BLASTX nr result

ID: Catharanthus22_contig00041351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00041351
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279250.2| PREDICTED: uncharacterized protein LOC100243...    57   3e-06
emb|CBI19921.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_003527653.1| PREDICTED: leucine-rich repeat extensin-like...    57   4e-06
ref|XP_006577960.1| PREDICTED: la-related protein-like [Glycine ...    56   9e-06
ref|XP_002510581.1| lupus la ribonucleoprotein, putative [Ricinu...    56   9e-06

>ref|XP_002279250.2| PREDICTED: uncharacterized protein LOC100243746 [Vitis vinifera]
          Length = 565

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/47 (68%), Positives = 34/47 (72%)
 Frame = -3

Query: 609 NLIKDDYLRSNMDDQGLVPISLIASFPRVSLLW*FMNCTYLAIDSLR 469
           NLIKDDYLRS MDDQG VPI+LIA FPRV  L    N   L +DSLR
Sbjct: 413 NLIKDDYLRSYMDDQGWVPITLIAGFPRVQSL---TNSIPLILDSLR 456


>emb|CBI19921.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/47 (68%), Positives = 34/47 (72%)
 Frame = -3

Query: 609 NLIKDDYLRSNMDDQGLVPISLIASFPRVSLLW*FMNCTYLAIDSLR 469
           NLIKDDYLRS MDDQG VPI+LIA FPRV  L    N   L +DSLR
Sbjct: 407 NLIKDDYLRSYMDDQGWVPITLIAGFPRVQSL---TNSIPLILDSLR 450


>ref|XP_003527653.1| PREDICTED: leucine-rich repeat extensin-like protein 5-like
           [Glycine max]
          Length = 511

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = -3

Query: 609 NLIKDDYLRSNMDDQGLVPISLIASFPRVSLLW*FMNCTYLAIDSLR 469
           NL+KD+YLRSNMD+QG VPISLIASFPRV  L    +   L +DSLR
Sbjct: 380 NLVKDEYLRSNMDEQGWVPISLIASFPRVRSL---TSNIKLILDSLR 423


>ref|XP_006577960.1| PREDICTED: la-related protein-like [Glycine max]
          Length = 520

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -3

Query: 609 NLIKDDYLRSNMDDQGLVPISLIASFPRVSLLW*FMNCTYLAIDSLR 469
           NL+KD+YLRSNMD+QG VPI+LIASFPRV  L    +   L +DSLR
Sbjct: 387 NLVKDEYLRSNMDEQGWVPITLIASFPRVRSL---TSNIKLILDSLR 430


>ref|XP_002510581.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223551282|gb|EEF52768.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 449

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 609 NLIKDDYLRSNMDDQGLVPISLIASFPRVSLLW*FMNCTYLAIDSLR 469
           NL+KDD+L+SNMDDQG VPI+LIASF RV  +    N  +L +DSLR
Sbjct: 307 NLVKDDFLKSNMDDQGWVPITLIASFNRVRKM---TNDIHLVLDSLR 350


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