BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00043059
         (239 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta...   105   6e-21
gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus pe...   101   9e-20
ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002322694.1| pentatricopeptide repeat-containing family p...    93   4e-17
ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [S...    92   9e-17
ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [A...    91   2e-16
ref|XP_002870540.1| pentatricopeptide repeat-containing protein ...    91   2e-16
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe...    90   3e-16
ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutr...    89   6e-16
gb|EXC27672.1| hypothetical protein L484_009695 [Morus notabilis]      89   8e-16
ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily...    89   8e-16
ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar...    89   8e-16
tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family pr...    89   8e-16
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [S...    89   8e-16
gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indi...    89   8e-16
ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group] g...    89   8e-16

>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 790

 Score =  105 bits (262), Expect = 6e-21
 Identities = 49/78 (62%), Positives = 62/78 (79%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLL RAG LE AY+LV+ +    +A+A+ ALLAACR+H NT +GE IG+RLL+LEP 
Sbjct: 683 CIVDLLCRAGRLEVAYDLVRLLPERQSATALSALLAACRMHWNTEMGEVIGNRLLDLEPD 742

Query: 57  SPGVYNLVSNLYAEQERW 4
           +P VYNLVSNLYAE  +W
Sbjct: 743 NPSVYNLVSNLYAESGKW 760


>gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus persica]
          Length = 751

 Score =  101 bits (252), Expect = 9e-20
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLLSRAG LEEAY LVK + S   AS +R LLAAC+VHGNT +GE +G RLL+L+P+
Sbjct: 646 CMVDLLSRAGLLEEAYNLVKSLPSGLTASTVRTLLAACKVHGNTEIGEILGRRLLDLDPE 705

Query: 57  SPGVYNLVSNLYAEQERW 4
           +  V+ +VSNLYAE  +W
Sbjct: 706 NSSVFAMVSNLYAEGGKW 723


>ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like isoform X1 [Setaria italica]
           gi|514818548|ref|XP_004983976.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21300-like isoform X2 [Setaria italica]
          Length = 802

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLLSRAGHLEE Y+L+K  + +  +S + ALL+ACR HGNT LG+ I + LLELE Q
Sbjct: 691 CIVDLLSRAGHLEEGYKLIKLSTLNDRSSVLCALLSACRNHGNTMLGQIISNELLELEQQ 750

Query: 57  SPGVYNLVSNLYAEQERW 4
           +PG Y L+S ++A++ +W
Sbjct: 751 NPGTYALISEVFAQKGQW 768


>ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Fragaria vesca subsp. vesca]
          Length = 819

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/78 (57%), Positives = 58/78 (74%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLLSRAG LEEAY LVK + S    S +  LLAAC++HGNT +GE IG RLL+LEP+
Sbjct: 655 CMVDLLSRAGLLEEAYNLVKSLPSRLGDSTLGTLLAACKLHGNTEMGENIGRRLLDLEPK 714

Query: 57  SPGVYNLVSNLYAEQERW 4
           +   + +VS+LYAE  +W
Sbjct: 715 NSSAFAMVSSLYAEGGKW 732


>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867324|gb|EEF04455.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 586

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           CV+DLL RAG +EEA+EL+K +     A+   +LL ACRVH NTN+GE +G RLLE+EP+
Sbjct: 356 CVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPE 415

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y ++SNLYA   RW
Sbjct: 416 NAGNYVILSNLYASAGRW 433


>ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
           gi|241918961|gb|EER92105.1| hypothetical protein
           SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/78 (52%), Positives = 59/78 (75%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLLSRAGHLEE Y+L+K  + +  +S + ALL+ACR +GNT LG+ I + LLEL  Q
Sbjct: 694 CIVDLLSRAGHLEEGYKLIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLELGQQ 753

Query: 57  SPGVYNLVSNLYAEQERW 4
           +PG Y L+S ++A++ +W
Sbjct: 754 NPGTYALISEVFAQKGQW 771


>ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [Amborella trichopoda]
           gi|548852118|gb|ERN10288.1| hypothetical protein
           AMTR_s00177p00030400 [Amborella trichopoda]
          Length = 600

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSS-SGNASAIRALLAACRVHGNTNLGETIGSRLLELEP 61
           C+VDLL RAGHLEEAY  ++ V     + S + ALL ACR+HGN  +GE + S+LL LEP
Sbjct: 497 CMVDLLGRAGHLEEAYSFIRSVPLLQKSTSTLGALLGACRIHGNVKMGEVVASQLLSLEP 556

Query: 60  QSPGVYNLVSNLYAEQERW 4
           ++ G Y L+SN+YA+  +W
Sbjct: 557 ENSGTYTLLSNIYADAGQW 575


>ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316376|gb|EFH46799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 547

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+V+LLSR G L+EAYEL+K +    +ASA  +LL  C +HGNT + E +  +L ELEPQ
Sbjct: 444 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARQLFELEPQ 503

Query: 57  SPGVYNLVSNLYAEQERWA 1
           S G Y L+SN+YA  +RWA
Sbjct: 504 SAGSYVLLSNIYAALDRWA 522


>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
          Length = 672

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/78 (52%), Positives = 55/78 (70%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VD+  RAG LEEA +L+  +    NA+ + ALL ACR+HGN  +GE +G  LLELEPQ
Sbjct: 442 CMVDMFGRAGQLEEAEQLINSMPIKPNAAVLGALLGACRIHGNAEMGERVGRILLELEPQ 501

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y L+SN+YA+  RW
Sbjct: 502 NSGRYALLSNIYAKAGRW 519


>ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutrema salsugineum]
           gi|557108318|gb|ESQ48625.1| hypothetical protein
           EUTSA_v10020299mg [Eutrema salsugineum]
          Length = 627

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VD+L RAG +EEA+E +K + S   A  + +LL ACRVH + ++GE++G RL+E+EP+
Sbjct: 397 CIVDMLGRAGRIEEAFEFIKRMPSEATAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 456

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y ++SNLYA   RW
Sbjct: 457 NAGNYVILSNLYASTGRW 474


>gb|EXC27672.1| hypothetical protein L484_009695 [Morus notabilis]
          Length = 191

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 57/78 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLLSR+G L+ AYEL+K +    +A A  ALL AC++H N  +GE + S+LLE+EPQ
Sbjct: 86  CMVDLLSRSGRLKTAYELLKLMPVEPHAGAWGALLGACKLHCNIEIGELVASKLLEIEPQ 145

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y L+SN+YA  ERW
Sbjct: 146 NAGNYVLLSNIYAAAERW 163


>ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily protein
           [Arabidopsis thaliana]
           gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332006824|gb|AED94207.1| CCCH-type zinc finger
           protein SOMNUS [Arabidopsis thaliana]
          Length = 550

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/78 (52%), Positives = 54/78 (69%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+V+LLSR G L+EAYEL+K +    +ASA  +LL  C +HGNT + E +   L ELEPQ
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506

Query: 57  SPGVYNLVSNLYAEQERW 4
           S G Y L+SN+YA  +RW
Sbjct: 507 SAGSYVLLSNIYAALDRW 524


>ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 45/79 (56%), Positives = 56/79 (70%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLL RAG LEEA EL++ +S   +    RALL ACRVHGNT LGE I  RL+ELEP 
Sbjct: 332 CMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPN 391

Query: 57  SPGVYNLVSNLYAEQERWA 1
           +   Y L+SN+Y+ + RWA
Sbjct: 392 NGENYVLLSNIYSRERRWA 410


>ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 45/79 (56%), Positives = 56/79 (70%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLL RAG LEEA EL++ +S   +    RALL ACRVHGNT LGE I  RL+ELEP 
Sbjct: 332 CMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPN 391

Query: 57  SPGVYNLVSNLYAEQERWA 1
           +   Y L+SN+Y+ + RWA
Sbjct: 392 NGENYVLLSNIYSRERRWA 410


>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g13770, mitochondrial; Flags: Precursor
           gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
           [Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 628

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 38/79 (48%), Positives = 58/79 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VD+L RAG ++EA+E +K + S   A  + +LL ACRVH + ++GE++G RL+E+EP+
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457

Query: 57  SPGVYNLVSNLYAEQERWA 1
           + G Y ++SNLYA   RWA
Sbjct: 458 NAGNYVILSNLYASAGRWA 476


>tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           CVVD+L RAG LEEA EL+  + S  + SA+++LL ACR+HGNT++GE +   LLE EP 
Sbjct: 600 CVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGACRIHGNTDVGERVAGVLLETEPT 659

Query: 57  SPGVYNLVSNLYAEQERW 4
             G Y L+SN+YAE+  W
Sbjct: 660 ESGAYVLLSNIYAEKGDW 677


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/78 (52%), Positives = 53/78 (67%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           C+VDLL RA HLEEAY+ VK +     A    ALL AC++H N  LGE    +LLE++P+
Sbjct: 762 CLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPE 821

Query: 57  SPGVYNLVSNLYAEQERW 4
           +PG Y LVSN+YA + RW
Sbjct: 822 NPGNYVLVSNVYAAERRW 839


>ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
           gi|241926743|gb|EER99887.1| hypothetical protein
           SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           CVVD+L RAG LEEA EL+  + S  + SA+++LL ACR+HGNT++GE + S L E EP 
Sbjct: 591 CVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGNTDVGERVASVLTETEPT 650

Query: 57  SPGVYNLVSNLYAEQERW 4
             G Y L+SN+YAE+  W
Sbjct: 651 ESGAYVLLSNIYAEKGDW 668


>gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
          Length = 565

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           CVVD+L RAG LEEA+E+V+ +    +  A+ ALL+AC+ HGN  + E + ++L ELEP 
Sbjct: 418 CVVDMLGRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPH 477

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y ++SN+YAE+E+W
Sbjct: 478 NTGNYIMLSNIYAEKEQW 495


>ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
           gi|20161377|dbj|BAB90301.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa
           Japonica Group] gi|125573076|gb|EAZ14591.1| hypothetical
           protein OsJ_04514 [Oryza sativa Japonica Group]
          Length = 533

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -3

Query: 237 CVVDLLSRAGHLEEAYELVKCVSSSGNASAIRALLAACRVHGNTNLGETIGSRLLELEPQ 58
           CVVD+L RAG LEEA+E+V+ +    +  A+ ALL+AC+ HGN  + E + ++L ELEP 
Sbjct: 418 CVVDMLGRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPH 477

Query: 57  SPGVYNLVSNLYAEQERW 4
           + G Y ++SN+YAE+E+W
Sbjct: 478 NTGNYIMLSNIYAEKEQW 495