BLASTX nr result
ID: Catharanthus22_contig00042377
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00042377 (253 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 80 2e-14 ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 70 2e-13 gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 72 3e-13 gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 72 3e-13 ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 72 3e-13 gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 72 3e-13 gb|AAD17351.1| contains similarity to retrovirus-related polypro... 70 6e-13 gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 69 3e-12 emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera] 67 3e-12 ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 69 3e-12 ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 69 3e-12 emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 67 3e-12 ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 69 5e-12 gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 71 2e-11 gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 71 2e-11 ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 71 2e-11 emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 74 3e-11 gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-... 69 6e-11 gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 72 8e-11 gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 72 1e-10 >gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas] Length = 1358 Score = 80.1 bits (196), Expect(2) = 2e-14 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L +S AC+PQ DGQTEVVN LTQLLR V ++KSWEE+L +EFAYN HSTT Sbjct: 1071 LGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTT 1130 Query: 175 GSSP 186 SP Sbjct: 1131 NMSP 1134 Score = 24.3 bits (51), Expect(2) = 2e-14 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDL 230 F+ Y FN LTPLDL Sbjct: 1135 FEVAYGFNPLTPLDL 1149 >ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis] Length = 821 Score = 70.1 bits (170), Expect(2) = 2e-13 Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K+WEE L +EFAYN HS T Sbjct: 274 LGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSAT 333 Query: 175 GSSP 186 SP Sbjct: 334 KFSP 337 Score = 31.2 bits (69), Expect(2) = 2e-13 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +3 Query: 177 FFSFQNVYSFNLLTPLDLTFLPCD 248 F F+ VY FN LTPLDL LP D Sbjct: 335 FSPFEIVYGFNPLTPLDLLPLPID 358 >gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 72.4 bits (176), Expect(2) = 3e-13 Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAVTDMK--SWEENLLIIEFAYNYCSHSTT 174 LGT L FS +C+PQ DGQTEVVN L +LRA+ K SWE+ L I+EFAYN HS+T Sbjct: 1301 LGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSST 1360 Query: 175 GSSP 186 G +P Sbjct: 1361 GKTP 1364 Score = 28.1 bits (61), Expect(2) = 3e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL LP Sbjct: 1365 FEVVYGFNPLTPLDLLPLP 1383 >gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 72.4 bits (176), Expect(2) = 3e-13 Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAVTDMK--SWEENLLIIEFAYNYCSHSTT 174 LGT L FS +C+PQ DGQTEVVN L +LRA+ K SWE+ L I+EFAYN HS+T Sbjct: 1301 LGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSST 1360 Query: 175 GSSP 186 G +P Sbjct: 1361 GKTP 1364 Score = 28.1 bits (61), Expect(2) = 3e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL LP Sbjct: 1365 FEVVYGFNPLTPLDLLPLP 1383 >ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum] Length = 1191 Score = 72.4 bits (176), Expect(2) = 3e-13 Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAVTDMK--SWEENLLIIEFAYNYCSHSTT 174 LGT L FS +C+PQ DGQTEVVN L +LRA+ K SWE+ L I+EFAYN HS+T Sbjct: 1083 LGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSST 1142 Query: 175 GSSP 186 G +P Sbjct: 1143 GKTP 1146 Score = 28.1 bits (61), Expect(2) = 3e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL LP Sbjct: 1147 FEVVYGFNPLTPLDLLPLP 1165 >gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] Length = 1096 Score = 72.4 bits (176), Expect(2) = 3e-13 Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAVTDMK--SWEENLLIIEFAYNYCSHSTT 174 LGT L FS +C+PQ DGQTEVVN L +LRA+ K SWE+ L I+EFAYN HS+T Sbjct: 809 LGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSST 868 Query: 175 GSSP 186 G +P Sbjct: 869 GKTP 872 Score = 28.1 bits (61), Expect(2) = 3e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL LP Sbjct: 873 FEVVYGFNPLTPLDLLPLP 891 >gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051, E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1| putative polyprotein [Arabidopsis thaliana] Length = 1138 Score = 69.7 bits (169), Expect(2) = 6e-13 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K+WE+ L +EFAYN+ HS T Sbjct: 914 LGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSVHSAT 973 Query: 175 GSSP 186 SP Sbjct: 974 KFSP 977 Score = 29.6 bits (65), Expect(2) = 6e-13 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 177 FFSFQNVYSFNLLTPLDLTFLP 242 F FQ VY FN +TPLDL LP Sbjct: 975 FSPFQIVYGFNPITPLDLMPLP 996 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 68.6 bits (166), Expect(2) = 3e-12 Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K+WE+ L +EFAYN+ HS + Sbjct: 1539 LGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSAS 1598 Query: 175 GSSP 186 SP Sbjct: 1599 KFSP 1602 Score = 28.5 bits (62), Expect(2) = 3e-12 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = +3 Query: 177 FFSFQNVYSFNLLTPLDLTFLP 242 F FQ VY FN TPLDL LP Sbjct: 1600 FSPFQIVYGFNPTTPLDLMPLP 1621 >emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera] Length = 384 Score = 67.0 bits (162), Expect(2) = 3e-12 Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ+D QTEVVN+ L+ LLRA+ ++K+WEE L +EFAYN +S T Sbjct: 233 LGTKLLFSTTCHPQIDRQTEVVNMTLSTLLRAIIKKNIKTWEECLSHVEFAYNCTIYSAT 292 Query: 175 GSSP 186 SP Sbjct: 293 KFSP 296 Score = 30.0 bits (66), Expect(2) = 3e-12 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 177 FFSFQNVYSFNLLTPLDLTFLP 242 F F+ VY FN LTPLDL LP Sbjct: 294 FSPFEIVYGFNPLTPLDLRTLP 315 >ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine max] Length = 1520 Score = 68.6 bits (166), Expect(2) = 3e-12 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAVT--DMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ + KSW+E L +EFAYN H TT Sbjct: 1395 LGTKLLFSTTCHPQTDGQTEVVNRSLSTLLRALLKGNHKSWDEYLPHVEFAYNRGVHRTT 1454 Query: 175 GSSP 186 SP Sbjct: 1455 KQSP 1458 Score = 28.1 bits (61), Expect(2) = 3e-12 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL LP Sbjct: 1459 FEVVYGFNPLTPLDLIPLP 1477 >ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max] Length = 1176 Score = 69.3 bits (168), Expect(2) = 3e-12 Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 +GT L FS C+PQ DGQTEVVN L LLR V ++KSWE L +EFAYN HSTT Sbjct: 945 IGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNLKSWEACLPHVEFAYNRAVHSTT 1004 Query: 175 GSSP 186 SP Sbjct: 1005 NCSP 1008 Score = 27.3 bits (59), Expect(2) = 3e-12 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL +P Sbjct: 1009 FEIVYGFNPLTPLDLLPMP 1027 >emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] Length = 1173 Score = 67.4 bits (163), Expect(2) = 3e-12 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQ EVVN L+ LLR + ++K+WE+ L EFAYN HSTT Sbjct: 940 LGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWEDCLPFTEFAYNRSVHSTT 999 Query: 175 GSSP 186 SP Sbjct: 1000 SFSP 1003 Score = 29.3 bits (64), Expect(2) = 3e-12 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 177 FFSFQNVYSFNLLTPLDLTFLP 242 F F+ VY FN LTPLDL LP Sbjct: 1001 FSPFEIVYGFNPLTPLDLLPLP 1022 >ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max] Length = 612 Score = 68.9 bits (167), Expect(2) = 5e-12 Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 +GT L FS C+PQ DGQTEVVN L LLR V ++KSWE L +EFAYN HSTT Sbjct: 404 IGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKKNLKSWEACLPHVEFAYNRTVHSTT 463 Query: 175 GSSP 186 SP Sbjct: 464 NCSP 467 Score = 27.3 bits (59), Expect(2) = 5e-12 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY FN LTPLDL +P Sbjct: 468 FEIVYGFNPLTPLDLLPMP 486 >gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1713 Score = 70.9 bits (172), Expect(2) = 2e-11 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K WEE L +EFAYN HSTT Sbjct: 1351 LGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTT 1410 Query: 175 GSSP 186 P Sbjct: 1411 NMCP 1414 Score = 23.5 bits (49), Expect(2) = 2e-11 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY F L+P+DL LP Sbjct: 1415 FEVVYGFKPLSPIDLLPLP 1433 >gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza sativa Japonica Group] Length = 681 Score = 70.9 bits (172), Expect(2) = 2e-11 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K WEE L +EFAYN HSTT Sbjct: 319 LGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTT 378 Query: 175 GSSP 186 P Sbjct: 379 NMCP 382 Score = 23.5 bits (49), Expect(2) = 2e-11 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY F L+P+DL LP Sbjct: 383 FEVVYGFKPLSPIDLLPLP 401 >ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa Japonica Group] Length = 681 Score = 70.9 bits (172), Expect(2) = 2e-11 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ LLRA+ ++K WEE L +EFAYN HSTT Sbjct: 319 LGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTT 378 Query: 175 GSSP 186 P Sbjct: 379 NMCP 382 Score = 23.1 bits (48), Expect(2) = 2e-11 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 F+ VY F L P+DL LP Sbjct: 383 FEVVYGFKPLAPIDLLPLP 401 >emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] Length = 1124 Score = 73.6 bits (179), Expect = 3e-11 Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQMDGQTEVVN L+ LLR + ++K+WE L IEFAYN HSTT Sbjct: 888 LGTKLLFSTTCHPQMDGQTEVVNRTLSTLLRTIIQKNLKNWENCLPFIEFAYNQSVHSTT 947 Query: 175 GSSP 186 SP Sbjct: 948 NFSP 951 >gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group] Length = 1223 Score = 68.9 bits (167), Expect(2) = 6e-11 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Frame = +1 Query: 4 GTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTTG 177 GT L FS C+PQ DGQTEVVN L +LRA+ ++K WEE L +EFAYN +HSTT Sbjct: 897 GTKLLFSRTCHPQTDGQTEVVNCTLGTMLRAILKKNLKMWEECLPHVEFAYNRATHSTTK 956 Query: 178 SSP 186 SP Sbjct: 957 VSP 959 Score = 23.5 bits (49), Expect(2) = 6e-11 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 186 FQNVYSFNLLTPLDLTFLP 242 FQ VY FN P+D+ LP Sbjct: 960 FQVVYGFNPRAPIDILPLP 978 >gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] Length = 1717 Score = 72.0 bits (175), Expect = 8e-11 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ +LRAV T++K WEE L IEFAYN HSTT Sbjct: 1404 LGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTT 1463 Query: 175 GSSP 186 P Sbjct: 1464 KMCP 1467 >gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 889 Score = 71.6 bits (174), Expect = 1e-10 Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Frame = +1 Query: 1 LGTNLPFSIACYPQMDGQTEVVNLKLTQLLRAV--TDMKSWEENLLIIEFAYNYCSHSTT 174 LGT L FS C+PQ DGQTEVVN L+ +LRAV ++K WEE L +EFAYN+ HSTT Sbjct: 689 LGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNHSQHSTT 748 Query: 175 GSSP 186 P Sbjct: 749 KKCP 752