BLASTX nr result
ID: Catharanthus22_contig00042009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00042009
(391 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group] 75 3e-17
gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group] 75 3e-17
gb|AAN31788.1| Putative polyprotein [Oryza sativa Japonica Group... 81 1e-16
dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativ... 79 1e-16
emb|CAJ86273.1| H0901F07.10 [Oryza sativa Indica Group] 75 2e-16
emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis] 78 3e-16
emb|CAE05745.1| OSJNBb0017I01.25 [Oryza sativa Japonica Group] g... 74 3e-16
emb|CAE05529.2| OSJNBa0053B21.3 [Oryza sativa Japonica Group] gi... 79 3e-16
gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subc... 74 3e-16
gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 3e-16
gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 3e-16
emb|CAH66039.1| H0515C11.15 [Oryza sativa Indica Group] gi|11630... 74 4e-16
gb|AAX96629.1| retrotransposon protein, putative, Ty3-gypsy sub-... 73 5e-16
gb|ABA93256.2| retrotransposon protein, putative, Ty3-gypsy subc... 73 5e-16
emb|CAE02129.2| OSJNBa0035M09.13 [Oryza sativa Japonica Group] 77 5e-16
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854... 89 8e-16
emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera] 89 8e-16
gb|ABA94864.1| retrotransposon protein, putative, unclassified [... 77 8e-16
gb|AAX94963.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 8e-16
gb|AAV33321.1| putative polyprotein [Oryza sativa Japonica Group] 77 1e-15
>gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1672
Score = 75.5 bits (184), Expect(2) = 3e-17
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L FLDA+ GYH I M+ E+ EKT FIT S+FCY P
Sbjct: 793 KDHFPLPRIDQLVDSTAGCELLNFLDAYSGYHQISMAKEDEEKTAFITPFSVFCYVKMPF 852
Query: 143 G 141
G
Sbjct: 853 G 853
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWL-KMPSKIQQMVNNILESIFGG----YVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF L + Q+MV L G YVDD+++K K N L D+WE FD +
Sbjct: 850 MPFGLITARNTFQRMVQGALNDQLGNNVEAYVDDIVVKTKTGNSLIDDLWETFDNL 905
>gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 75.5 bits (184), Expect(2) = 3e-17
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L FLDA+ GYH I M+ E+ EKT FIT S+FCY P
Sbjct: 501 KDHFPLPRIDQLVDSTAGCELLNFLDAYSGYHQISMAKEDEEKTAFITPFSVFCYVKMPF 560
Query: 143 G 141
G
Sbjct: 561 G 561
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWL-KMPSKIQQMVNNILESIFGG----YVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF L + Q+MV L G YVDD+++K K N L D+WE FD +
Sbjct: 558 MPFGLITARNTFQRMVQGALNDQLGNNVEAYVDDIVVKTKTGNSLIDDLWETFDNL 613
>gb|AAN31788.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31431648|gb|AAP53392.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 2027
Score = 81.3 bits (199), Expect(3) = 1e-16
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K +PLPRIDQ+VD GH++LCFLDA+ GYH I M+ E+ EKT FIT +CYT+ P
Sbjct: 893 KDPYPLPRIDQIVDSTAGHDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTYCYTSMPF 952
Query: 143 G*K 135
G K
Sbjct: 953 GLK 955
Score = 29.3 bits (64), Expect(3) = 1e-16
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSKIQQMVNNI-LESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q I L S G YVDDL++K + L +D+ E F+ +
Sbjct: 950 MPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFENL 1005
Score = 20.8 bits (42), Expect(3) = 1e-16
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 361 MSLGYTDLNKA 329
M + YTDLNKA
Sbjct: 880 MCIDYTDLNKA 890
>dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativa Japonica Group]
Length = 1739
Score = 79.3 bits (194), Expect(3) = 1e-16
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRID++VD TG ++LCFLDA+ GYH I M+ E+ EKT FIT FCYT P
Sbjct: 843 KDPFPLPRIDKIVDSTTGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTFCYTTMPF 902
Query: 143 G*K 135
G K
Sbjct: 903 GLK 905
Score = 30.4 bits (67), Expect(3) = 1e-16
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSK-IQQMVNNILESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q+M L + G YVDDL++K + + L D+ E FD +
Sbjct: 900 MPFGLKNAGPTFQRMTCITLSNQIGHNVEAYVDDLVVKTRHQDTLQQDLAETFDSL 955
Score = 21.6 bits (44), Expect(3) = 1e-16
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + YTDLNKA + F P
Sbjct: 830 MCIDYTDLNKACPKDPFPLP 849
>emb|CAJ86273.1| H0901F07.10 [Oryza sativa Indica Group]
Length = 1884
Score = 74.7 bits (182), Expect(3) = 2e-16
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L FLDA+ GYH I M+ E+ EKT FIT +FCY P
Sbjct: 1010 KDHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQISMAKEDEEKTAFITPFGVFCYVKMPF 1069
Query: 143 G 141
G
Sbjct: 1070 G 1070
Score = 35.0 bits (79), Expect(3) = 2e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q ++N L + YVDD+++K K + L D+WE FD +
Sbjct: 1082 VQGALSNQLGNNVEAYVDDIVVKTKTGDSLIDDLWETFDNL 1122
Score = 20.8 bits (42), Expect(3) = 2e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 997 MCVDFTDLNKACPKDHFPLP 1016
>emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis]
Length = 1335
Score = 78.2 bits (191), Expect(2) = 3e-16
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -3
Query: 314 FPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPSG*K 135
FPLPRIDQ+VD G EVL FLDA+ GYH I M L++ EKTTFIT IFCY P G K
Sbjct: 608 FPLPRIDQLVDSTVGCEVLSFLDAYSGYHQINMCLDDEEKTTFITPFGIFCYVKMPFGLK 667
Score = 32.3 bits (72), Expect(2) = 3e-16
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = -2
Query: 153 MPFWLKMP-SKIQQMVNNILESIFG----GYVDDLILKP-KRMNDLPTDMWEIFDRI 1
MPF LK + Q++ + S G YVDDL++K KR+N + TD+ E FD I
Sbjct: 662 MPFGLKNAGASFQRLTQSTFSSQLGRNLEAYVDDLVVKSIKRLNHI-TDLQETFDNI 717
>emb|CAE05745.1| OSJNBb0017I01.25 [Oryza sativa Japonica Group]
gi|32488627|emb|CAE03420.1| OSJNBa0032F06.3 [Oryza sativa
Japonica Group]
Length = 1728
Score = 74.3 bits (181), Expect(3) = 3e-16
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L FLDA+ GYH I M+ E+ EKT FIT +FCY P
Sbjct: 998 KDHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQISMAKEDEEKTAFITPFRVFCYVKMPF 1057
Query: 143 G 141
G
Sbjct: 1058 G 1058
Score = 35.0 bits (79), Expect(3) = 3e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q ++N L + YVDD+++K K + L D+WE FD +
Sbjct: 1070 VQGALSNQLGNNVEAYVDDIVVKTKTGDSLIDDLWETFDNL 1110
Score = 20.8 bits (42), Expect(3) = 3e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 985 MCVDFTDLNKACPKDHFPLP 1004
>emb|CAE05529.2| OSJNBa0053B21.3 [Oryza sativa Japonica Group]
gi|38347235|emb|CAE05030.2| OSJNBa0044M19.17 [Oryza
sativa Japonica Group]
Length = 1802
Score = 78.6 bits (192), Expect(4) = 3e-16
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K +PLPRIDQ+VD G ++LCFLDA+ GYH I M+ E+ EKTTFIT +CYT P
Sbjct: 806 KDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTTFITPIGTYCYTTMPF 865
Query: 143 G*K 135
G K
Sbjct: 866 GLK 868
Score = 28.9 bits (63), Expect(4) = 3e-16
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSKIQQMVNNI-LESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q I L S G YVDDL++K + L +D+ E F+ +
Sbjct: 863 MPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDDLVVKTRNQETLLSDLAETFESL 918
Score = 21.2 bits (43), Expect(4) = 3e-16
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 384 WLVNPVIV 361
WLVNPV+V
Sbjct: 777 WLVNPVVV 784
Score = 20.8 bits (42), Expect(4) = 3e-16
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 361 MSLGYTDLNKA 329
M + YTDLNKA
Sbjct: 793 MCIDYTDLNKA 803
>gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 73.9 bits (180), Expect(3) = 3e-16
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L F+DA+ GYH I M+ E+ EKT+FIT +FCY P
Sbjct: 923 KDHFPLPRIDQLVDSTAGCELLSFIDAYSGYHQISMAKEDEEKTSFITPFRVFCYVKMPF 982
Query: 143 G 141
G
Sbjct: 983 G 983
Score = 35.4 bits (80), Expect(3) = 3e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q +++ L S YVDD+++K K + L D+WE FD +
Sbjct: 995 VQGALSDQLGSNVEAYVDDIVVKTKTFDSLIDDLWETFDNL 1035
Score = 20.8 bits (42), Expect(3) = 3e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 910 MCVDFTDLNKACPKDHFPLP 929
>gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1403
Score = 73.9 bits (180), Expect(3) = 3e-16
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L F+DA+ GYH I M+ E+ EKT+FIT +FCY P
Sbjct: 913 KDHFPLPRIDQLVDSTAGCELLSFIDAYSGYHQISMAKEDEEKTSFITPFRVFCYVKMPF 972
Query: 143 G 141
G
Sbjct: 973 G 973
Score = 35.4 bits (80), Expect(3) = 3e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q +++ L S YVDD+++K K + L D+WE FD +
Sbjct: 985 VQGALSDQLGSNVEAYVDDIVVKTKTFDSLIDDLWETFDNL 1025
Score = 20.8 bits (42), Expect(3) = 3e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 900 MCVDFTDLNKACPKDHFPLP 919
>gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1380
Score = 73.9 bits (180), Expect(3) = 3e-16
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD G E+L F+DA+ GYH I M+ E+ EKT+FIT +FCY P
Sbjct: 890 KDHFPLPRIDQLVDSTAGCELLSFIDAYSGYHQISMAKEDEEKTSFITPFRVFCYVKMPF 949
Query: 143 G 141
G
Sbjct: 950 G 950
Score = 35.4 bits (80), Expect(3) = 3e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q +++ L S YVDD+++K K + L D+WE FD +
Sbjct: 962 VQGALSDQLGSNVEAYVDDIVVKTKTFDSLIDDLWETFDNL 1002
Score = 20.8 bits (42), Expect(3) = 3e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 877 MCVDFTDLNKACPKDHFPLP 896
>emb|CAH66039.1| H0515C11.15 [Oryza sativa Indica Group]
gi|116309145|emb|CAH66246.1| OSIGBa0101A01.2 [Oryza
sativa Indica Group]
Length = 1369
Score = 74.3 bits (181), Expect(2) = 4e-16
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = -3
Query: 314 FPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPSG 141
FPLPRIDQ+VD TG E+L FLDA+ GYH I M+ E+ EKT FI +FCY P G
Sbjct: 649 FPLPRIDQLVDSTTGCELLSFLDAYSGYHQISMAKEDEEKTAFIAPFGVFCYVKMPFG 706
Score = 35.8 bits (81), Expect(2) = 4e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q ++N L + YVDD+++K K + L D+WE FD +
Sbjct: 718 VQGALSNQLGNNVEAYVDDIVVKTKTTDSLIDDLWETFDNL 758
>gb|AAX96629.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1647
Score = 73.2 bits (178), Expect(3) = 5e-16
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRID +VD G E+L FLDA+ GYH I M+ E+ EKT+FIT +FCY P
Sbjct: 585 KDHFPLPRIDHLVDSTAGCELLSFLDAYSGYHQISMAKEDEEKTSFITPFGVFCYVKMPF 644
Query: 143 G 141
G
Sbjct: 645 G 645
Score = 35.8 bits (81), Expect(3) = 5e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q +N+ L + YVDD+++K K + L D+WE FD +
Sbjct: 657 VQGALNDQLGNNVEAYVDDIVVKTKTSDSLIDDLWETFDNL 697
Score = 20.4 bits (41), Expect(3) = 5e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 572 MCVDFTDLNKASPKDHFPLP 591
>gb|ABA93256.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1371
Score = 73.2 bits (178), Expect(3) = 5e-16
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRID +VD G E+L FLDA+ GYH I M+ E+ EKT+FIT +FCY P
Sbjct: 585 KDHFPLPRIDHLVDSTAGCELLSFLDAYSGYHQISMAKEDEEKTSFITPFGVFCYVKMPF 644
Query: 143 G 141
G
Sbjct: 645 G 645
Score = 35.8 bits (81), Expect(3) = 5e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 123 IQQMVNNILESIFGGYVDDLILKPKRMNDLPTDMWEIFDRI 1
+Q +N+ L + YVDD+++K K + L D+WE FD +
Sbjct: 657 VQGALNDQLGNNVEAYVDDIVVKTKTSDSLIDDLWETFDNL 697
Score = 20.4 bits (41), Expect(3) = 5e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 572 MCVDFTDLNKASPKDHFPLP 591
>emb|CAE02129.2| OSJNBa0035M09.13 [Oryza sativa Japonica Group]
Length = 1297
Score = 77.0 bits (188), Expect(3) = 5e-16
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K +PLPRIDQ+VD G ++LCFLDA+ GYH I M+ E+ EKT FIT +CYT+ P
Sbjct: 525 KDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTYCYTSMPF 584
Query: 143 G*K 135
G K
Sbjct: 585 GLK 587
Score = 31.6 bits (70), Expect(3) = 5e-16
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSKIQQMVNNI-LESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q I L S G YVDDL++K + + L +D+ EIF+ +
Sbjct: 582 MPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQDTLLSDLAEIFENL 637
Score = 20.8 bits (42), Expect(3) = 5e-16
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 361 MSLGYTDLNKA 329
M + YTDLNKA
Sbjct: 512 MCIDYTDLNKA 522
>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
Length = 955
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD GHEVL FLDAF GYH IPM+ E+ EKTTFIT ++CY P
Sbjct: 655 KDSFPLPRIDQIVDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPF 714
Query: 143 G*K-CQAKSNKW*TIFWNPYLG 81
G K A K T + P +G
Sbjct: 715 GLKNAGATYQKLMTKIFKPLIG 736
>emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]
Length = 835
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K FPLPRIDQ+VD GHEVL FLDAF GYH IPM+ E+ EKTTFIT ++CY P
Sbjct: 87 KDSFPLPRIDQIVDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPF 146
Query: 143 G*K-CQAKSNKW*TIFWNPYLG 81
G K A K T + P +G
Sbjct: 147 GLKNAGATYQKLMTKIFKPLIG 168
>gb|ABA94864.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1911
Score = 76.6 bits (187), Expect(4) = 8e-16
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K +PLPRIDQ+VD G ++LCFLDA+ GYH I M+ E+ EKT FIT +CYT P
Sbjct: 812 KDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPF 871
Query: 143 G*K 135
G K
Sbjct: 872 GLK 874
Score = 29.3 bits (64), Expect(4) = 8e-16
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSKIQQMVNNI-LESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q I L S G YVDDL++K + L +D+ E F+ +
Sbjct: 869 MPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQESLLSDLAETFESL 924
Score = 21.2 bits (43), Expect(4) = 8e-16
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 384 WLVNPVIV 361
WLVNPV+V
Sbjct: 783 WLVNPVVV 790
Score = 20.8 bits (42), Expect(4) = 8e-16
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 361 MSLGYTDLNKA 329
M + YTDLNKA
Sbjct: 799 MCIDYTDLNKA 809
>gb|AAX94963.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77549877|gb|ABA92674.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 759
Score = 73.9 bits (180), Expect(3) = 8e-16
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACP 147
K FPLP+IDQ+VD G E+L FLDA+ YHHI M+ E+ EKTTFIT +FCY P
Sbjct: 267 KDHFPLPQIDQLVDSTAGCELLSFLDAYSSYHHINMAKEDEEKTTFITPFGVFCYVKMP 325
Score = 33.9 bits (76), Expect(3) = 8e-16
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Frame = -2
Query: 156 GMPFWLKMPSKI-------QQMVNNILESIFGG----YVDDLILKPKRMNDLPTDMWEIF 10
G+ ++KMP ++ Q+MV L G Y+DD+++K K+ + L D+ E+F
Sbjct: 317 GVFCYVKMPFRLITTRNTFQRMVQGALNDQLGNNVEAYIDDIVVKTKKSDSLIDDLQEMF 376
Query: 9 DRI 1
D +
Sbjct: 377 DNL 379
Score = 20.8 bits (42), Expect(3) = 8e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 361 MSLGYTDLNKAI*RSFFLCP 302
M + +TDLNKA + F P
Sbjct: 254 MCVDFTDLNKACPKDHFPLP 273
>gb|AAV33321.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2027
Score = 77.0 bits (188), Expect(3) = 1e-15
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = -3
Query: 323 KKLFPLPRIDQVVDVVTGHEVLCFLDAFKGYHHIPMSLEEMEKTTFITDDSIFCYTACPS 144
K +PLPRIDQ+VD G ++LCFLDA+ GYH I M+ E+ EKT FIT +CYT+ P
Sbjct: 893 KDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTSMPF 952
Query: 143 G*K 135
G K
Sbjct: 953 GLK 955
Score = 30.4 bits (67), Expect(3) = 1e-15
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -2
Query: 153 MPFWLKMPSKIQQMVNNI-LESIFG----GYVDDLILKPKRMNDLPTDMWEIFDRI 1
MPF LK Q I L S G YVDDL++K + L TD+ E F+ +
Sbjct: 950 MPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDDLVVKTRNQETLLTDLAETFESL 1005
Score = 20.8 bits (42), Expect(3) = 1e-15
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 361 MSLGYTDLNKA 329
M + YTDLNKA
Sbjct: 880 MCIDYTDLNKA 890