BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00042059
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    59   1e-12
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    59   1e-12
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594...    59   1e-12
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               62   2e-12
gb|AAP43914.1| integrase [Gossypium raimondii]                         62   1e-11
gb|AAP43919.1| integrase [Gossypium hirsutum]                          57   3e-10
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]    68   1e-09
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]    68   1e-09
emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]    67   3e-09
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]    67   3e-09
emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]    67   3e-09
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]    64   5e-09
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...    53   7e-09
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]    65   9e-09
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]    65   9e-09
gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]                 48   3e-08
emb|CAN83491.1| hypothetical protein VITISV_029198 [Vitis vinifera]    63   4e-08
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...    47   5e-08
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...    47   6e-08
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...    45   2e-07

>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 59.3 bits (142), Expect(2) = 1e-12
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 197  SNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLDDFL 30
            ++ALSRRY L+STL +KLLGF+ +K L AND D  + F  C  G F KF L D+FL
Sbjct: 1077 ADALSRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLGPFEKFNLQDEFL 1132



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 267  AKWLEFIE*FPYVICYKMGKK 205
            AKW+EFIE FPYVI YK GK+
Sbjct: 1053 AKWVEFIETFPYVIAYKQGKE 1073


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 59.3 bits (142), Expect(2) = 1e-12
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 197  SNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLDDFL 30
            ++ALSRRY L+STL +KLLGF+ +K L AND D  + F  C  G F KF L D+FL
Sbjct: 1077 ADALSRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLGPFEKFNLQDEFL 1132



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 267  AKWLEFIE*FPYVICYKMGKK 205
            AKW+EFIE FPYVI YK GK+
Sbjct: 1053 AKWVEFIETFPYVIAYKQGKE 1073


>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
          Length = 1191

 Score = 59.3 bits (142), Expect(2) = 1e-12
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 197  SNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLDDFL 30
            ++ALSRRY L+STL +KLLGF+ +K L AND D  + F  C  G F KF L D+FL
Sbjct: 834  ADALSRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLGPFEKFNLQDEFL 889



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMGKK 205
           AKW+EFIE FPYVI YK GK+
Sbjct: 810 AKWVEFIETFPYVIAYKQGKE 830


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 61.6 bits (148), Expect(2) = 2e-12
 Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
 Frame = -3

Query: 227  FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
            +VIK+++      ++ALSRRY LLS+L AKLLGFE +K L AND D  K + +C    FG
Sbjct: 1302 YVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSCEKFAFG 1361

Query: 56   KFTLLDDFLVW 24
            K+   D FL +
Sbjct: 1362 KYYRHDGFLFY 1372



 Score = 35.8 bits (81), Expect(2) = 2e-12
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 267  AKWLEFIE*FPYVICYKMGK 208
            A+W+EFIE FPYVI YK GK
Sbjct: 1291 ARWVEFIETFPYVIKYKKGK 1310


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score = 62.0 bits (149), Expect(2) = 1e-11
 Identities = 33/63 (52%), Positives = 42/63 (66%)
 Frame = -3

Query: 218 KWERKCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLD 39
           K +    ++ALSRRYTLLSTL  KLLGFE+LK+L A D D +  + AC +G F KF   D
Sbjct: 87  KGKDNIVADALSRRYTLLSTLHTKLLGFEYLKDLYATDSDFASIYDACEHGAFHKFYKHD 146

Query: 38  DFL 30
            +L
Sbjct: 147 GYL 149



 Score = 33.1 bits (74), Expect(2) = 1e-11
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMGK 208
           A+W+EFIE FPY I YK GK
Sbjct: 70  ARWVEFIESFPYGIRYKKGK 89


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score = 56.6 bits (135), Expect(2) = 3e-10
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -3

Query: 197 SNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLDDFL 30
           ++ALSRRYTL++TL AK+LGFE +KEL  +D D S  +  C +  F KF L+D  L
Sbjct: 94  ADALSRRYTLITTLNAKVLGFEHIKELYDDDTDFSHIYKNCGHTAFEKFYLVDGLL 149



 Score = 33.5 bits (75), Expect(2) = 3e-10
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMG 211
           A+W+EFIE FPY+I YK+G
Sbjct: 70  ARWVEFIETFPYMIQYKIG 88


>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
          Length = 364

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
 Frame = -3

Query: 227 FVIKWERKCASN----ALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGF 60
           +VIK+ ++C  N    ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    F
Sbjct: 81  YVIKY-KQCKENIVADALSRRYALVSTLNAKLLGFEYVKELYANDNDFASVYGACEKTAF 139

Query: 59  GKFTLLDDFLVWRGNCGC 6
           GKF  LD +L +R N  C
Sbjct: 140 GKFYRLDGYL-FRKNILC 156


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +V+K+++       NALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FG
Sbjct: 564 YVVKYKQGKENIVVNALSRRYALVSTLNAKLLGFEYVKELYANDNDFASLYGACEKAAFG 623

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 624 KFYRLDGYL 632


>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
          Length = 1159

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++       +ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FG
Sbjct: 776 YVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDLASVYGACEKAAFG 835

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 836 KFYRLDGYL 844


>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
          Length = 366

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++       +ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FG
Sbjct: 81  YVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDLASVYGACEKAAFG 140

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 141 KFYRLDGYL 149


>emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]
          Length = 337

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++      ++ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FG
Sbjct: 80  YVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYANDDDFASVYGACEKVAFG 139

Query: 56  KFTLLDDFLVWRGNCGC 6
           KF  LD +L +R N  C
Sbjct: 140 KFYRLDGYL-FRDNRLC 155


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score = 64.3 bits (155), Expect(2) = 5e-09
 Identities = 33/56 (58%), Positives = 41/56 (73%)
 Frame = -3

Query: 197  SNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLDDFL 30
            ++ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FGKF  LD +L
Sbjct: 874  ADALSRRYALVSTLNAKLLGFEYVKELYANDDDFASVYGACEKTXFGKFYRLDGYL 929



 Score = 21.6 bits (44), Expect(2) = 5e-09
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 240 FPYVICYKMGKK 205
           FPYV  YK GK+
Sbjct: 859 FPYVXKYKQGKE 870


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score = 52.8 bits (125), Expect(2) = 7e-09
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
 Frame = -3

Query: 227  FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
            +VIK+++      ++ALS+RYTLLSTL  KL+GFE +KE+   D D  + + AC     G
Sbjct: 811  YVIKYKKGKDNVVADALSQRYTLLSTLNVKLMGFEQIKEVYETDHDFQEVYKACEKFASG 870

Query: 56   KFTLLDDFLVW 24
            ++   D FL +
Sbjct: 871  RYFRQDKFLFY 881



 Score = 32.7 bits (73), Expect(2) = 7e-09
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMGK 208
           A+W+EFIE F YVI YK GK
Sbjct: 800 ARWVEFIETFAYVIKYKKGK 819


>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
          Length = 1115

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++       +ALSRRY L+STL AKLLGFE++KEL AND D S  + AC    FG
Sbjct: 757 YVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDFSSVYGACEKITFG 816

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 817 KFYRLDGYL 825


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++       +ALSRRY L+STL AKLLGFE++KEL AND D +  + AC    FG
Sbjct: 703 YVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDFASVYGACEKVAFG 762

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 763 KFYRLDGYL 771


>gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]
          Length = 287

 Score = 48.1 bits (113), Expect(2) = 3e-08
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = -3

Query: 218 KWERKCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NG-GFGKFTLL 42
           K +    ++ALSRRYTLL+ L  K+ G E +K+   ND D     + C +G G+ KF + 
Sbjct: 213 KGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVNDADFKDVLLHCKDGKGWNKFIIS 272

Query: 41  DDFLVWRGNCGC 6
           D F V+R N  C
Sbjct: 273 DGF-VFRANKLC 283



 Score = 35.4 bits (80), Expect(2) = 3e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMGKK 205
           AKW+EFIE FPYVI +K GK+
Sbjct: 196 AKWVEFIESFPYVIKHKKGKE 216


>emb|CAN83491.1| hypothetical protein VITISV_029198 [Vitis vinifera]
          Length = 274

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 227 FVIKWER---KCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFG 57
           +VIK+++      ++ALSRRY L+STL AKLLGFE++KEL AN  D +  + AC    FG
Sbjct: 118 YVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYANADDFASVYGACEKVAFG 177

Query: 56  KFTLLDDFL 30
           KF  LD +L
Sbjct: 178 KFYRLDGYL 186


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score = 47.0 bits (110), Expect(2) = 5e-08
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -3

Query: 218  KWERKCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLD 39
            K +    +NALSRRYTLL+ L  K+ G E +K+  A+D D +   + C +G      +++
Sbjct: 1095 KGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVIN 1154

Query: 38   DFLVWRGNCGC 6
            D  V+R N  C
Sbjct: 1155 DGFVFRANKLC 1165



 Score = 35.4 bits (80), Expect(2) = 5e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 267  AKWLEFIE*FPYVICYKMGKK 205
            AKW+EFIE FPYVI +K GK+
Sbjct: 1078 AKWVEFIESFPYVIKHKKGKE 1098


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score = 47.0 bits (110), Expect(2) = 6e-08
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -3

Query: 218 KWERKCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLD 39
           K +    +NALSRRYTLL+ L  K+ G E +K+  A+D D +   + C +G      +++
Sbjct: 449 KGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVIN 508

Query: 38  DFLVWRGNCGC 6
           D  V+R N  C
Sbjct: 509 DGFVFRANKLC 519



 Score = 35.4 bits (80), Expect(2) = 6e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 267 AKWLEFIE*FPYVICYKMGKK 205
           AKW+EFIE FPYVI +K GK+
Sbjct: 432 AKWVEFIESFPYVIKHKKGKE 452


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = -3

Query: 218  KWERKCASNALSRRYTLLSTLKAKLLGFEFLKELDANDVDCSKSFVAC*NGGFGKFTLLD 39
            K +    ++ALSRRYTLL+ L  K+ G E +K+  A+D D +   + C +G      +++
Sbjct: 1116 KGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVIN 1175

Query: 38   DFLVWRGNCGC 6
            D  V+R N  C
Sbjct: 1176 DGFVFRANKLC 1186



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 267  AKWLEFIE*FPYVICYKMGKK 205
            AKW+EFIE FPYVI +K GK+
Sbjct: 1099 AKWVEFIESFPYVIKHKKGKE 1119