BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00042981
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]   124   2e-26
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   123   2e-26
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   123   3e-26
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   123   3e-26
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   122   6e-26
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   120   1e-25
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   119   3e-25
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   119   4e-25
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   117   2e-24
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   117   2e-24
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   117   2e-24
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   117   2e-24
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   115   6e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   115   8e-24
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   114   2e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   113   2e-23
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   113   2e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   113   2e-23
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   112   4e-23
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   112   5e-23

>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/121 (49%), Positives = 78/121 (64%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F+LS NKA+ +F  IHC
Sbjct: 514 LWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFSLSDNKATRIFEKIHC 573

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 574 DLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKV 633

Query: 4   V 2
           V
Sbjct: 634 V 634


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/121 (49%), Positives = 77/121 (63%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F LS NKA+ +F  IHC
Sbjct: 268 LWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKIHC 327

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 328 DLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKV 387

Query: 4   V 2
           V
Sbjct: 388 V 388


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/121 (49%), Positives = 77/121 (63%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F LS NKA+ +F  IHC
Sbjct: 182 LWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHC 241

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 242 DLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKV 301

Query: 4   V 2
           V
Sbjct: 302 V 302


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/121 (49%), Positives = 77/121 (63%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F LS NKA+ +F  IHC
Sbjct: 263 LWHNRMGHPSEKVVKLLPLVSNIKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHC 322

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 323 DLWASYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKV 382

Query: 4   V 2
           V
Sbjct: 383 V 383


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/121 (49%), Positives = 77/121 (63%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F LS NKA+ +F  IHC
Sbjct: 395 LWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHC 454

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 455 DLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFQMFMSFIAMVDQQFSQIVKV 514

Query: 4   V 2
           V
Sbjct: 515 V 515


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  120 bits (302), Expect = 1e-25
 Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTP--ATTCNICLRAKEVRDYFTLSHNKASAVFYLI 191
           LWH RLGHPS   + + L  S  T +   + TC IC++AK+ RD F LS NK S  F L+
Sbjct: 506 LWHQRLGHPSSKAL-HLLPFSDVTSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELV 564

Query: 190 HCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNV 11
           HCDLW PY+TTS  G+  FLT++DDYSR VW+YL+  K      LK++ A+++ Q+  N+
Sbjct: 565 HCDLWGPYRTTSICGSRYFLTLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNI 624

Query: 10  KIV 2
           K++
Sbjct: 625 KMI 627


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/121 (48%), Positives = 76/121 (62%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+ HPS+ VV+    +S    +    C IC RAK  RD F LS NKA+ +F  IHC
Sbjct: 227 LWHKRMRHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHC 286

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+ GA  FLTI+DD+SR VWIYL+V+K  V  +   + AM+  QF + VK+
Sbjct: 287 DLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTDVFRMFMSFIAMVDRQFSQTVKV 346

Query: 4   V 2
           V
Sbjct: 347 V 347


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/121 (47%), Positives = 75/121 (61%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIHC 185
           LWH R+GHPS+ VV+    +S    +    C IC RAK  RD F L+ NKA+ +F  IHC
Sbjct: 515 LWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKIHC 574

Query: 184 DLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVKI 5
           DLW  YK  S+  A  FLTI+DD+SR VWIYL+V K  V  +   + AM+  QF + VK+
Sbjct: 575 DLWGSYKHVSSCAARYFLTIIDDFSRAVWIYLLVNKTEVFRMFMSFIAMVDRQFSQTVKV 634

Query: 4   V 2
           V
Sbjct: 635 V 635


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/123 (44%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKT--KTPATTCNICLRAKEVRDYFTLSHNKASAVFYLI 191
           LWH RLGHPS  V++  L  S  T     + TC IC++AK+ RD F LS+NK S+ F ++
Sbjct: 470 LWHCRLGHPSSKVLK-LLSFSDSTGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMV 528

Query: 190 HCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNV 11
           HCDLW PY+TTS  G++ FLT++D+Y+R VW+YL+  K      LK++ ++++ QF   +
Sbjct: 529 HCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQFSTKI 588

Query: 10  KIV 2
           K +
Sbjct: 589 KTI 591


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  117 bits (293), Expect = 2e-24
 Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATT--CNICLRAKEVRDYFTLSHNKASAVFYLI 191
           LWH RLGHPS F V + L L  KT +  T+  C++C RAK+ R+ F  S NK    F LI
Sbjct: 529 LWHQRLGHPS-FSVLSSLPLFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLI 587

Query: 190 HCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNV 11
           HCD+W PY+  ++ GA  FLTI+DDYSR VW YL++EK  V  +L ++    + QF K V
Sbjct: 588 HCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKTV 647

Query: 10  KIV 2
           K+V
Sbjct: 648 KMV 650


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLG---LSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYL 194
           LWH RLGH SD +V N L    LS   +     C+ C+RAK+ RD F LS N++   F L
Sbjct: 291 LWHRRLGHASDKIV-NLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQL 349

Query: 193 IHCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKN 14
           IHCD+W PY+T S  GA  FLTI+DDYSR VW+YL+ +K      LKD+ A+++ QF   
Sbjct: 350 IHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTE 409

Query: 13  VKIV 2
           +K V
Sbjct: 410 IKTV 413


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLG---LSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYL 194
           LWH RLGH SD +V N L    LS   +     C+ C+RAK+ RD F LS N++   F L
Sbjct: 515 LWHRRLGHASDKIV-NLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQL 573

Query: 193 IHCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKN 14
           IHCD+W PY+  S  GA  FLTI+DDYSR VW+YL+ +K      LKD+ A+++ QF   
Sbjct: 574 IHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTE 633

Query: 13  VKIV 2
           +KIV
Sbjct: 634 IKIV 637


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  115 bits (288), Expect = 6e-24
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENF--LGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLI 191
           LWH RLGHPSD V+ +   LG +         C+ C R K+VR+ F LS+ +A  +F LI
Sbjct: 388 LWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLI 447

Query: 190 HCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNV 11
           H D+W PY+T +T GA  FLTI+DD+SR VWIYL+ EK    +IL+++  M KTQF K V
Sbjct: 448 HVDIWGPYRTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPV 507

Query: 10  KIV 2
           K +
Sbjct: 508 KCI 510


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  115 bits (287), Expect = 8e-24
 Identities = 59/124 (47%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLG---LSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYL 194
           LWH RLGH SD +V N L    LS   +     C+ C+RAK+ RD F L  N++   F L
Sbjct: 291 LWHRRLGHASDKIV-NLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQL 349

Query: 193 IHCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKN 14
           IHCD+W PY+T S  GA  FLTI+DDYSR VW+YL+ +K      LKD+ A+++ QF   
Sbjct: 350 IHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTE 409

Query: 13  VKIV 2
           +K V
Sbjct: 410 IKTV 413


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  114 bits (284), Expect = 2e-23
 Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVV-------ENFLGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASA 206
           LWH+RLGHPS  V+       E+F   S   KT    C++C+RAK+ R  F+ S NKA  
Sbjct: 513 LWHMRLGHPSSKVLSSVLPSLEDFDSCSSDLKT---ICDVCVRAKQTRASFSESFNKAEE 569

Query: 205 VFYLIHCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQ 26
            F  IH D+W PYK  S+ GA  FLTI+DD+SR VWI+L++ K  V ++L+ + AM   Q
Sbjct: 570 CFSFIHYDVWGPYKHASSCGAHYFLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQ 629

Query: 25  FHKNVKIV 2
           F+K VK V
Sbjct: 630 FNKQVKTV 637


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENF-LGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIH 188
           LWH RLGHPS  V+ +  L         + +C++C RAK+ R+ F  S NK++  F LIH
Sbjct: 512 LWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIH 571

Query: 187 CDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVK 8
           CD+W PY+  S+ GA  FLTI+DD+SR VW YL++ K  V ++L ++ A  + QF K+VK
Sbjct: 572 CDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVK 631

Query: 7   IV 2
           I+
Sbjct: 632 II 633


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGLSKKTKTPATT---CNICLRAKEVRDYFTLSHNKASAVFYL 194
           LWH R+GHPS  VV+    +    +        C+IC RA++ R+ F  S NKA   F L
Sbjct: 323 LWHRRMGHPSSRVVDLIXEVDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDL 382

Query: 193 IHCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKN 14
           IHCDLW  Y+  ++ G   FLTI+DD SR VWIYL+  K  V  +LK++  M++ QF KN
Sbjct: 383 IHCDLWGAYRVPASCGGIYFLTIVDDCSRAVWIYLLNRKNEVACVLKNFIVMVRQQFEKN 442

Query: 13  VKIV 2
           VKIV
Sbjct: 443 VKIV 446


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENF-LGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIH 188
           LWH RLGHPS  V+ +  L         + +C++C RAK+ R+ F  S NK++  F LIH
Sbjct: 512 LWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIH 571

Query: 187 CDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVK 8
           CD+W PY+  S+ GA  FLTI+DD+SR VW YL++ K  V ++L ++ A  + QF K+VK
Sbjct: 572 CDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVK 631

Query: 7   IV 2
           I+
Sbjct: 632 II 633


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENFLGL-SKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLIH 188
           LWH RLGHPS  V+ +   L S      + +C++C RAK+ R+ F +S NK+   F LIH
Sbjct: 90  LWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIH 149

Query: 187 CDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNVK 8
           CD+W PY+  S+ GA  FLTI+DD+SR VW YL++ K  V  +L ++    + QF K+VK
Sbjct: 150 CDVWGPYRVPSSCGAVYFLTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVK 209

Query: 7   IV 2
           ++
Sbjct: 210 VL 211


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 LWHIRLGHPSDFVVENF--LGLSKKTKTPATTCNICLRAKEVRDYFTLSHNKASAVFYLI 191
           LWH RLGHPS  V+ +F     S        +C+IC RAK+ R+ F+ S NK +  F LI
Sbjct: 504 LWHHRLGHPSTGVLLSFPEFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELI 563

Query: 190 HCDLWVPYKTTSTVGAS*FLTILDDYSRVVWIYLIVEKIHVVNILKDYFAMIKTQFHKNV 11
           HCD+W PY+T ++ G+  FLTI+DD+SR VW +L+ EK  V  +++++ AM + QF K++
Sbjct: 564 HCDVWGPYRTPASCGSVYFLTIVDDFSRSVWTFLMAEKSEVSRLIRNFCAMSERQFCKSI 623

Query: 10  KIV 2
           K V
Sbjct: 624 KTV 626