BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00042011
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
gb|EMJ23067.1| hypothetical protein PRUPE_ppa018370mg, partial [...    78   1e-12
ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citr...    65   1e-08
ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutr...    64   2e-08
gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus...    63   5e-08
ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Caps...    61   1e-07
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...    58   1e-06
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...    57   3e-06
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...    57   3e-06

>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum tuberosum]
          Length = 599

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 51/110 (46%), Positives = 67/110 (60%)
 Frame = -1

Query: 337 RLIKRFISTSVTGTLLSNLDYYIANVKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFIL 158
           ++I+RFIST      LS+       +K L++KG   +A++LY   VH    S  S+ F+L
Sbjct: 3   KIIQRFIST------LSSFSEVHNTIKQLVVKGKYDQALELYTAKVHC---SDASSTFLL 53

Query: 157 PSIIKACAHSQTHKSLAHLLHSSTLKNGFDSECTVSNSLISHYSKFSDTK 8
           PSIIKAC H Q        LHS  LKNG+ SEC +SNSLIS Y+KF +TK
Sbjct: 54  PSIIKACVHDQL---FGLQLHSYVLKNGYSSECAISNSLISMYAKFFETK 100


>ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum lycopersicum]
          Length = 603

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 52/108 (48%), Positives = 64/108 (59%)
 Frame = -1

Query: 331 IKRFISTSVTGTLLSNLDYYIANVKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPS 152
           IKRFIST     L S        +K L++KG   +A++LY   VH    SH S+ F+LPS
Sbjct: 5   IKRFIST-----LSSPFSEVHNTIKQLVVKGKYDQALELYTAKVHC---SHTSSTFLLPS 56

Query: 151 IIKACAHSQTHKSLAHLLHSSTLKNGFDSECTVSNSLISHYSKFSDTK 8
           IIKAC H Q        LHS  LKNG+ SE  +SNSLIS Y+KF +TK
Sbjct: 57  IIKACVHDQL---FGFQLHSYVLKNGYSSESAISNSLISMYAKFFETK 101


>gb|EMJ23067.1| hypothetical protein PRUPE_ppa018370mg, partial [Prunus persica]
          Length = 412

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 46/106 (43%), Positives = 71/106 (66%)
 Frame = -1

Query: 334 LIKRFISTSVTGTLLSNLDYYIANVKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILP 155
           +I+RF S+      +S L++    +KDL++KGL  + ++LY + +HP F  H ++ FILP
Sbjct: 5   VIRRFTSSLSPALTISALNF---KIKDLVVKGLYDQILRLYKQELHP-FGLHANS-FILP 59

Query: 154 SIIKACAHSQTHKSLAHLLHSSTLKNGFDSECTVSNSLISHYSKFS 17
           SIIKAC+++ +H      LH  +LK+G DS+  VSNSLIS Y+KF+
Sbjct: 60  SIIKACSYAMSHH-FGLQLHCLSLKSGCDSDPVVSNSLISMYAKFT 104


>ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citrus clementina]
           gi|557556380|gb|ESR66394.1| hypothetical protein
           CICLE_v10007840mg [Citrus clementina]
          Length = 580

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/71 (46%), Positives = 48/71 (67%)
 Frame = -1

Query: 229 KAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKSLAHLLHSSTLKNGFDSECTVS 50
           + + LY + +HP      +A  ILPS+IKACA++QTH+     LH + LK+G D++  +S
Sbjct: 9   QTLHLYKQELHPSGLYSNTA--ILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66

Query: 49  NSLISHYSKFS 17
           NSLIS Y+KFS
Sbjct: 67  NSLISMYAKFS 77


>ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutrema salsugineum]
           gi|557113804|gb|ESQ54087.1| hypothetical protein
           EUTSA_v10024712mg [Eutrema salsugineum]
          Length = 602

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = -1

Query: 289 SNLDYYIAN-VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKS 113
           S L+  + N +K L+ + L+ +A++LY + +HP+  +  +A  ILPS+IKAC+       
Sbjct: 10  SRLNLELGNKLKGLVSEQLHDEALRLYKQKIHPLGTNGFTA--ILPSVIKACSFQHEPFL 67

Query: 112 LAHLLHSSTLKNGFDSECTVSNSLISHYSKFSDT 11
           L   +H   LK+G D +  VSNSLIS Y+KFS T
Sbjct: 68  LGEQIHCLCLKSGADRDTVVSNSLISMYAKFSTT 101


>gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
          Length = 607

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/86 (40%), Positives = 56/86 (65%)
 Frame = -1

Query: 262 VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKSLAHLLHSSTL 83
           +K  L KGL  + ++L+ + +H  F +H S  F+LPS+I+A + +Q+H + A  LH   L
Sbjct: 23  IKTFLSKGLYYQILQLFTQ-LH--FSAHSSIPFLLPSVIRASSSAQSH-AFATQLHCFAL 78

Query: 82  KNGFDSECTVSNSLISHYSKFSDTKN 5
           K  + SE  VSNS+I+ Y+KFSD ++
Sbjct: 79  KTAYHSEAVVSNSIITMYAKFSDVES 104


>ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Capsella rubella]
           gi|482552081|gb|EOA16274.1| hypothetical protein
           CARUB_v10004419mg [Capsella rubella]
          Length = 598

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/84 (41%), Positives = 52/84 (61%)
 Frame = -1

Query: 262 VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKSLAHLLHSSTL 83
           +K L+ + L+ +A++LY   +HP+  +  +A  ILPS+IKAC+  Q    L   LH    
Sbjct: 17  LKGLVSEQLHDEALRLYKLDIHPLGTNGFTA--ILPSVIKACSFQQEPFLLGTQLHCLCF 74

Query: 82  KNGFDSECTVSNSLISHYSKFSDT 11
           K+G D +  +SNSLIS Y+KFS T
Sbjct: 75  KSGADRDTVISNSLISLYAKFSST 98


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = -1

Query: 262 VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKSLAHLLHSSTL 83
           +K  L KGL  + ++L++E +H     H S  F LPS+IKA + +Q H +    LH   L
Sbjct: 23  IKSFLSKGLYHQTLQLFSE-LH--LCGHSSISFFLPSVIKASSSAQCH-TFGTQLHCLAL 78

Query: 82  KNGFDSECTVSNSLISHYSKFSD 14
           K G  SE  VSNS+I+ Y KFSD
Sbjct: 79  KTGSHSETVVSNSIITMYFKFSD 101


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -1

Query: 289 SNLDYYIAN-VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTHKS 113
           S L+  + N +K L+   L+ +A++LY  ++HP+  +  +A  ILPS+IKAC+  Q    
Sbjct: 7   SRLNLELGNKLKGLVSGQLHDEALRLYKLNIHPLGTNGFTA--ILPSVIKACSFQQEPFL 64

Query: 112 LAHLLHSSTLKNGFDSECTVSNSLISHYSKFS 17
           L   LH    K+G D +  VSNSLIS Y+K S
Sbjct: 65  LGAQLHCLCFKSGADRDTVVSNSLISMYAKLS 96


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = -1

Query: 295 LLSNLDYYIAN-VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTH 119
           L S L+  + N +K L+      +A++LY   +H +  +  +A  ILPS+IKACA  Q  
Sbjct: 16  LSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTA--ILPSVIKACAFQQEP 73

Query: 118 KSLAHLLHSSTLKNGFDSECTVSNSLISHYSKFS 17
             L   LH   LK G D +  VSNSLIS Y+KFS
Sbjct: 74  FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFS 107


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = -1

Query: 295 LLSNLDYYIAN-VKDLLLKGLNGKAVKLYAEHVHPVFPSHESAVFILPSIIKACAHSQTH 119
           L S L+  + N +K L+      +A++LY   +H +  +  +A  ILPS+IKACA  Q  
Sbjct: 5   LSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTA--ILPSVIKACAFQQEP 62

Query: 118 KSLAHLLHSSTLKNGFDSECTVSNSLISHYSKFS 17
             L   LH   LK G D +  VSNSLIS Y+KFS
Sbjct: 63  FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFS 96