BLASTX nr result

ID: Catharanthus22_contig00042595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00042595
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339673.1| PREDICTED: ethylene-responsive transcription...    58   1e-06
ref|XP_002320179.2| hypothetical protein POPTR_0014s09020g [Popu...    57   3e-06

>ref|XP_006339673.1| PREDICTED: ethylene-responsive transcription factor CRF3-like
           [Solanum tuberosum]
          Length = 300

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/85 (42%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
 Frame = -2

Query: 251 ASAESSLLCSPTSVLRFNNGGKLGEENKFKWRPLDDGKSQN--------------NSFWN 114
           ++ E   LCSPTSVLR NN       +     P  D K  N              N F  
Sbjct: 171 STGECENLCSPTSVLRQNNNDNNNNNDDAAPAPAPDAKITNQEMNDESKKMEIDQNGFMF 230

Query: 113 DDGLPL-DQCFLNEYFDFRSPSPLI 42
           DD LPL DQ FL ++FDFRSPSPL+
Sbjct: 231 DDNLPLMDQSFLKDFFDFRSPSPLM 255


>ref|XP_002320179.2| hypothetical protein POPTR_0014s09020g [Populus trichocarpa]
           gi|550323806|gb|EEE98494.2| hypothetical protein
           POPTR_0014s09020g [Populus trichocarpa]
          Length = 314

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
 Frame = -2

Query: 275 GYDSGKDSASAESSLLCSPTSVLRFNNGGKLGEENKFK------WRPLDDGKSQNNSFWN 114
           GYDSGK+S ++    LCSPTSVLRF++ G+ G E++        WR   +   +      
Sbjct: 195 GYDSGKESHNS----LCSPTSVLRFHSTGEPGPESQAAVQSDCCWRQNQEVVQEEILKGG 250

Query: 113 DDG-LPLDQCFLNEYFDFRSPSPLIYEDQEQEHQVLED 3
           DD  L +D   L E++DF SP+P+ +E+      VL +
Sbjct: 251 DDECLVMDPLCLKEFWDFESPAPIFFEECSVPGTVLRE 288


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