BLASTX nr result
ID: Catharanthus22_contig00042992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00042992
(230 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY24840.1| Tetratricopeptide repeat superfamily protein, put... 100 2e-19
emb|CBI34382.3| unnamed protein product [Vitis vinifera] 99 8e-19
emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera] 99 8e-19
ref|XP_004953447.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006648936.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EEC73788.1| hypothetical protein OsI_08474 [Oryza sativa Indi... 83 3e-14
ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|NP_001047740.1| Os02g0680500 [Oryza sativa Japonica Group] g... 80 3e-13
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat... 80 3e-13
ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
gb|EPS60680.1| tetratricopeptide-like helical [Genlisea aurea] 79 5e-13
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe... 79 5e-13
gb|EMJ05696.1| hypothetical protein PRUPE_ppa019362mg [Prunus pe... 79 6e-13
gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta... 78 1e-12
gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus pe... 78 1e-12
gb|EOY12826.1| Pentatricopeptide repeat superfamily protein, put... 77 2e-12
emb|CBI24272.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays] 77 2e-12
ref|XP_004971430.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
>gb|EOY24840.1| Tetratricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 718
Score = 100 bits (249), Expect = 2e-19
Identities = 48/74 (64%), Positives = 57/74 (77%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+DLGSWNSLIAA+ I+GNG L F+EL +S N N ITFTN+LSAC+HAG VEEG E
Sbjct: 496 KDLGSWNSLIAAYGINGNGRPALHAFTELSKSSPHNPNAITFTNILSACSHAGLVEEGYE 555
Query: 48 IFKYMKTEYGLEPS 7
IF M+ EYG+EPS
Sbjct: 556 IFNRMRREYGVEPS 569
>emb|CBI34382.3| unnamed protein product [Vitis vinifera]
Length = 705
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDLGSWNSLIAA+ I+GNG + L +F +L+ + N ITFTN+LSACAHAG V EG E
Sbjct: 484 RDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFE 543
Query: 48 IFKYMKTEYGLEP 10
IFK MK EY LEP
Sbjct: 544 IFKSMKREYSLEP 556
>emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDLGSWNSLIAA+ I+GNG + L +F +L+ + N ITFTN+LSACAHAG V EG E
Sbjct: 420 RDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFE 479
Query: 48 IFKYMKTEYGLEP 10
IFK MK EY LEP
Sbjct: 480 IFKSMKREYSLEP 492
>ref|XP_004953447.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Setaria italica]
Length = 706
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/74 (50%), Positives = 58/74 (78%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+DL SWNS+I A+ +HG+G + L+IF++L+ + T + N ITF +V+SAC+HAG + EG +
Sbjct: 476 KDLVSWNSMITAYGMHGDGHSALRIFNQLKDAGTPSPNAITFVSVISACSHAGLISEGYK 535
Query: 48 IFKYMKTEYGLEPS 7
FK M+T++G+EPS
Sbjct: 536 CFKSMRTDHGIEPS 549
>ref|XP_006648936.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Oryza brachyantha]
Length = 617
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/74 (50%), Positives = 56/74 (75%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+D+ SWNS+I A+ +HG+G + L+IF+EL+ T + N ITFT+++SAC+H+G V EG
Sbjct: 386 KDIVSWNSMINAYGMHGDGLSSLRIFNELQNDGTHSPNAITFTSLISACSHSGLVSEGYR 445
Query: 48 IFKYMKTEYGLEPS 7
F+ MK E+G+EPS
Sbjct: 446 CFESMKNEHGIEPS 459
>gb|EEC73788.1| hypothetical protein OsI_08474 [Oryza sativa Indica Group]
Length = 418
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+D+ SWNS+I A+ IHG+G + L+IF+EL+ T + N ITF +++SAC+H+G V EG
Sbjct: 187 KDIVSWNSMINAYGIHGDGLSSLRIFNELQDDGTCSPNAITFVSLISACSHSGLVSEGYR 246
Query: 48 IFKYMKTEYGLEPS 7
F+ MK +YG+EPS
Sbjct: 247 CFQSMKNDYGIEPS 260
>ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/76 (48%), Positives = 59/76 (77%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RD+ +W+++IA ++IHG+G+ L++F ++RSKT+ N +TFT+VLSAC+H+G VE+G +
Sbjct: 272 RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIP-NCVTFTSVLSACSHSGLVEKGHQ 330
Query: 48 IFKYMKTEYGLEPSEK 1
IF+ M TEY + P K
Sbjct: 331 IFETMWTEYKITPQIK 346
>ref|NP_001047740.1| Os02g0680500 [Oryza sativa Japonica Group]
gi|50253137|dbj|BAD29383.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113537271|dbj|BAF09654.1| Os02g0680500 [Oryza
sativa Japonica Group] gi|222623447|gb|EEE57579.1|
hypothetical protein OsJ_07931 [Oryza sativa Japonica
Group]
Length = 418
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+D+ SWNS+I A+ IHG+G + L+IF+EL+ T + N ITF +++SAC+H+G V EG
Sbjct: 187 KDIVSWNSMINAYGIHGDGLSSLRIFNELQDDGTCSPNAITFVSLISACSHSGLVSEGYR 246
Query: 48 IFKYMKTEYGLEPS 7
F+ MK +Y +EPS
Sbjct: 247 CFQSMKNDYRIEPS 260
>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RD+ W+S+IAA+ IHG G L+IF ++ ++ T+ N +TF ++LSAC+HAG VEEGL+
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 48 IFKYMKTEYGLEPSEK 1
IF M +Y L P +
Sbjct: 532 IFDRMVHDYQLRPDSE 547
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/69 (37%), Positives = 47/69 (68%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+DL W+++IA++ IHG+G + +F ++ ++ + + +TFT VLSAC+H+G +EEG
Sbjct: 983 KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAG-VRPSHVTFTCVLSACSHSGLLEEGKM 1041
Query: 48 IFKYMKTEY 22
F+ M E+
Sbjct: 1042 YFQLMTEEF 1050
>ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Fragaria vesca subsp. vesca]
Length = 872
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDL SWNS+I+ ++ HG G+ VL++F E+RR + L ++GITF ++SAC HAG V+EG
Sbjct: 564 RDLVSWNSMISGYAQHGQGNKVLEVFEEMRR-QNLEIDGITFILIISACTHAGLVDEGKR 622
Query: 48 IFKYMKTEYGLEPS 7
FK M +Y ++P+
Sbjct: 623 YFKMMVQDYHIDPT 636
>gb|EPS60680.1| tetratricopeptide-like helical [Genlisea aurea]
Length = 664
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = -3
Query: 225 DLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLEI 46
D+ WN++I ++HG+G+ L+IFS+L++S+ LN N ITF VLSAC H+G VE G
Sbjct: 480 DVSPWNAIICGLAMHGHGEMCLEIFSDLQKSRNLNPNSITFIGVLSACCHSGLVEAGKRC 539
Query: 45 FKYMKTEYGLEPSEK 1
F+ M T + LEP+ K
Sbjct: 540 FEAMSTVHNLEPNLK 554
>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
Length = 672
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+++ +WN++I ++HG D +++FS+++RSK L NG+TF NVL+ACAH+G V++GL
Sbjct: 364 KEISTWNAMIGGLAMHGRADDAIELFSKMQRSK-LEPNGVTFLNVLNACAHSGFVDKGLN 422
Query: 48 IFKYMKTEYGLEP 10
F MK YG+EP
Sbjct: 423 FFSSMKQFYGIEP 435
>gb|EMJ05696.1| hypothetical protein PRUPE_ppa019362mg [Prunus persica]
Length = 558
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDL SWNS+I +HG+G L + E+ S T N +TFT+VLSAC+HAG V+EGL+
Sbjct: 375 RDLVSWNSMIGGFGMHGHGRAALHLLKEMNHSGTCP-NSVTFTSVLSACSHAGLVDEGLQ 433
Query: 48 IFKYMKTEYGLEPS 7
+F M EYG+ PS
Sbjct: 434 VFHSMMKEYGVIPS 447
>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 790
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/72 (43%), Positives = 57/72 (79%)
Frame = -3
Query: 216 SWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLEIFKY 37
SWN++IAA+ +HGN L++F ++++ + + +G+TFT++L+AC+H+G VE+GL++FK
Sbjct: 609 SWNTMIAAYGMHGNCIEALRLFDQMKK-EMIKPDGMTFTSILTACSHSGLVEDGLQVFKC 667
Query: 36 MKTEYGLEPSEK 1
M+ EY ++P E+
Sbjct: 668 MREEYSIDPCEE 679
>gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus persica]
Length = 731
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDL SWNS+I+ ++ HGNG VL++F ++RR + L ++GITF ++SAC HAG V+EG +
Sbjct: 423 RDLVSWNSMISGYAQHGNGKKVLEVFEDMRR-QNLEMDGITFIIMISACTHAGLVDEGKK 481
Query: 48 IFKYMKTEYGLEPS 7
F M +Y ++P+
Sbjct: 482 YFNIMVQDYHIDPT 495
>gb|EOY12826.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 744
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/74 (43%), Positives = 55/74 (74%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+DL W+S+I ++IHG G+ L +F +++ +++ +L+ + FT++L AC+H+G VE+GL+
Sbjct: 415 KDLAVWSSMINGYAIHGMGNEALNLFHQMQITESFSLDHVVFTSILLACSHSGLVEDGLK 474
Query: 48 IFKYMKTEYGLEPS 7
FK MK YG+EPS
Sbjct: 475 YFKDMKRVYGIEPS 488
>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDL SWN +I+ + +HG G + +F + R + L N ITFTN+LSAC+H+G +EEG +
Sbjct: 421 RDLVSWNVMISVYGMHGFGMDAVNLFQQFR-TMGLKPNHITFTNLLSACSHSGLIEEGWK 479
Query: 48 IFKYMKTEYGLEPS 7
FK MKTEY ++P+
Sbjct: 480 YFKMMKTEYAMDPA 493
>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
RDL SWN +I+ + +HG G + +F + R + L N ITFTN+LSAC+H+G +EEG +
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQQFR-TMGLKPNHITFTNLLSACSHSGLIEEGWK 722
Query: 48 IFKYMKTEYGLEPS 7
FK MKTEY ++P+
Sbjct: 723 YFKMMKTEYAMDPA 736
>gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/74 (45%), Positives = 54/74 (72%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+DL SWNS+I A+ +HG+G + L++F +L+ + T N ITF +V+SAC+H+G V EG +
Sbjct: 479 KDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHK 538
Query: 48 IFKYMKTEYGLEPS 7
F+ M ++G+EPS
Sbjct: 539 CFESMGRDHGIEPS 552
>ref|XP_004971430.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like isoform X1 [Setaria italica]
gi|514787837|ref|XP_004971431.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g39530-like isoform X2 [Setaria italica]
Length = 822
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = -3
Query: 228 RDLGSWNSLIAAHSIHGNGDTVLKIFSELRRSKTLNLNGITFTNVLSACAHAGKVEEGLE 49
+D+ WNS+I+ +S HG+ + L++F +L R + N +TF VL+ACAHAG V+EGL
Sbjct: 591 KDVICWNSMISTYSQHGHAEEALRVF-QLMREAGVEPNYVTFVGVLAACAHAGLVDEGLH 649
Query: 48 IFKYMKTEYGLEP 10
F MKTEYG+EP
Sbjct: 650 HFNSMKTEYGIEP 662