BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00041880
         (759 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-102
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi...   373   e-101
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   343   4e-92
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]   341   1e-91
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi...   328   2e-87
gb|ESW20590.1| hypothetical protein PHAVU_006G221900g [Phaseolus...   305   1e-80
ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containi...   302   9e-80
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...   296   5e-78
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab...   295   1e-77
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi...   294   3e-77
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi...   293   3e-77
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ...   290   5e-76
ref|XP_003624021.1| Pentatricopeptide repeat-containing protein ...   289   8e-76
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps...   279   6e-73
gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isof...   269   7e-70
gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isof...   269   7e-70
ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutr...   265   1e-68
gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus pe...   256   6e-66
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,...   253   5e-65
ref|XP_004485903.1| PREDICTED: pentatricopeptide repeat-containi...   252   1e-64

>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum tuberosum]
          Length = 758

 Score =  378 bits (970), Expect = e-102
 Identities = 174/253 (68%), Positives = 213/253 (84%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           KQ HA L Q SL   NYWVA LI LCTR HAPP Y + +F+S  QPNVF+FTN+LKF+SQ
Sbjct: 18  KQLHAQLFQRSLCSDNYWVAQLIKLCTRLHAPPTYVSRVFDSVHQPNVFIFTNILKFYSQ 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
            GA SDVL LFD+MQK +V PDAFVYP+LIK++GK G+ FHAH +KMG D D+++ N IM
Sbjct: 78  LGAHSDVLYLFDKMQKCNVAPDAFVYPILIKASGKWGVVFHAHCIKMGHDWDRFVRNAIM 137

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITWTA 540
           D YGK+G +E AR+LFDEIP+++VADWN++ISG WNWGNE+EA++LFDLMPEKNV+TWTA
Sbjct: 138 DMYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGNEVEARSLFDLMPEKNVVTWTA 197

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPD 720
           MVTGYS+ KDL+NAR +FD+MPERSVVSWNAM+SGYAQNG +E+ + LF+EM+S G+ PD
Sbjct: 198 MVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGVCPD 257

Query: 721 ETTWVAVISSCSS 759
           ETTWV VIS CSS
Sbjct: 258 ETTWVTVISLCSS 270



 Score =  120 bits (300), Expect = 7e-25
 Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 5/217 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAG-I 294
           F+   + +V  +  ML  ++Q G   +V+ LF++M    V PD   +  +I      G  
Sbjct: 215 FDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGVCPDETTWVTVISLCSSHGDA 274

Query: 295 SFHAHLLKM----GLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
           S    L+KM    G+  + +    ++D Y K G++  +RK+FDE                
Sbjct: 275 SLAEGLVKMINDKGVRFNCFAKTALLDMYAKCGNLAMSRKIFDE---------------- 318

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                         L   KN++TW AM++ Y+++ DL +AR  FD +PE++V+SWN++I+
Sbjct: 319 --------------LGTYKNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIA 364

Query: 643 GYAQNGFTEQALSLFSEMLSAGIRPDETTWVAVISSC 753
           GYAQNG ++ A+ LF +M++  + PDE T V+VIS+C
Sbjct: 365 GYAQNGQSKVAIDLFKDMIAKDVLPDEVTMVSVISAC 401



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
 Frame = +1

Query: 115 IFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAG- 291
           +F++  + NV  + +++  ++Q G     + LF  M   DV PD      +I + G  G 
Sbjct: 347 LFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKDMIAKDVLPDEVTMVSVISACGHLGA 406

Query: 292 -------ISF-HAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNS 447
                  ++F   H +K+ +  D    N ++  Y K G+++ A K+F  +  + V  +N+
Sbjct: 407 LEFGNWAVNFLEKHQIKLSISGD----NALIFMYSKCGNMKDAEKVFQSMDSRDVISYNT 462

Query: 448 IISGYWNWGNELEAKTLFDLMPEKNV----ITWTAMVTGYSKMKDLKNARMFFDEMPERS 615
           +I+G+  +GN +EA  L   M ++N+    IT+  ++T  S    L+  +  FD + +  
Sbjct: 463 LITGFAAYGNAVEAVELLWKMKKENIEPDRITYVGVLTACSHGGLLEEGQRIFDSIKDPD 522

Query: 616 VVSWNAMISGYAQNGFTEQALSLFSEM 696
              +  M+    +NG  ++A  L   M
Sbjct: 523 SDHYACMVDLLGRNGKLDEAKCLIGSM 549


>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum lycopersicum]
          Length = 758

 Score =  373 bits (957), Expect = e-101
 Identities = 174/253 (68%), Positives = 211/253 (83%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           KQFHA L Q SL   NYWVA LI LCTR HAP  Y + +F+S  QPNVFVFTN+LKF+SQ
Sbjct: 18  KQFHAQLFQRSLCSDNYWVAQLIKLCTRLHAPSTYVSRVFDSVHQPNVFVFTNILKFYSQ 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
            GA SDVL LFD+MQK +V PDAFVYP+LIK++GK GI FHAH +KMG D D+++ N IM
Sbjct: 78  LGAYSDVLYLFDKMQKSNVAPDAFVYPILIKASGKWGIVFHAHCIKMGHDWDRFVRNAIM 137

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITWTA 540
           D YGK+G +E AR+LFDEIP+++VADWN++ISG WNWG+E+EA++LFDLMPEKNV+TWTA
Sbjct: 138 DVYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGDEVEARSLFDLMPEKNVVTWTA 197

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPD 720
           MVTGYS+ KDL+NAR +FD+MPERSVVSWNAM+SGYAQNG  E+ + LF+EM+S  + PD
Sbjct: 198 MVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEVCPD 257

Query: 721 ETTWVAVISSCSS 759
           ETTWV VIS CSS
Sbjct: 258 ETTWVTVISLCSS 270



 Score =  124 bits (312), Expect = 3e-26
 Identities = 70/217 (32%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAG-I 294
           F+   + +V  +  ML  ++Q G   +V+ LF++M   +V PD   +  +I      G +
Sbjct: 215 FDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEVCPDETTWVTVISLCSSHGDV 274

Query: 295 SFHAHLLKM----GLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
           S    L+KM    G+  + +    ++D Y K G++  ARK+FDE                
Sbjct: 275 SLAEGLVKMINEKGVRLNCFAKTALLDMYAKCGNLAMARKIFDE---------------- 318

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                         L   KN++TW AM++ Y+++ DL +AR  FD++PE++V+SWN++I+
Sbjct: 319 --------------LGTYKNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIA 364

Query: 643 GYAQNGFTEQALSLFSEMLSAGIRPDETTWVAVISSC 753
           GYAQNG ++ A+ LF +M++  + PDE T V+VIS+C
Sbjct: 365 GYAQNGESKVAIDLFKDMIAKDVLPDEVTMVSVISAC 401



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
 Frame = +1

Query: 115 IFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAG- 291
           +F+   + NV  + +++  ++Q G     + LF  M   DV PD      +I + G  G 
Sbjct: 347 LFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKDMIAKDVLPDEVTMVSVISACGHLGA 406

Query: 292 -------ISF-HAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNS 447
                  ++F   H +K+ +       N ++  Y K G+++ A K+F  +  + V  +N+
Sbjct: 407 LEFGNWAVNFLEKHQIKLSISG----YNALIFMYSKCGNMKDAEKVFQSMEARDVISYNT 462

Query: 448 IISGYWNWGNELEAKTLFDLMPEKNV----ITWTAMVTGYSKMKDLKNARMFFDEMPERS 615
           +I+G   +GN +EA  L   M ++N+    IT+  ++T  S    LK  +  FD + +  
Sbjct: 463 LITGVAAYGNAIEAVELLWKMKKENIEPDRITYIGVLTACSHGGLLKEGQRIFDSIKDPD 522

Query: 616 VVSWNAMISGYAQNGFTEQALSLFSEM 696
              +  M+    +NG  ++A  L   M
Sbjct: 523 SDHYACMVDLLGRNGKLDEAKCLIGSM 549


>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  343 bits (880), Expect = 4e-92
 Identities = 161/255 (63%), Positives = 201/255 (78%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA +I NSLHH NYWVALLI+ CTR  APP Y   +FNS L PNVFVFT+ML+F+S 
Sbjct: 18  RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
               + V+ +++QMQ   V+PDAFVYP+LIKSAG  GI FHAH+LK+G   D ++ N ++
Sbjct: 78  LQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGSDAFVRNAVI 137

Query: 361 DFYGKYGHIETARKLFDEIPD--KSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITW 534
           D Y + G I  ARK+FDEIPD  + VADWN+++SGYW W +E +A+ LFD+MPE+NVITW
Sbjct: 138 DMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITW 197

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           TAMVTGY+K+KDL+ AR +FD MPERSVVSWNAM+SGYAQNG  E+AL LF EM++AGI 
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257

Query: 715 PDETTWVAVISSCSS 759
           PDETTWV VIS+CSS
Sbjct: 258 PDETTWVTVISACSS 272



 Score =  113 bits (283), Expect = 6e-23
 Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 47/260 (18%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  ML  ++Q G   + L LFD+M    ++PD   +  +I +    G  
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276

Query: 298 FHA-------HLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
             A       H  ++ L+C  ++   ++D Y K+G +++ARKLF+ +P ++V  WNS+I+
Sbjct: 277 CLAASLVRTLHQKRIQLNC--FVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIA 334

Query: 457 GYWNWGNELEAKTLFDLMPEKNVIT-----------------------W----------- 534
           GY   G    A  LF  M     +T                       W           
Sbjct: 335 GYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIK 394

Query: 535 ------TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEM 696
                  AM+  YS+   +++A+  F EM  R VVS+N +ISG+A +G   +A++L S M
Sbjct: 395 LSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM 454

Query: 697 LSAGIRPDETTWVAVISSCS 756
              GI PD  T++ V+++CS
Sbjct: 455 KEGGIEPDRVTFIGVLTACS 474


>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  341 bits (875), Expect = 1e-91
 Identities = 160/255 (62%), Positives = 199/255 (78%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA +I NSLHH NYWVALLI+ CTR  APP Y   +FNS L PNVFVFT+ML+F+S 
Sbjct: 18  RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
               + V+ +F+ MQ   V+PDAFVYP+LIKSAG  GI FHAH+LK+G   D ++ N ++
Sbjct: 78  LQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDAFVRNAVI 137

Query: 361 DFYGKYGHIETARKLFDEIPD--KSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITW 534
           D Y + G I  ARK+FDEIPD  + VADWN+++SGYW W +E +A+ LFD+MPE+NVITW
Sbjct: 138 DMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITW 197

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           TAMVTGY+K+KDL+ AR +FD MPERSVVSWNAM+SGYAQNG  E+ L LF EM++AGI 
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257

Query: 715 PDETTWVAVISSCSS 759
           PDETTWV VIS+CSS
Sbjct: 258 PDETTWVTVISACSS 272



 Score =  116 bits (290), Expect = 9e-24
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 8/220 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  ML  ++Q G   +VL LFD+M    ++PD   +  +I +    G  
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276

Query: 298 FHA-------HLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
             A       H  ++ L+C  ++   ++D Y K G I  AR++FDE+             
Sbjct: 277 CLAASLVRTLHQKQIQLNC--FVRTALLDMYAKCGSIGAARRIFDEL------------G 322

Query: 457 GYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAM 636
            Y                  +N +TW AM++ Y+++ +L +AR  F+ MP R+VV+WN+M
Sbjct: 323 AY------------------RNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSM 364

Query: 637 ISGYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           I+GYAQNG +  A+ LF EM++A  + PDE T V+VIS+C
Sbjct: 365 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 404


>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Fragaria vesca subsp. vesca]
          Length = 764

 Score =  328 bits (840), Expect = 2e-87
 Identities = 146/256 (57%), Positives = 205/256 (80%), Gaps = 3/256 (1%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HAHL Q S+HHQN+WV+ LI+ CTR  APPPY   IF+S   PN+ VFT+ML+F++ 
Sbjct: 20  RQLHAHLFQKSVHHQNHWVSFLINQCTRLRAPPPYTRLIFDSTPHPNIHVFTSMLQFYAP 79

Query: 181 RGAL--SDVLALFDQMQKL-DVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICN 351
            G +  + V++L+ QMQ+  D+    FVYPLLIKS+G AGI+FHAH++K+GL  D+Y+ N
Sbjct: 80  LGNVYSNQVVSLYQQMQRREDIWLGTFVYPLLIKSSGLAGIAFHAHVVKLGLVSDRYVRN 139

Query: 352 VIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVIT 531
            +M  Y KYG +E ARK+F+E+P++S+ DWN+++SGYW WG+++EA  LFD+MPEK+V++
Sbjct: 140 AVMSVYSKYGPVEHARKVFEEMPERSLVDWNNMVSGYWKWGDKVEACKLFDMMPEKDVVS 199

Query: 532 WTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGI 711
           WTAMVTGY++MKDL+NAR  FD++PE++VVSWNAM+S YAQNG  E+AL LF +M+ +G+
Sbjct: 200 WTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMDSGV 259

Query: 712 RPDETTWVAVISSCSS 759
           +P+ETTW  VIS+CSS
Sbjct: 260 QPNETTWAVVISACSS 275



 Score =  109 bits (273), Expect = 9e-22
 Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + NV  +  ML  ++Q G   + L LFD M    V+P+   + ++I +    G S
Sbjct: 220 FDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMDSGVQPNETTWAVVISACSSCGDS 279

Query: 298 -----FHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
                F   L +  +    +    ++D Y K G IE AR++FDE+             G 
Sbjct: 280 SVVDSFIQKLNQKRMHLSYFGKTAMLDMYAKRGSIERAREVFDEL-------------GV 326

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
           +                 K+  TW AM++ Y+++ DL +AR  FD+M ER V+SWN+MIS
Sbjct: 327 Y-----------------KSSGTWNAMISAYARVGDLTSARELFDKMLERDVISWNSMIS 369

Query: 643 GYAQNGFTEQALSLFSEM-LSAGIRPDETTWVAVISSC 753
           GYAQNG +  A+ LF +M  S   +P+E T  +VIS+C
Sbjct: 370 GYAQNGQSALAIDLFKDMTASNNPKPNEVTMASVISAC 407


>gb|ESW20590.1| hypothetical protein PHAVU_006G221900g [Phaseolus vulgaris]
          Length = 638

 Score =  305 bits (780), Expect = 1e-80
 Identities = 152/255 (59%), Positives = 189/255 (74%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA L+ +S HH+N+WVALL+  CTR  AP  Y   IF+ A  PN  VFT MLK++SQ
Sbjct: 20  RQLHAQLVLHSQHHRNHWVALLLTQCTRLLAPSNYTWHIFHVATYPNAHVFTCMLKYYSQ 79

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
             A +++++ F  +Q  D+KPDA  YP+LIKSAGKA    HAHLLK+G   D  + N IM
Sbjct: 80  ICASTELVSFFKHIQYCDIKPDASFYPILIKSAGKASALLHAHLLKLGHCRDHLVRNAIM 139

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE--KNVITW 534
             Y KYGHIE ARKLFDE+  ++ ADWN IISGYW  GNE EA  LF  M E  +NVITW
Sbjct: 140 VTYAKYGHIEVARKLFDEMLYRTTADWNVIISGYWKCGNEYEASRLFCTMGESKRNVITW 199

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           T MVTG++KM++LK AR++FDEMPERSVVSWNAM+SGYAQ+G  ++ LSLF++MLS+G  
Sbjct: 200 TTMVTGHAKMRNLKAARIYFDEMPERSVVSWNAMLSGYAQSGAAQETLSLFNDMLSSGNE 259

Query: 715 PDETTWVAVISSCSS 759
           PDETTWV V+SSCSS
Sbjct: 260 PDETTWVTVLSSCSS 274



 Score =  110 bits (274), Expect = 7e-22
 Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
 Frame = +1

Query: 106 AACIFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGK 285
           A   F+   + +V  +  ML  ++Q GA  + L+LF+ M     +PD   +  ++ S   
Sbjct: 215 ARIYFDEMPERSVVSWNAMLSGYAQSGAAQETLSLFNDMLSSGNEPDETTWVTVLSSCSS 274

Query: 286 AGI-----SFHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSI 450
            G      S    L KM    + ++   ++D + K G++E A+K+FD++           
Sbjct: 275 LGDPSLAESIVKKLDKMSFRSNYFVKTALLDMHAKCGNLELAQKIFDQL----------- 323

Query: 451 ISGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWN 630
             G +                 K  +TW AM++ Y+++ +L  AR  F+ MPER  VSWN
Sbjct: 324 --GLY-----------------KTSVTWNAMISAYARVGNLSLARDLFNTMPERDTVSWN 364

Query: 631 AMISGYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           +MI+GYAQNG + +A+ LF EM+S+   +PDE T V V S+C
Sbjct: 365 SMIAGYAQNGESLKAIKLFKEMMSSKDSKPDEVTMVTVFSAC 406


>ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Glycine max]
          Length = 640

 Score =  302 bits (773), Expect = 9e-80
 Identities = 152/257 (59%), Positives = 189/257 (73%), Gaps = 4/257 (1%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA L+ +S HH N+WVALL+  CT   AP  Y + IF +A  PNV VFT MLK++SQ
Sbjct: 20  RQLHAQLVLHSQHHHNHWVALLLTQCTHLLAPSNYTSHIFRAATYPNVHVFTCMLKYYSQ 79

Query: 181 RGALSDVL-ALFDQMQKL-DVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNV 354
            GA + V+ +LF  MQ   D+KP    YP+LIKSAGKAG+  HA+LLK+G   D ++ N 
Sbjct: 80  IGATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSAGKAGMLLHAYLLKLGHSHDHHVRNA 139

Query: 355 IMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLM--PEKNVI 528
           IM  Y KYG IE ARKLFDE+PD++ ADWN IISGYW  GNE EA  LF +M   EKNVI
Sbjct: 140 IMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVI 199

Query: 529 TWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAG 708
           TWT MVTG++KM++L+ ARM+FDEMPER V SWNAM+SGYAQ+G  ++ + LF +MLS+G
Sbjct: 200 TWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSG 259

Query: 709 IRPDETTWVAVISSCSS 759
             PDETTWV V+SSCSS
Sbjct: 260 NEPDETTWVTVLSSCSS 276



 Score =  112 bits (281), Expect = 1e-22
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
 Frame = +1

Query: 106 AACIFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGK 285
           A   F+   +  V  +  ML  ++Q GA  + + LFD M     +PD   +  ++ S   
Sbjct: 217 ARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSS 276

Query: 286 AGI-----SFHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSI 450
            G      S    L +M    + ++   ++D + K G++E A+K+F+++           
Sbjct: 277 LGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQL----------- 325

Query: 451 ISGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWN 630
             G +                 KN +TW AM++ Y+++ DL  AR  F++MPER+ VSWN
Sbjct: 326 --GVY-----------------KNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWN 366

Query: 631 AMISGYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           +MI+GYAQNG + +A+ LF EM+S+   +PDE T V+V S+C
Sbjct: 367 SMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSAC 408


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  296 bits (758), Expect = 5e-78
 Identities = 140/252 (55%), Positives = 185/252 (73%), Gaps = 1/252 (0%)
 Frame = +1

Query: 4   QFHAHLIQ-NSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           Q HA LI  NSL  Q+YW + +I  CTR  AP  Y   IF+S   PNVFV  +M K+ S+
Sbjct: 24  QIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSK 83

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
               +DVL L++Q  +  + PDAF +P++IKSAG+ GI F A + K+G   D Y+ NVIM
Sbjct: 84  MDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIM 143

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITWTA 540
           D Y K+  +E+ARK+FD+I  +  +DWN +ISGYW WGN+ EA  LFD+MPE +V++WT 
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPD 720
           M+TG++K+KDL+NAR +FD MPE+SVVSWNAM+SGYAQNGFTE AL LF++ML  G+RP+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263

Query: 721 ETTWVAVISSCS 756
           ETTWV VIS+CS
Sbjct: 264 ETTWVIVISACS 275



 Score =  113 bits (283), Expect = 6e-23
 Identities = 66/220 (30%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAG-KAGI 294
           F+   + +V  +  ML  ++Q G   D L LF+ M +L V+P+   + ++I +   +A  
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280

Query: 295 SFHAHLLKM------GLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
           S    L+K+       L+C  ++   ++D + K   I++AR++F+E              
Sbjct: 281 SLTRSLVKLIDEKRVRLNC--FVKTALLDMHAKCRDIQSARRIFNE-------------- 324

Query: 457 GYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAM 636
                           L  ++N++TW AM++GY+++ D+ +AR  FD MP+R+VVSWN++
Sbjct: 325 ----------------LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368

Query: 637 ISGYAQNGFTEQALSLFSEMLSAG-IRPDETTWVAVISSC 753
           I+GYA NG    A+  F +M+  G  +PDE T ++V+S+C
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408


>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
           lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
           ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score =  295 bits (754), Expect = 1e-77
 Identities = 139/254 (54%), Positives = 187/254 (73%), Gaps = 3/254 (1%)
 Frame = +1

Query: 4   QFHAHLI-QNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           Q HAHLI  NSLH Q+YW + LI  CTR  APP YA  +F+S   PNVF+  +M ++ SQ
Sbjct: 24  QIHAHLIVSNSLHRQSYWASRLISCCTRLRAPPYYARLVFDSVTFPNVFLVNSMFRYFSQ 83

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
               +D L L++Q  +  + PD F +P++IKSAGK G+ F A + KMG+  D Y+ NVIM
Sbjct: 84  MDMANDALRLYEQRSRCGIMPDTFFFPVVIKSAGKFGVLFQALVEKMGIFKDPYVRNVIM 143

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEK--NVITW 534
           D Y K+  +E+ARK+FD+I  +  +DWN +ISGYW +GN+ EA  LFD+MPE   +V++W
Sbjct: 144 DMYAKHESVESARKVFDQITHRKGSDWNVMISGYWKYGNKEEACKLFDMMPEGKIDVVSW 203

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           T M+TG++K+KDL+NAR  FD MPE+SVVSWNAM+SGY+QNGFTE+ L LF++ML  G+R
Sbjct: 204 TVMITGFAKLKDLENARRCFDCMPEKSVVSWNAMLSGYSQNGFTEETLRLFNDMLRLGVR 263

Query: 715 PDETTWVAVISSCS 756
           P+ETTWV VIS+CS
Sbjct: 264 PNETTWVIVISACS 277



 Score =  110 bits (275), Expect = 5e-22
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAG-KAGI 294
           F+   + +V  +  ML  +SQ G   + L LF+ M +L V+P+   + ++I +   +A  
Sbjct: 223 FDCMPEKSVVSWNAMLSGYSQNGFTEETLRLFNDMLRLGVRPNETTWVIVISACSFRADP 282

Query: 295 SFHAHLLKM----GLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
           S    L+K+     +  + ++   ++D + K   I +AR++F+E                
Sbjct: 283 SLAHSLVKLIGEKRIRLNFFVKTALLDMHAKCRDILSARRIFNE---------------- 326

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                         L  +KN++TW AM++GY+++ D+ +AR  FD MP+R+VVSWN++I+
Sbjct: 327 --------------LGTQKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIA 372

Query: 643 GYAQNGFTEQALSLFSEMLSAG-IRPDETTWVAVISSC 753
           GYA NG    A+  F +M+  G  +PDE T ++V+S+C
Sbjct: 373 GYAHNGQPALAIEFFEDMIDYGDSKPDEVTMISVLSAC 410


>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  294 bits (752), Expect = 3e-77
 Identities = 139/253 (54%), Positives = 186/253 (73%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +QFH HL+ NSLH  NYWV+LL+  CTR HA P Y   IF S+  P+  V++ MLK++S+
Sbjct: 18  RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSR 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
            GA + V++LF     L+++P  FVY  LIK AGK+G  FHA++LK+G   D +I N I+
Sbjct: 78  MGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHFIRNAIL 137

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITWTA 540
           D Y K G ++ AR LF+++ ++++ADWNS+ISG W  GNE EA  LF++MP +N+ITWT+
Sbjct: 138 DMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTS 197

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPD 720
           MVTGY+KM DL++AR +FDEMPERSVVSWNAM S YAQ    ++AL+LF +ML  GI PD
Sbjct: 198 MVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPD 257

Query: 721 ETTWVAVISSCSS 759
           +TTWV  ISSCSS
Sbjct: 258 DTTWVVTISSCSS 270



 Score =  108 bits (271), Expect = 2e-21
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  M   ++Q+    + L LF QM +  + PD   + + I S    G  
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274

Query: 298 FHAHLLKMGLD-----CDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
             A  +   +D      + ++   ++D + K+G++E AR +FDE+               
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS------------- 321

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                            ++N +TW  M++ Y+++  L  AR  FD MP+R VVSWN+MI+
Sbjct: 322 -----------------QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIA 364

Query: 643 GYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           GYAQNG +  ++ LF EM+S   I+PDE T  +V+S+C
Sbjct: 365 GYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSAC 402


>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  293 bits (751), Expect = 3e-77
 Identities = 139/253 (54%), Positives = 186/253 (73%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +QFH HL+ NSLH  NYWV+LL+  CTR HA P Y   IF S+  P+  V++ MLK++S+
Sbjct: 18  RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSR 77

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
            GA + V++LF     L+++P  FVY  LIK AGK+G  FHA++LK+G   D +I N I+
Sbjct: 78  MGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFIRNAIL 137

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEKNVITWTA 540
           D Y K G ++ AR LF+++ ++++ADWNS+ISG W  GNE EA  LF++MP +N+ITWT+
Sbjct: 138 DMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTS 197

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPD 720
           MVTGY+KM DL++AR +FDEMPERSVVSWNAM S YAQ    ++AL+LF +ML  GI PD
Sbjct: 198 MVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPD 257

Query: 721 ETTWVAVISSCSS 759
           +TTWV  ISSCSS
Sbjct: 258 DTTWVVTISSCSS 270



 Score =  108 bits (271), Expect = 2e-21
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  M   ++Q+    + L LF QM +  + PD   + + I S    G  
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274

Query: 298 FHAHLLKMGLD-----CDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
             A  +   +D      + ++   ++D + K+G++E AR +FDE+               
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS------------- 321

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                            ++N +TW  M++ Y+++  L  AR  FD MP+R VVSWN+MI+
Sbjct: 322 -----------------QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIA 364

Query: 643 GYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           GYAQNG +  ++ LF EM+S   I+PDE T  +V+S+C
Sbjct: 365 GYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSAC 402


>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499041|gb|AES80244.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  290 bits (741), Expect = 5e-76
 Identities = 146/260 (56%), Positives = 190/260 (73%), Gaps = 7/260 (2%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA L+ +SLHHQN+WV LL+  CTR  AP  Y   IF++A  P+V VFT MLK++SQ
Sbjct: 20  RQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQ 79

Query: 181 RGALSDV-LALFDQMQK-LDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNV 354
            G  + V ++LF  M +  ++KP+   Y +++KSAG   + F AH+LK G D D Y+ N 
Sbjct: 80  IGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNG 139

Query: 355 IMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE----KN 522
           I+  Y KYG IE ARKLFDE+PD++VADWN +ISGYW  GNE EA TLF +M +    +N
Sbjct: 140 ILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRN 199

Query: 523 VITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLS 702
           VITWT M+TG++K  +LK ARM+FD+MPERSVVSWNAM+SGYAQ G  E+ + LF++MLS
Sbjct: 200 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 259

Query: 703 AG-IRPDETTWVAVISSCSS 759
            G ++PDETTWV VISSCSS
Sbjct: 260 PGNVQPDETTWVTVISSCSS 279



 Score =  104 bits (260), Expect = 3e-20
 Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 8/224 (3%)
 Frame = +1

Query: 106 AACIFNSALQPNVFVFTNMLKFHSQRGALSDVLALF-DQMQKLDVKPDAFVYPLLIKSAG 282
           A   F+   + +V  +  ML  ++Q GA  + + LF D +   +V+PD   +  +I S  
Sbjct: 219 ARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCS 278

Query: 283 KAGISFHAHLLKMGLDC------DKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWN 444
             G    +  +   LD       + ++   ++D + K G++E A K+F+++         
Sbjct: 279 SLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL--------- 329

Query: 445 SIISGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVS 624
               G + +               ++ + W AM++ Y+++ DL +AR  FD+MP+R  VS
Sbjct: 330 ----GVYKY---------------RSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVS 370

Query: 625 WNAMISGYAQNGFTEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           WN+MI+GY QNG + +A+ LF EM+S+   +PDE T V+V S+C
Sbjct: 371 WNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSAC 414



 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 50/264 (18%)
 Frame = +1

Query: 115  IFNSALQPNVFV--FTNMLKFHSQRGALSDVLALFDQMQKLD----VKPDAFVYPLLIKS 276
            +FN  L P       T  +   S   +L D       ++KLD     +P+ FV   L+  
Sbjct: 253  LFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDM 312

Query: 277  AGKAGISFHAHLLKMGLDCDKYIC----NVIMDFYGKYGHIETARKLFDEIPDKSVADWN 444
              K G    AH +   L   KY      N ++  Y + G + +AR LFD++P +    WN
Sbjct: 313  HAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWN 372

Query: 445  SIISGYWNWGNELEAKTLFDLM-------PEK---------------------------- 519
            S+I+GY   G  ++A  LF+ M       P++                            
Sbjct: 373  SMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKE 432

Query: 520  -----NVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSL 684
                 ++  + ++++ YS+   +++A + F EM  R +VS+N +ISG+A++G   +++ L
Sbjct: 433  NHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIEL 492

Query: 685  FSEMLSAGIRPDETTWVAVISSCS 756
              +M   GI PD  T++A++++CS
Sbjct: 493  LLKMKEDGIEPDRITYIAILTACS 516


>ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499036|gb|AES80239.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 632

 Score =  289 bits (739), Expect = 8e-76
 Identities = 147/254 (57%), Positives = 187/254 (73%), Gaps = 7/254 (2%)
 Frame = +1

Query: 19  LIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQRGALSD 198
           L+ +SLHHQN+WV LL+  CTRF AP  Y   IF++A  P+V VFT MLK++SQ G  S 
Sbjct: 11  LVHHSLHHQNHWVVLLLTQCTRFLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQ 70

Query: 199 V-LALFDQM-QKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIMDFYG 372
           V ++LF  M Q  D+KP+A  Y +++KSAG   + F AH+LK G D D Y+ N I+  Y 
Sbjct: 71  VFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYA 130

Query: 373 KYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE----KNVITWTA 540
           KYG IE ARKLFDE+PD++VADWN +ISGYW  GNE EA TLF +M +    +NVITWT 
Sbjct: 131 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 190

Query: 541 MVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAG-IRP 717
           M+TG++K  +LK ARM+FD+MPERSVVSWNAM+SGYAQ G  E+ + LF++MLS G ++P
Sbjct: 191 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 250

Query: 718 DETTWVAVISSCSS 759
           DETTW  VISSCSS
Sbjct: 251 DETTWATVISSCSS 264



 Score =  105 bits (261), Expect = 2e-20
 Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 9/225 (4%)
 Frame = +1

Query: 106 AACIFNSALQPNVFVFTNMLKFHSQRGALSDVLALF-DQMQKLDVKPDAFVYPLLIKSAG 282
           A   F+   + +V  +  ML  ++Q GA  + + LF D +   +V+PD   +  +I S  
Sbjct: 204 ARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCS 263

Query: 283 KAGISFHAHLL------KMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWN 444
             G    +  +      K+G   + ++   ++D + K G++E A K+F+++         
Sbjct: 264 SLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL--------- 314

Query: 445 SIISGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVS 624
               G + +               ++ + W AM++ Y+++ DL +A+  FD+MP+R  VS
Sbjct: 315 ----GVYKY---------------RSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVS 355

Query: 625 WNAMISGYAQNGFTEQALSLFSEMLSA--GIRPDETTWVAVISSC 753
           WN+MI+GY QNG + +A+ LF EM+S+    +PDE T V+V S+C
Sbjct: 356 WNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 400



 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 45/222 (20%)
 Frame = +1

Query: 226 KLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYIC----NVIMDFYGKYGHIET 393
           K+  +P+ FV   L+    K G    AH +   L   KY      N ++  Y + G + +
Sbjct: 281 KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPS 340

Query: 394 ARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLM--------PEK---------- 519
           A+ LFD++P +    WNS+I+GY   G   +A  LF+ M        P++          
Sbjct: 341 AKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 400

Query: 520 -----------------------NVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWN 630
                                  ++  + +++  YS+   +++A + F EM  R +VS+N
Sbjct: 401 GHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYN 460

Query: 631 AMISGYAQNGFTEQALSLFSEMLSAGIRPDETTWVAVISSCS 756
            +ISG+A++G   +++ L S+M   GI PD  T++A++++CS
Sbjct: 461 TLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACS 502


>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
           gi|482575903|gb|EOA40090.1| hypothetical protein
           CARUB_v10008784mg [Capsella rubella]
          Length = 543

 Score =  279 bits (714), Expect = 6e-73
 Identities = 132/254 (51%), Positives = 184/254 (72%), Gaps = 3/254 (1%)
 Frame = +1

Query: 4   QFHAHLIQ-NSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           Q HA LI  N L  +++W + LI  CTR  APP Y   +F+S   PNVFV T+M K+ S+
Sbjct: 24  QIHAQLIVFNFLSRKSFWASRLISCCTRLRAPPYYTRLVFDSVAFPNVFVVTSMYKYLSR 83

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
                D L L++Q  +  + PDA+ +P++IKSAG+ G+ F A + K+G   D Y+ NVIM
Sbjct: 84  MDMADDALRLYEQRSRCGILPDAWSFPVVIKSAGEFGVLFQAIVEKLGFFKDPYVRNVIM 143

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEK--NVITW 534
           D Y K+  +++ARK+FD+I  +  +DWN +ISGYW WGN+ EA  LFD+MPE   +V++W
Sbjct: 144 DMYVKHESVQSARKVFDQITHRVGSDWNVMISGYWKWGNKEEACKLFDMMPENDTDVVSW 203

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           T M+TG++K+KDL+NAR +FD MPE+SVVSWNAM+SGYAQNGFTE+ + LF++ML  G++
Sbjct: 204 TVMITGFAKLKDLENARKYFDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDMLRFGVK 263

Query: 715 PDETTWVAVISSCS 756
           P+ETTWV VIS+CS
Sbjct: 264 PNETTWVIVISACS 277



 Score =  114 bits (286), Expect = 3e-23
 Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 8/220 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  ML  ++Q G   + + LF+ M +  VKP+   + ++I +       
Sbjct: 223 FDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDMLRFGVKPNETTWVIVISACSLRADP 282

Query: 298 FHAHLL-------KMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
             AH L       ++ L+C  Y+   ++D + K   I +AR++F+E              
Sbjct: 283 SLAHSLVKLIHEQRVRLNC--YVKTALLDMHAKCRDILSARRIFNE-------------- 326

Query: 457 GYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAM 636
                           L  +KN++TW AM++GY+++ DL +AR  FD MPER++VSWN+M
Sbjct: 327 ----------------LGTQKNLVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSM 370

Query: 637 ISGYAQNGFTEQALSLFSEMLSAG-IRPDETTWVAVISSC 753
           I+GYA NG    A+  F EM+  G  +PDE T ++V+S+C
Sbjct: 371 IAGYAHNGQPALAIEFFEEMIDYGDSKPDEVTMISVLSAC 410


>gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|508779147|gb|EOY26403.1| Pentatricopeptide
           repeat superfamily protein isoform 2 [Theobroma cacao]
          Length = 777

 Score =  269 bits (688), Expect = 7e-70
 Identities = 141/262 (53%), Positives = 179/262 (68%), Gaps = 9/262 (3%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSAL---QPNVFVFTNMLKF 171
           KQ HA LIQNSLHH   WVALLI+ C R  AP  Y   I + +     P+++ F + L++
Sbjct: 28  KQLHAQLIQNSLHHHYSWVALLINACMRLRAPLSYTRTILHYSTATPSPDIYAFISALEY 87

Query: 172 HSQRGALSD--VLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYI 345
           +       +  V +L  Q+     KP A +YP+LIKS+ KAGI FH+HL+K+G   D + 
Sbjct: 88  YYTLPVCKEQEVASLCHQLLASTNKPAA-LYPILIKSSVKAGILFHSHLVKLGHHHDPHT 146

Query: 346 CNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE--K 519
            N +MD Y K+G IE ARKLFDE+P +   DWNS+ISGYW WG E EA  LF+LMPE  +
Sbjct: 147 RNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKR 206

Query: 520 NVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEML 699
           NV+TWTAMVTG + MKDL  AR +FD MP R+VVSWNAM+SGYA+NGF ++AL LF  M+
Sbjct: 207 NVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMI 266

Query: 700 SA--GIRPDETTWVAVISSCSS 759
            A  GI P++ TWVAVISSCSS
Sbjct: 267 KAGDGIEPNQITWVAVISSCSS 288



 Score =  103 bits (256), Expect = 8e-20
 Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLD--VKPDAFVYPLLIKSAGKAG 291
           F+   + NV  +  ML  +++ G   + L LF  M K    ++P+   +  +I S     
Sbjct: 231 FDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLA 290

Query: 292 I-----SFHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
                 S    L K  +  + Y+   ++D + K G++ETA+K+FDE  +           
Sbjct: 291 DPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETAQKIFDEFGE----------- 339

Query: 457 GYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAM 636
                               ++  TW AM++ Y +  +L  AR  FD+MP R+VVSWN+M
Sbjct: 340 -------------------HRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSM 380

Query: 637 ISGYAQNGFTEQALSLFSEML-SAGIRPDETTWVAVISSC 753
           I+G+AQNG    A+ LF EM+ +  ++PDE T V+VIS C
Sbjct: 381 IAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVC 420



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 40/176 (22%)
 Frame = +1

Query: 349 NVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLF-------DL 507
           N ++  Y ++G++  AR+LFD++P ++V  WNS+I+G+   G    A  LF       +L
Sbjct: 347 NAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNL 406

Query: 508 MPEKNVITWTAMVTG---------------------------------YSKMKDLKNARM 588
            P++  +     V G                                 YSK   +K+A  
Sbjct: 407 KPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAER 466

Query: 589 FFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPDETTWVAVISSCS 756
            F EM  R  +S+NA++SG+  +G   +A+ L S M   GI PD  T++ V+++CS
Sbjct: 467 IFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACS 522



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
 Frame = +1

Query: 115 IFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQM-QKLDVKPDAFVYPLLIKSAGKAG 291
           +F+     NV  + +M+   +Q G  +  + LF +M    ++KPD      +I   G+ G
Sbjct: 365 LFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCGQLG 424

Query: 292 ISFHAHLLKMGLDCDKYIC-----------NVIMDFYGKYGHIETARKLFDEIPDKSVAD 438
                  L+MG     +I            N ++  Y K G ++ A ++F E+  +    
Sbjct: 425 A------LEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTIS 478

Query: 439 WNSIISGYWNWGNELEAKTLFDLMPEKNV----ITWTAMVTGYSKMKDLKNARMFFDEMP 606
           +N+++SG+   G  +EA  L   M ++ +    IT+  ++T  S  + LK  R  F+ + 
Sbjct: 479 YNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIK 538

Query: 607 ERSVVSWNAMISGYAQNGFTEQALSLFSEM 696
             +V  +  M+    + G  ++A  L   M
Sbjct: 539 FPAVDHYACMVDLLGRVGELDEAKRLIDHM 568


>gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 833

 Score =  269 bits (688), Expect = 7e-70
 Identities = 141/262 (53%), Positives = 179/262 (68%), Gaps = 9/262 (3%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSAL---QPNVFVFTNMLKF 171
           KQ HA LIQNSLHH   WVALLI+ C R  AP  Y   I + +     P+++ F + L++
Sbjct: 28  KQLHAQLIQNSLHHHYSWVALLINACMRLRAPLSYTRTILHYSTATPSPDIYAFISALEY 87

Query: 172 HSQRGALSD--VLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYI 345
           +       +  V +L  Q+     KP A +YP+LIKS+ KAGI FH+HL+K+G   D + 
Sbjct: 88  YYTLPVCKEQEVASLCHQLLASTNKPAA-LYPILIKSSVKAGILFHSHLVKLGHHHDPHT 146

Query: 346 CNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE--K 519
            N +MD Y K+G IE ARKLFDE+P +   DWNS+ISGYW WG E EA  LF+LMPE  +
Sbjct: 147 RNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKR 206

Query: 520 NVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEML 699
           NV+TWTAMVTG + MKDL  AR +FD MP R+VVSWNAM+SGYA+NGF ++AL LF  M+
Sbjct: 207 NVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMI 266

Query: 700 SA--GIRPDETTWVAVISSCSS 759
            A  GI P++ TWVAVISSCSS
Sbjct: 267 KAGDGIEPNQITWVAVISSCSS 288



 Score =  103 bits (256), Expect = 8e-20
 Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLD--VKPDAFVYPLLIKSAGKAG 291
           F+   + NV  +  ML  +++ G   + L LF  M K    ++P+   +  +I S     
Sbjct: 231 FDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLA 290

Query: 292 I-----SFHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIIS 456
                 S    L K  +  + Y+   ++D + K G++ETA+K+FDE  +           
Sbjct: 291 DPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETAQKIFDEFGE----------- 339

Query: 457 GYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAM 636
                               ++  TW AM++ Y +  +L  AR  FD+MP R+VVSWN+M
Sbjct: 340 -------------------HRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSM 380

Query: 637 ISGYAQNGFTEQALSLFSEML-SAGIRPDETTWVAVISSC 753
           I+G+AQNG    A+ LF EM+ +  ++PDE T V+VIS C
Sbjct: 381 IAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVC 420



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 40/176 (22%)
 Frame = +1

Query: 349 NVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLF-------DL 507
           N ++  Y ++G++  AR+LFD++P ++V  WNS+I+G+   G    A  LF       +L
Sbjct: 347 NAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNL 406

Query: 508 MPEKNVITWTAMVTG---------------------------------YSKMKDLKNARM 588
            P++  +     V G                                 YSK   +K+A  
Sbjct: 407 KPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAER 466

Query: 589 FFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIRPDETTWVAVISSCS 756
            F EM  R  +S+NA++SG+  +G   +A+ L S M   GI PD  T++ V+++CS
Sbjct: 467 IFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACS 522



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
 Frame = +1

Query: 115 IFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQM-QKLDVKPDAFVYPLLIKSAGKAG 291
           +F+     NV  + +M+   +Q G  +  + LF +M    ++KPD      +I   G+ G
Sbjct: 365 LFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCGQLG 424

Query: 292 ISFHAHLLKMGLDCDKYIC-----------NVIMDFYGKYGHIETARKLFDEIPDKSVAD 438
                  L+MG     +I            N ++  Y K G ++ A ++F E+  +    
Sbjct: 425 A------LEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTIS 478

Query: 439 WNSIISGYWNWGNELEAKTLFDLMPEKNV----ITWTAMVTGYSKMKDLKNARMFFDEMP 606
           +N+++SG+   G  +EA  L   M ++ +    IT+  ++T  S  + LK  R  F+ + 
Sbjct: 479 YNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIK 538

Query: 607 ERSVVSWNAMISGYAQNGFTEQALSLFSEM 696
             +V  +  M+    + G  ++A  L   M
Sbjct: 539 FPAVDHYACMVDLLGRVGELDEAKRLIDHM 568


>ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutrema salsugineum]
           gi|557094778|gb|ESQ35360.1| hypothetical protein
           EUTSA_v10009648mg [Eutrema salsugineum]
          Length = 490

 Score =  265 bits (677), Expect = 1e-68
 Identities = 128/255 (50%), Positives = 174/255 (68%), Gaps = 3/255 (1%)
 Frame = +1

Query: 4   QFHAHLIQ-NSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           Q  A LI  NSLH Q+YW + LI  CTR  APP YA  +F S   PNVFV  +M ++ SQ
Sbjct: 24  QIQAQLIVFNSLHRQSYWASRLISSCTRLRAPPYYARLVFGSVAFPNVFVVNSMFRYFSQ 83

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
               +D L L+ Q  +  + PDAF +P++IKSAGK G+ FHA + K+G   D Y      
Sbjct: 84  MDMANDALRLYKQRSRCGIMPDAFSFPVVIKSAGKFGVLFHALVEKLGYFGDPY------ 137

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEK--NVITW 534
                   +E+ARK+FD+I  +  +DWN +ISGYW WG + EA   FD+MPE   + ++W
Sbjct: 138 -------SVESARKVFDQITRRMCSDWNVMISGYWKWGKKEEACNFFDIMPENKTDAVSW 190

Query: 535 TAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSAGIR 714
           T M+TG++K+KDLK+AR +FD+M E+SVV+WNAM+SGYAQNGFTE+ L LF++M+  G++
Sbjct: 191 TVMITGFAKLKDLKSARWYFDQMQEKSVVTWNAMLSGYAQNGFTEETLRLFNDMMRLGVK 250

Query: 715 PDETTWVAVISSCSS 759
           P+ETTWV VIS+CSS
Sbjct: 251 PNETTWVIVISACSS 265



 Score =  100 bits (249), Expect = 5e-19
 Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGIS 297
           F+   + +V  +  ML  ++Q G   + L LF+ M +L VKP+   + ++I +    G  
Sbjct: 210 FDQMQEKSVVTWNAMLSGYAQNGFTEETLRLFNDMMRLGVKPNETTWVIVISACSSRGDP 269

Query: 298 FHAHLL-------KMGLDCDKYICNVIMDFYGKYGHIETARKLFDEI-PDKSVADWNSII 453
             AH L       ++ L+C  ++   ++D + K   I +AR++F+E+   +++  WN++I
Sbjct: 270 SLAHSLVKLIDEQRVRLNC--FLKTALLDMHAKCRDIVSARRIFNELGTQRNLVTWNAMI 327

Query: 454 SGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNA 633
           SGY   G+   A+ LFD MPEKNV++W +M                              
Sbjct: 328 SGYTRIGDLSLARQLFDTMPEKNVVSWNSM------------------------------ 357

Query: 634 MISGYAQNGFTEQALSLFSEMLSAG-IRPDETTWVAVISSC 753
            I+G+A NG    A+  F EM+ +G  +PDE T +  +S+C
Sbjct: 358 -IAGFAHNGQPALAIEFFKEMIDSGDSKPDEVTMIGALSAC 397


>gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
          Length = 692

 Score =  256 bits (654), Expect = 6e-66
 Identities = 117/202 (57%), Positives = 160/202 (79%), Gaps = 2/202 (0%)
 Frame = +1

Query: 160 MLKFHSQRGA--LSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDC 333
           MLK++S  G+   + V++L+ ++Q  D++   FVYP+LIKSAG  GI FHAH+LK+GL  
Sbjct: 1   MLKYYSNLGSAHFNQVVSLYQKLQCCDLRIGTFVYPVLIKSAGSKGIEFHAHVLKLGLAS 60

Query: 334 DKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMP 513
           D YI N IM  Y KYG +E AR +F E+ ++++ADWN++I GYWNWGN+ EA  LFD+MP
Sbjct: 61  DPYIRNAIMGLYAKYGPVENARDVFAEMHERTLADWNNMIFGYWNWGNKAEACRLFDMMP 120

Query: 514 EKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSE 693
           E+NV+TWTAMVTGY++MKDL+NAR +FDE+PE++VVSWNAM+S YAQN F E+AL LF +
Sbjct: 121 ERNVVTWTAMVTGYARMKDLENARRYFDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDD 180

Query: 694 MLSAGIRPDETTWVAVISSCSS 759
           M+++  +P+ETTW  VIS+CSS
Sbjct: 181 MMNSRDQPNETTWAIVISACSS 202



 Score =  112 bits (280), Expect = 1e-22
 Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
 Frame = +1

Query: 118 FNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGI- 294
           F+   + NV  +  ML  ++Q     + L LFD M     +P+   + ++I +    G  
Sbjct: 147 FDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDDMMNSRDQPNETTWAIVISACSSCGDC 206

Query: 295 ----SFHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGY 462
               SF   L +  +    +    ++D Y K G ++ AR++FDE                
Sbjct: 207 SLADSFVQKLNQKRIHLSYFAKTALLDMYAKRGSLQAARQVFDE---------------- 250

Query: 463 WNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMIS 642
                         L   +N +TW AM++ Y+++ DL +AR  FD+M ER VV+WN+MIS
Sbjct: 251 --------------LGVSRNTVTWNAMISAYTRVGDLASARELFDKMLERDVVTWNSMIS 296

Query: 643 GYAQNGFTEQALSLFSEMLSAG--IRPDETTWVAVISSC 753
           GYAQNG +  A+ LF +M++A    +PDE T V+VIS+C
Sbjct: 297 GYAQNGQSALAIDLFKDMITAADDPKPDEVTMVSVISAC 335


>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  253 bits (646), Expect = 5e-65
 Identities = 119/200 (59%), Positives = 158/200 (79%)
 Frame = +1

Query: 160 MLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDK 339
           MLK++SQ G   ++L+ F ++    +K DA +YPL+IKS+GK GI FHAH+LK+G   D 
Sbjct: 1   MLKYYSQLGFQDELLSFFKRIY-CRIKLDASLYPLVIKSSGKDGILFHAHILKLGHQSDP 59

Query: 340 YICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPEK 519
           YI NVI+D Y K+  IE ARKLFDE+ ++S+ADWNS+I GYW  GNE EA +LF + PE+
Sbjct: 60  YIRNVILDMYAKHSLIENARKLFDEMTERSLADWNSMICGYWKCGNETEACSLFSMTPER 119

Query: 520 NVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEML 699
           NVITWTAMVTG+SK+K+L +AR +FD+MP +++VSWNA+ISGYAQNGF E+AL LF+ M+
Sbjct: 120 NVITWTAMVTGFSKIKELDSARKYFDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMI 179

Query: 700 SAGIRPDETTWVAVISSCSS 759
             G++P+ETTW  VISSCSS
Sbjct: 180 RLGVQPNETTWATVISSCSS 199



 Score =  114 bits (285), Expect = 4e-23
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
 Frame = +1

Query: 139 NVFVFTNMLKFHSQRGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGI-----SFH 303
           N+  +  ++  ++Q G + + L LF+ M +L V+P+   +  +I S    G      SF 
Sbjct: 151 NIVSWNAIISGYAQNGFVEEALKLFNHMIRLGVQPNETTWATVISSCSSCGDPCRAESFV 210

Query: 304 AHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNEL 483
             L K  +  + ++   ++D   K G++E AR +F+E                       
Sbjct: 211 KLLDKRKIKMNYFVKTALLDMNAKCGNLEAARGIFNE----------------------- 247

Query: 484 EAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGF 663
                  L   +N  TW AM++ Y+++ DL +AR  FD+MPER  VSWN MISGYAQNG 
Sbjct: 248 -------LGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQ 300

Query: 664 TEQALSLFSEMLSA-GIRPDETTWVAVISSC 753
           +  A+ LF EM+ A   +PDE T V++IS+C
Sbjct: 301 SAMAIELFKEMIDAKDSQPDEVTMVSIISAC 331


>ref|XP_004485903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cicer arietinum]
          Length = 613

 Score =  252 bits (643), Expect = 1e-64
 Identities = 129/258 (50%), Positives = 168/258 (65%), Gaps = 5/258 (1%)
 Frame = +1

Query: 1   KQFHAHLIQNSLHHQNYWVALLIHLCTRFHAPPPYAACIFNSALQPNVFVFTNMLKFHSQ 180
           +Q HA L+ +SLHHQN+WV+ L+  CTR  AP  Y + IF+    P+  VFT+MLK++ Q
Sbjct: 20  RQLHAQLLHHSLHHQNHWVSFLLTQCTRLLAPSTYTSHIFHLTTHPDARVFTSMLKYYCQ 79

Query: 181 RGALSDVLALFDQMQKLDVKPDAFVYPLLIKSAGKAGISFHAHLLKMGLDCDKYICNVIM 360
            G    +                                F +H+LK+G D D Y+ NVI+
Sbjct: 80  IGKNETMF-------------------------------FLSHVLKLGHDRDHYVRNVIL 108

Query: 361 DFYGKYGHIETARKLFDEIPDKSVADWNSIISGYWNWGNELEAKTLFDLMPE----KNVI 528
               KYG IE ARKLFDE+PD++VADWN +ISGYW WG+E EA  LF++M E    +NVI
Sbjct: 109 GIRAKYGPIELARKLFDEMPDRTVADWNVMISGYWKWGDEEEASRLFNVMGEEEIRRNVI 168

Query: 529 TWTAMVTGYSKMKDLKNARMFFDEMPERSVVSWNAMISGYAQNGFTEQALSLFSEMLSA- 705
           TWT MVTGY+K ++LK ARM+FD+MPE+SVVSWNAM+SGYAQ G  ++A+ LF  MLS+ 
Sbjct: 169 TWTTMVTGYAKKRNLKTARMYFDKMPEKSVVSWNAMLSGYAQGGEPQEAVKLFDNMLSSQ 228

Query: 706 GIRPDETTWVAVISSCSS 759
            + P+ETTWV VISSCSS
Sbjct: 229 NVEPNETTWVTVISSCSS 246



 Score =  113 bits (282), Expect = 8e-23
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 8/224 (3%)
 Frame = +1

Query: 106 AACIFNSALQPNVFVFTNMLKFHSQRGALSDVLALFDQM-QKLDVKPDAFVYPLLIKSAG 282
           A   F+   + +V  +  ML  ++Q G   + + LFD M    +V+P+   +  +I S  
Sbjct: 186 ARMYFDKMPEKSVVSWNAMLSGYAQGGEPQEAVKLFDNMLSSQNVEPNETTWVTVISSCS 245

Query: 283 KAGIS------FHAHLLKMGLDCDKYICNVIMDFYGKYGHIETARKLFDEIPDKSVADWN 444
             G        F     +MG   + ++   ++D Y K G++E A K+FD++         
Sbjct: 246 SLGDPCLLESIFRKLDHRMGFRSNYFVMTALLDMYAKCGNLEAAHKIFDQL--------- 296

Query: 445 SIISGYWNWGNELEAKTLFDLMPEKNVITWTAMVTGYSKMKDLKNARMFFDEMPERSVVS 624
               G + +               K+ + W AM++GYS++ +L  AR FFD+MP+R +VS
Sbjct: 297 ----GVYKF---------------KSSVPWNAMISGYSRVGNLSLARHFFDKMPQRDIVS 337

Query: 625 WNAMISGYAQNGFTEQALSLFSEMLS-AGIRPDETTWVAVISSC 753
           WN+MI+GY QNG +  A+ LF EM+S    +PDE T V+V S+C
Sbjct: 338 WNSMIAGYTQNGESLMAIELFEEMISNEDSKPDEVTMVSVFSAC 381