BLASTX nr result

ID: Catharanthus22_contig00042527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00042527
         (278 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518868.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
ref|XP_006440743.1| hypothetical protein CICLE_v10021474mg [Citr...    55   1e-05

>ref|XP_002518868.1| conserved hypothetical protein [Ricinus communis]
           gi|223541855|gb|EEF43401.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -3

Query: 207 ISLCWVPPPQNFVKLNTDTDGYAEKNPSLGGAGGVFRNNHGDWILDFEVKLTHTTNTLTE 28
           +SLCW PPP +F KLN  TDG   ++   G  GG+ R+ +G W+  F + ++  + T  E
Sbjct: 33  VSLCWNPPPSSFFKLN--TDGVVHQSSGHGYVGGLIRDTNGRWVAGFSINISLCSITCAE 90

Query: 27  LVAIRTGL 4
           L  +  GL
Sbjct: 91  LWGVYQGL 98


>ref|XP_006440743.1| hypothetical protein CICLE_v10021474mg [Citrus clementina]
           gi|557543005|gb|ESR53983.1| hypothetical protein
           CICLE_v10021474mg [Citrus clementina]
          Length = 290

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = -3

Query: 201 LCWVPPPQNFVKLNTDTDGYAEKNPSLGGAGGVFRNNHGDWILDFEVKLTHTTNTLTELV 22
           +CW+PPP N+VKLN +  G + +     GAGG+ R+  G WIL +   L  + +  +EL 
Sbjct: 121 ICWMPPPTNWVKLNIE--GSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 178

Query: 21  AIRTGL 4
           A+  GL
Sbjct: 179 ALYHGL 184


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