BLASTX nr result
ID: Catharanthus22_contig00042295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00042295
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006371854.1| pentatricopeptide repeat-containing family p... 75 9e-12
ref|XP_002332091.1| predicted protein [Populus trichocarpa] 75 9e-12
ref|XP_006450123.1| hypothetical protein CICLE_v10007859mg [Citr... 72 6e-11
ref|XP_006341672.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_004305601.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006598110.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
gb|EPS60163.1| hypothetical protein M569_14640, partial [Genlise... 65 1e-08
gb|EMJ26174.1| hypothetical protein PRUPE_ppa020759mg, partial [... 65 1e-08
gb|ESW05757.1| hypothetical protein PHAVU_011G207000g [Phaseolus... 64 2e-08
ref|XP_006394734.1| hypothetical protein EUTSA_v10003880mg [Eutr... 64 2e-08
emb|CCW28846.1| putative glycosyl phosphatidyl inositol transami... 64 2e-08
gb|ACU21279.1| unknown [Glycine max] 64 2e-08
emb|CCW28838.1| putative glycosyl phosphatidyl inositol transami... 64 3e-08
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006371810.1| hypothetical protein POPTR_0018s03860g, part... 62 1e-07
ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp.... 60 3e-07
gb|EXB60441.1| hypothetical protein L484_014894 [Morus notabilis] 59 7e-07
ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [A... 59 7e-07
dbj|BAC41999.1| unknown protein [Arabidopsis thaliana] 59 9e-07
ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [A... 59 9e-07
>ref|XP_006371854.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550318031|gb|ERP49651.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 532
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
++ YC+ EAE+LL K+ GL+IDHVPFQIL+K+YCKMKE D+A++LY +WL +K
Sbjct: 456 IRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRKWLAGNK 515
>ref|XP_002332091.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
++ YC+ EAE+LL K+ GL+IDHVPFQIL+K+YCKMKE D+A++LY +WL +K
Sbjct: 445 IRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRKWLTGNK 504
>ref|XP_006450123.1| hypothetical protein CICLE_v10007859mg [Citrus clementina]
gi|567916236|ref|XP_006450124.1| hypothetical protein
CICLE_v10007859mg [Citrus clementina]
gi|568860194|ref|XP_006483611.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g24830-like isoform X1 [Citrus sinensis]
gi|557553349|gb|ESR63363.1| hypothetical protein
CICLE_v10007859mg [Citrus clementina]
gi|557553350|gb|ESR63364.1| hypothetical protein
CICLE_v10007859mg [Citrus clementina]
Length = 572
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
+K +C G + EAE++ KIQ LGL IDH+PF+IL K+Y +MKE DKA ++++WL+R+K
Sbjct: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
>ref|XP_006341672.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Solanum tuberosum]
Length = 579
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/57 (47%), Positives = 41/57 (71%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLM 171
LK +C+ G + EA+ L K+ GL +DHVPF ILMK+YC+M E +K + L+++WL+
Sbjct: 519 LKVFCVQGMMREADKLFGKLMASGLAVDHVPFLILMKRYCRMGEFNKVFDLHQKWLV 575
>ref|XP_004305601.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Fragaria vesca subsp. vesca]
Length = 589
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMR 174
C+ G I EAE +L I G ++HVPF+IL KKYCKM+E DKA +Y++WL R
Sbjct: 527 CMRGNIKEAEKILATILASGFPVNHVPFKILFKKYCKMREPDKASGIYQKWLAR 580
>ref|XP_006598110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +1
Query: 10 YCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
+C+ GK+ EAE+L KI GL+ DHVP QI+ KYCK++E +A+K Y+ WL K
Sbjct: 270 FCIRGKMKEAEELYAKILKSGLLNDHVPVQIIFNKYCKLEEPVRAFKFYQDWLESKK 326
>gb|EPS60163.1| hypothetical protein M569_14640, partial [Genlisea aurea]
Length = 449
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQW 165
LKC CL G++ +AE + +++ GL +DHVPF ILMKKY KM ELD+ + LY +W
Sbjct: 389 LKCCCLRGEMRKAEWVFFELRISGLAVDHVPFMILMKKYFKMGELDRVHDLYLEW 443
>gb|EMJ26174.1| hypothetical protein PRUPE_ppa020759mg, partial [Prunus persica]
Length = 444
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYE 159
++ YC++G + +AE+L IQ GL IDHVPF++L+K+YCK+KE D A+ +Y+
Sbjct: 392 IRGYCMIGNMKKAEELFENIQASGLPIDHVPFKVLVKQYCKIKEPDMAFGIYQ 444
>gb|ESW05757.1| hypothetical protein PHAVU_011G207000g [Phaseolus vulgaris]
gi|561006764|gb|ESW05758.1| hypothetical protein
PHAVU_011G207000g [Phaseolus vulgaris]
Length = 582
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWL 168
++ +C+ G++ EAE+L KI GL+ DH+P QIL KYCK++E +A+ LY+ WL
Sbjct: 518 VRVFCIRGRMKEAEELYAKILKSGLLNDHIPVQILFNKYCKLEEPVRAFNLYQDWL 573
>ref|XP_006394734.1| hypothetical protein EUTSA_v10003880mg [Eutrema salsugineum]
gi|557091373|gb|ESQ32020.1| hypothetical protein
EUTSA_v10003880mg [Eutrema salsugineum]
Length = 590
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLM 171
C G++ EAE+LL ++Q G+ +DHVP+ IL+KKY +++ LDKA +Y++WLM
Sbjct: 518 CWKGRLQEAENLLFRMQASGITLDHVPYWILVKKYTRLRRLDKACLVYKKWLM 570
>emb|CCW28846.1| putative glycosyl phosphatidyl inositol transamidase like protein
[Arachis duranensis]
Length = 1428
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 10 YCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLM 171
+C+ G + EAE+L KI GL+ DHVP QIL YCK K L +A+ LY+QWL+
Sbjct: 1217 FCIRGDLKEAEELCAKILKSGLLNDHVPVQILFSTYCKRKRLFEAFNLYQQWLV 1270
>gb|ACU21279.1| unknown [Glycine max]
Length = 112
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 10 YCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
+C GK+ EAE+L KI GL+ DHVP QI+ KYCK++E +A+K Y+ WL K
Sbjct: 55 FCTRGKMKEAEELYAKILKSGLLNDHVPVQIIFNKYCKLEEPVRAFKFYQDWLESKK 111
>emb|CCW28838.1| putative glycosyl phosphatidyl inositol transamidase like protein
[Arachis ipaensis]
Length = 1542
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 10 YCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWL 168
+C+ G + EAE+L KI GL+ DHVP QIL YCK K L +A+ LY+QWL
Sbjct: 1289 FCIRGDLKEAEELCAKILKSGLLNDHVPVQILFSTYCKRKRLFEAFNLYQQWL 1341
>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like isoform X1 [Glycine max]
gi|571499056|ref|XP_006594389.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g24830-like isoform X2 [Glycine max]
gi|571499058|ref|XP_006594390.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g24830-like isoform X3 [Glycine max]
gi|571499060|ref|XP_006594391.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g24830-like isoform X4 [Glycine max]
Length = 577
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +1
Query: 10 YCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
+C+ GK+ EAE+L KI GL+ DHVP QIL KYCK+KE A+ Y+ WL K
Sbjct: 517 FCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQDWLESKK 573
>ref|XP_006371810.1| hypothetical protein POPTR_0018s03860g, partial [Populus
trichocarpa] gi|550317983|gb|ERP49607.1| hypothetical
protein POPTR_0018s03860g, partial [Populus trichocarpa]
Length = 418
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYK 150
++ YC+ EAE+LL K+ GL+ DHVPFQIL+K+YCKMKE D+A++
Sbjct: 369 IRGYCVKYNTKEAEELLAKLLKSGLLTDHVPFQILIKQYCKMKEPDRAFQ 418
>ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/53 (47%), Positives = 40/53 (75%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLM 171
C G++ EAE LL ++Q G+ +DHVPF IL+KKY +++ D+AY +Y++WL+
Sbjct: 519 CWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWLV 571
>gb|EXB60441.1| hypothetical protein L484_014894 [Morus notabilis]
Length = 591
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +1
Query: 1 LKCYCLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWLMRDK 180
++ +CL G ++EAE L K G ID VP++IL+K CKMK+LD A+ LY+ W R+K
Sbjct: 532 IRGHCLKGNLNEAEKLFAKALDSGPPIDDVPYKILIKYCCKMKKLDMAFYLYKVWSEREK 591
>ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [Amborella trichopoda]
gi|548852702|gb|ERN10796.1| hypothetical protein
AMTR_s00027p00227320 [Amborella trichopoda]
Length = 704
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQ 162
C+ G+ EA +LLVK++ + + +DHVP+ IL+ KYCK K+LD A+ LYE+
Sbjct: 613 CISGETHEAHELLVKMKKMDVPLDHVPYHILITKYCKEKQLDIAFDLYEE 662
>dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQWL 168
C G++ +AE LL +IQ G+ IDHVPF IL KKY +++ +AY +Y++WL
Sbjct: 521 CWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
>ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [Amborella trichopoda]
gi|548836472|gb|ERM97665.1| hypothetical protein
AMTR_s00130p00090930 [Amborella trichopoda]
Length = 654
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +1
Query: 13 CLLGKISEAEDLLVKIQGLGLIIDHVPFQILMKKYCKMKELDKAYKLYEQ 162
C+ GK EA +LLVK++ + + +DHVP+ IL+ KYCK K+L+ A+ LYE+
Sbjct: 563 CISGKTHEAHELLVKMKKMDVPLDHVPYHILITKYCKEKQLNIAFDLYEE 612