BLASTX nr result
ID: Catharanthus22_contig00042499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00042499
(375 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 120 1e-25
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 116 3e-24
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera] 116 3e-24
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 113 2e-23
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 113 2e-23
ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 112 4e-23
emb|CBI26097.3| unnamed protein product [Vitis vinifera] 111 1e-22
gb|EOY06439.1| RING/U-box superfamily protein, putative isoform ... 107 2e-21
gb|EOY06438.1| RING/U-box superfamily protein, putative isoform ... 105 8e-21
ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 104 1e-20
gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus pe... 104 1e-20
ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citr... 104 1e-20
ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 100 2e-19
ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidop... 100 3e-19
gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis th... 100 3e-19
gb|EXB74839.1| E3 ubiquitin-protein ligase Topor [Morus notabilis] 99 8e-19
ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Caps... 99 8e-19
ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|5... 97 2e-18
ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutr... 92 5e-17
gb|EPS67027.1| hypothetical protein M569_07753 [Genlisea aurea] 82 1e-13
>ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
tuberosum]
Length = 272
Score = 120 bits (302), Expect = 1e-25
Identities = 58/107 (54%), Positives = 75/107 (70%)
Frame = +3
Query: 48 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWF 227
K++ ++ KSC ICLCR+ R AAVVIPC HAYCI CIR+WS+ KR CPLCN+ FDSWF
Sbjct: 6 KVITTAVARKSCPICLCRLHHRSAAVVIPCMHAYCIVCIRRWSDVKRKCPLCNADFDSWF 65
Query: 228 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLAEQLRLTRR 368
RI+ SS+TFHKE+L +A + + V S RLA++ +TRR
Sbjct: 66 SRISFSSRTFHKEQL-SARNETKKLHSGFVPSRLRDRLADRRAITRR 111
>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
Length = 294
Score = 116 bits (290), Expect = 3e-24
Identities = 58/112 (51%), Positives = 76/112 (67%)
Frame = +3
Query: 6 NGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFK 185
+ S R R K++A +I GKSC ICL + +RRAAV+ C HAYC CIR+WS+ K
Sbjct: 17 SSSSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLK 76
Query: 186 RNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 341
R CPLCN+ FDS F+RI+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 77 RKCPLCNAHFDSLFYRISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 125
>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
Length = 321
Score = 116 bits (290), Expect = 3e-24
Identities = 58/112 (51%), Positives = 76/112 (67%)
Frame = +3
Query: 6 NGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFK 185
+ S R R K++A +I GKSC ICL + +RRAAV+ C HAYC CIR+WS+ K
Sbjct: 15 SSSSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLK 74
Query: 186 RNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 341
R CPLCN+ FDS F+RI+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 75 RKCPLCNAHFDSLFYRISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 123
>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 113 bits (283), Expect = 2e-23
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +3
Query: 45 SKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSW 224
+K+++ +I G++C ICL +E+R AAV+ C HAYCI CIRKWSN KR CPLCN+QFDSW
Sbjct: 21 TKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFDSW 80
Query: 225 FFRINLSSQTFHKEKL 272
F +INLSSQ+F KE+L
Sbjct: 81 FTKINLSSQSFRKERL 96
>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 113 bits (283), Expect = 2e-23
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +3
Query: 45 SKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSW 224
+K+++ +I G++C ICL +E+R AAV+ C HAYCI CIRKWSN KR CPLCN+QFDSW
Sbjct: 21 TKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFDSW 80
Query: 225 FFRINLSSQTFHKEKL 272
F +INLSSQ+F KE+L
Sbjct: 81 FTKINLSSQSFRKERL 96
>ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
lycopersicum]
Length = 272
Score = 112 bits (281), Expect = 4e-23
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = +3
Query: 48 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWF 227
K +A ++ +SC ICLC+I R AAVVIPC HAYCI CIR+WS+ KR CPLCN+ FDSWF
Sbjct: 6 KEIAAAVARQSCPICLCQIHHRSAAVVIPCMHAYCIVCIRRWSDVKRKCPLCNADFDSWF 65
Query: 228 FRINLSSQTFHKEKLRA 278
RI+ SS+TF KE+L A
Sbjct: 66 SRISFSSRTFQKEQLSA 82
>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 111 bits (277), Expect = 1e-22
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +3
Query: 54 LAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWFFR 233
+A +I GKSC ICL + +RRAAV+ C HAYC CIR+WS+ KR CPLCN+ FDS F+R
Sbjct: 1 MAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLKRKCPLCNAHFDSLFYR 60
Query: 234 INLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 341
I+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 61 ISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 93
>gb|EOY06439.1| RING/U-box superfamily protein, putative isoform 2 [Theobroma
cacao]
Length = 289
Score = 107 bits (267), Expect = 2e-21
Identities = 51/109 (46%), Positives = 76/109 (69%)
Frame = +3
Query: 48 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWF 227
++++ ++ GK+C ICL ++ R AAV+ C+HAYC+ CIRKWS+ KR CPLCNS FDSWF
Sbjct: 21 RVISPAVVGKTCPICLRNLDVRGAAVLTVCSHAYCLGCIRKWSDLKRKCPLCNSTFDSWF 80
Query: 228 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLAEQLRLTRRCR 374
++I+LSS+ F KE++ A ++G V +H PR L ++ R+ R R
Sbjct: 81 YKIDLSSRKFFKEQVPAL-SEGKPV----IHRPRS-TLIDRRRIIERTR 123
>gb|EOY06438.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 301
Score = 105 bits (261), Expect = 8e-21
Identities = 47/94 (50%), Positives = 69/94 (73%)
Frame = +3
Query: 48 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWF 227
++++ ++ GK+C ICL ++ R AAV+ C+HAYC+ CIRKWS+ KR CPLCNS FDSWF
Sbjct: 21 RVISPAVVGKTCPICLRNLDVRGAAVLTVCSHAYCLGCIRKWSDLKRKCPLCNSTFDSWF 80
Query: 228 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPR 329
++I+LSS+ F KE++ A ++G V +H PR
Sbjct: 81 YKIDLSSRKFFKEQVPAL-SEGKPV----IHRPR 109
>ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Fragaria vesca
subsp. vesca]
Length = 282
Score = 104 bits (260), Expect = 1e-20
Identities = 50/121 (41%), Positives = 71/121 (58%)
Frame = +3
Query: 3 RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNF 182
R+G E+ RR++ SI G++C ICL +E R AAV+ C HAYC+ CIRKWS
Sbjct: 12 RSGRREKLLRRVILP-----SIRGQNCPICLGSLEPRSAAVLEACKHAYCLRCIRKWSTL 66
Query: 183 KRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLAEQLRLT 362
+R CPLCNS F+SWF I+LSS++F +E L ++ +H R + + R +
Sbjct: 67 RRKCPLCNSIFESWFDTISLSSRSFRREILPPLNTNASATGTRSLHDAHPRNVMNERRRS 126
Query: 363 R 365
R
Sbjct: 127 R 127
>gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus persica]
Length = 261
Score = 104 bits (260), Expect = 1e-20
Identities = 54/118 (45%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Frame = +3
Query: 15 SER-RFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRN 191
SER R R L +++ + G++C ICL +E R AAV+ CNHAYC+ CIRKWS +R
Sbjct: 9 SERSRSREKLVGRVIWPATRGQNCPICLGALEPRSAAVLTSCNHAYCVRCIRKWSGLRRK 68
Query: 192 CPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSL---SDVHSPRGRRLAEQLR 356
CPLCN+ FDSWF I+LSS++FH+E L +S S + H R R +E+ R
Sbjct: 69 CPLCNADFDSWFSYISLSSRSFHREILPPLDNTSSSRSFRLQQEEHPSRHVRNSERRR 126
>ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citrus clementina]
gi|557521520|gb|ESR32887.1| hypothetical protein
CICLE_v10005542mg [Citrus clementina]
Length = 294
Score = 104 bits (259), Expect = 1e-20
Identities = 49/102 (48%), Positives = 66/102 (64%)
Frame = +3
Query: 18 ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCP 197
E+R R S++++ +I + C ICL + RR AV+ C HAYC+ECI KWSN KRNCP
Sbjct: 16 EKREREKFVSRVISPAIRWQKCPICLDNLTVRRTAVLKVCTHAYCLECIEKWSNLKRNCP 75
Query: 198 LCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHS 323
LCN+ F SWF+RINLSS F +++L+ P +S HS
Sbjct: 76 LCNAPFRSWFYRINLSSSDFLQQQLQ--PLIKDKTFISQCHS 115
>ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Citrus
sinensis]
Length = 294
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +3
Query: 18 ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCP 197
E+R R S++++ +I + C ICL + RR AV+ C HAYC+ECI KWSN KR CP
Sbjct: 16 EKREREKFVSRVISPAIRWQKCPICLDNLTVRRTAVLKVCTHAYCLECIEKWSNLKRICP 75
Query: 198 LCNSQFDSWFFRINLSSQTFHKEKLR 275
LCN+ F SWF+RINLSS F +++L+
Sbjct: 76 LCNAPFRSWFYRINLSSSDFLQQQLQ 101
>ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidopsis thaliana]
gi|17473924|gb|AAL38373.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|20148385|gb|AAM10083.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330254541|gb|AEC09635.1| C3HC4 type zinc finger
domain protein [Arabidopsis thaliana]
Length = 296
Score = 100 bits (248), Expect = 3e-19
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCIECIRKWSN 179
R+ ES +F + + ++ GKSC ICL + ERR+A VI C H YC+ CIRKWS+
Sbjct: 17 RSPESIAKF----AGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCLACIRKWSS 72
Query: 180 FKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 272
FKRNCPLCN++FDSWF + +S+ +HKE+L
Sbjct: 73 FKRNCPLCNTRFDSWFIVSDFASRKYHKEQL 103
>gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 270
Score = 100 bits (248), Expect = 3e-19
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCIECIRKWSN 179
R+ ES +F + + ++ GKSC ICL + ERR+A VI C H YC+ CIRKWS+
Sbjct: 17 RSPESIAKF----AGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCLACIRKWSS 72
Query: 180 FKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 272
FKRNCPLCN++FDSWF + +S+ +HKE+L
Sbjct: 73 FKRNCPLCNTRFDSWFIVSDFASRKYHKEQL 103
>gb|EXB74839.1| E3 ubiquitin-protein ligase Topor [Morus notabilis]
Length = 317
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/99 (45%), Positives = 61/99 (61%)
Frame = +3
Query: 48 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWF 227
++++ +I G+ C ICL + R +AV+ CNHAYC CIRKWS F+R CPLCNS FDSWF
Sbjct: 20 RIISPAIRGQYCPICLEYLHGRTSAVLTACNHAYCEHCIRKWSFFRRKCPLCNSDFDSWF 79
Query: 228 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLA 344
RI+ SS FH+ +L + + R RR+A
Sbjct: 80 SRISFSSGKFHRHRLPPLETTSSRNFRFEEEEERPRRIA 118
>ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Capsella rubella]
gi|482564180|gb|EOA28370.1| hypothetical protein
CARUB_v10024575mg [Capsella rubella]
Length = 276
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +3
Query: 54 LAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCIECIRKWSNFKRNCPLCNSQFDSWFF 230
L ++ GKSC IC + +RRAA VI C+H YC+ CIRKWS FKRNCPLCN+ FDSWF
Sbjct: 12 LFTALRGKSCPICFENLTDRRAAAVITACSHGYCLSCIRKWSGFKRNCPLCNTSFDSWFI 71
Query: 231 RINLSSQTFHKEKL 272
+L+S+ +HKE L
Sbjct: 72 VSDLASRKYHKEYL 85
>ref|XP_002330333.1| predicted protein [Populus trichocarpa]
gi|566185432|ref|XP_006380195.1| zinc finger family
protein [Populus trichocarpa]
gi|550333716|gb|ERP57992.1| zinc finger family protein
[Populus trichocarpa]
Length = 289
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Frame = +3
Query: 15 SERRFRRILTSKLLAQSITGKSCSICLCRI----EERRAAVVIPCNHAYCIECIRKWSNF 182
S+R+ + SK++ +I G+SC +CL + RR AV+ C HAYC++CIRKWS+
Sbjct: 12 SKRQSQEKFLSKVILPAIRGQSCPVCLKDFGGEEDYRRVAVIRVCLHAYCLDCIRKWSDI 71
Query: 183 KRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGR 335
KR CPLCNS+F+SWF RI LS++ F EKL + V+ D+ S R R
Sbjct: 72 KRKCPLCNSEFNSWFCRIILSTRNFSTEKLPVV-RESRRVTPLDILSSRQR 121
>ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutrema salsugineum]
gi|557112303|gb|ESQ52587.1| hypothetical protein
EUTSA_v10017000mg [Eutrema salsugineum]
Length = 300
Score = 92.4 bits (228), Expect = 5e-17
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +3
Query: 54 LAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWFFR 233
+ ++ G+SC ICL + RRAAV+ C H YC+ CIRKWS+ KR+CPLCN+ FDSWF
Sbjct: 35 IVAALRGRSCPICLENLTGRRAAVITTCKHGYCLACIRKWSSIKRSCPLCNTNFDSWFIV 94
Query: 234 INLSSQTFHKEKL 272
+L+ + + KE+L
Sbjct: 95 SDLALRKYRKEQL 107
>gb|EPS67027.1| hypothetical protein M569_07753 [Genlisea aurea]
Length = 258
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +3
Query: 54 LAQSITGKSCSICLCRIEERRAAVVIPCNHAYCIECIRKWSNFKRNCPLCNSQFDSWFFR 233
+A S+ GK C ICL +E R +V++PC HAYC+ CIR+WS+ K NCPLCN F SW+
Sbjct: 1 MAGSLGGKRCPICLGGLETRSPSVILPCGHAYCVGCIRRWSDVKCNCPLCNYDFRSWW-- 58
Query: 234 INLSSQTFHKEKLRAAP----AKGASVSLSDVHSPRGRRLAEQLRLTRRCR 374
+ SS + +E+ A+P K S ++ R + E+ R+ RR R
Sbjct: 59 LCRSSVGYGEEE--ASPIGRSQKNGSRRRDELLRRRRYQSYERRRIVRRSR 107