct: 279 HNEESFWRILWQWRGPQRIKTFLWVVGQNRLKTKAELFRRHIVD 322


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/105 (28%), Positives = 51/105 (48%)
 Frame = +1

Query: 4   SQKGHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLG 183
           S  G W+  K S  +P   + +I  I         +  +W  S   +F+ + A++ L   
Sbjct: 399 STDGSWNWPKFSHILPHQAVMIIASIHPPSACNGVDQVYWAASPQGDFTVKSAYDLLDQS 458

Query: 184 DTEPQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPTMNLLQ*RRIS 318
             + + S W++ W  +  Q +K+F+WL LHNRL T   L  RR++
Sbjct: 459 RGQERDSYWKIAWSWKGPQSIKIFIWLVLHNRLKTRAELATRRLN 503


>gb|EOX99776.1| Uncharacterized protein TCM_008691 [Theobroma cacao]
          Length = 223

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/92 (28%), Positives = 49/92 (53%)
 Frame = +1

Query: 13  GHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGDTE 192
           G WD  ++   +  H+   I+ +     +  E+  FW  ++N +F+ ++A++   L    
Sbjct: 131 GRWDIDQLQRNLAMHISLKIKAVMVDLLSNEEDMPFWTLTSNGDFTIKLAYDS-QLNRHH 189

Query: 193 PQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPT 288
           P  + WQ +W+   ++ +KLFLW  LH+ LPT
Sbjct: 190 PTANYWQNIWRFTSSREIKLFLWRLLHDSLPT 221


>ref|XP_006493637.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 246

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/104 (30%), Positives = 49/104 (47%)
 Frame = +1

Query: 10  KGHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGDT 189
           +G W+        P HLL  I           ++Y +W  S +E+F+   A+  LS  + 
Sbjct: 105 EGTWNWRLFENLFPHHLLLKIAATKPPSVNDEDDYMYWAYSKSEDFTTNSAYRALSKMEV 164

Query: 190 EPQLSRWQMVWKTRCNQRVKLFLWLSLHNRLPTMNLLQ*RRISD 321
             + S W+++W+ R  Q +K FLW+   NRL T   L  R I D
Sbjct: 165 HNEESFWRILWQWRGPQHIKTFLWVVGQNRLKTKAELFRRHIVD 208


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +1

Query: 7    QKGHWDSSKISFEIPKHLLRVIQGIPRSKHTQLENYTFWVGSTNENFSNQIAHEKLSLGD 186
            ++G WD+ KIS  +P  +L+ I+ IP +  +++E+   W    N  FS + A+  ++  +
Sbjct: 970  KRGRWDTKKISHLLPPDILKQIKEIPLASMSEVEDDFTWNFEKNGTFSVKSAYYLINRRE 1029

Query: 187  TEP-QLSRWQMVWKTRCNQRVKLFLWLSLHNRLPT 288
             E      W+ +W+     + KL +W  +HN LPT
Sbjct: 1030 EETGGKGSWRGLWRKNIPFKYKLLIWNGIHNILPT 1064