BLASTX nr result
ID: Catharanthus22_contig00041272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00041272
(397 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS68969.1| hypothetical protein M569_05799, partial [Genlise... 64 2e-08
gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent R... 62 1e-07
ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor... 61 2e-07
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 61 2e-07
gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma ... 61 2e-07
gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma ... 61 2e-07
emb|CBI15151.3| unnamed protein product [Vitis vinifera] 61 2e-07
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 61 2e-07
gb|ESW10252.1| hypothetical protein PHAVU_009G193400g [Phaseolus... 60 2e-07
ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor... 60 3e-07
ref|XP_006440705.1| hypothetical protein CICLE_v10024265mg, part... 60 3e-07
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 60 4e-07
ref|XP_004499484.1| PREDICTED: putative pre-mRNA-splicing factor... 59 7e-07
ref|XP_004287510.1| PREDICTED: putative pre-mRNA-splicing factor... 59 9e-07
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu... 57 3e-06
gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus pe... 57 3e-06
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor... 56 4e-06
ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor... 56 6e-06
ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor... 56 6e-06
gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus pe... 56 6e-06
>gb|EPS68969.1| hypothetical protein M569_05799, partial [Genlisea aurea]
Length = 259
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
SDL+ WVS+KL+SLLGYS+P +VQYVI+LSK+ASS EI+ L + G
Sbjct: 2 SDLKTWVSDKLMSLLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLG 48
>gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Morus notabilis]
Length = 1043
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
M SD L+ WVS+KL+SLLGYS+ LVQYVI LSKQA+S +++ LEE G
Sbjct: 1 MASDGNLKTWVSDKLMSLLGYSQSTLVQYVIGLSKQAASPADVVSKLEEFG 51
>ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Glycine max]
Length = 1046
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
MGSD L+ WVS+KL+SLLGYS+P +VQY+I LSKQA+S +++ L E G
Sbjct: 1 MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFG 51
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 247 MGSD-LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
MG D L+ WVS+KL+SLLGYS+ +VQY+I +SKQASSS +++ LE G
Sbjct: 1 MGDDNLKTWVSDKLMSLLGYSQATVVQYIIGISKQASSSADVLSKLEAFG 50
>gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 1055
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL+SLL YS+P LVQY+I L+KQA+S +++ LEE G
Sbjct: 5 SNLKTWVSDKLMSLLDYSQPTLVQYIIGLAKQAASPTDLLGQLEECG 51
>gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1054
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL+SLL YS+P LVQY+I L+KQA+S +++ LEE G
Sbjct: 5 SNLKTWVSDKLMSLLDYSQPTLVQYIIGLAKQAASPTDLLGQLEECG 51
>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL+SLLGYS+P LVQYV+ L+KQASS +++ L E G
Sbjct: 5 SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFG 51
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL+SLLGYS+P LVQYV+ L+KQASS +++ L E G
Sbjct: 5 SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFG 51
>gb|ESW10252.1| hypothetical protein PHAVU_009G193400g [Phaseolus vulgaris]
Length = 1051
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
MG D L+ WVSEKL+SLLGYS+P +VQY+I LSKQA+S +++ L E G
Sbjct: 1 MGGDDSLKTWVSEKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFG 51
>ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Citrus sinensis]
Length = 1051
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
MGSD L+ WVS+KL+SL+G+S+P +VQYVI LSKQA S+ ++ LEE G
Sbjct: 1 MGSDHNLKTWVSDKLMSLVGFSQPTVVQYVIGLSKQAVSAADVQTKLEEFG 51
>ref|XP_006440705.1| hypothetical protein CICLE_v10024265mg, partial [Citrus clementina]
gi|557542967|gb|ESR53945.1| hypothetical protein
CICLE_v10024265mg, partial [Citrus clementina]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
MGSD L+ WVS+KL+SL+G+S+P +VQYVI LSKQA S+ ++ LEE G
Sbjct: 1 MGSDHNLKTWVSDKLMSLVGFSQPTVVQYVIGLSKQAVSAADVQTKLEEFG 51
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL++LLGYS+P +VQY+I +SKQA S E++ L ++G
Sbjct: 5 SNLKTWVSDKLMTLLGYSQPAVVQYIIGISKQAKSPAEVVVKLVDSG 51
>ref|XP_004499484.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Cicer arietinum]
Length = 153
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
M SD L+ WVS+KL+SLLGYS+P LVQY+I LSKQA+S +++ L E G
Sbjct: 1 MASDDNLKTWVSDKLMSLLGYSQPTLVQYMIGLSKQATSPADLMGKLVEFG 51
>ref|XP_004287510.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1051
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL++LLGYS+PV+VQYVI L+K+A+S V ++ L E G
Sbjct: 5 SNLKTWVSDKLIALLGYSKPVVVQYVIGLTKKANSPVGLVDKLVEFG 51
>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 756
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
SDL+ WVS+KL+S+LGYS+ +VQY+I +SKQA+S ++ L E G
Sbjct: 4 SDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFG 50
>gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus persica]
Length = 1026
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
S+L+ WVS+KL++ LGYS+P +VQY+I L+KQA S +++ L E G
Sbjct: 5 SNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFG 51
>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Cucumis sativus]
Length = 1055
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGL 381
+DL+ WVS++L+SLLG+S+P +VQY+I LSKQA+S +++ L
Sbjct: 5 NDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKL 47
>ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Oryza brachyantha]
Length = 1052
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
M SD LR+WVS+KL+SLLGYS+ V+VQYVI L+K+ SS+ +++ L E G
Sbjct: 1 MASDGQLRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFG 51
>ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Setaria italica]
Length = 1051
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 247 MGSD--LRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEEAG 393
M SD LR W+S+KL+SLLGYS+ V+VQYVI L+K+ SS+ +++ L E G
Sbjct: 1 MASDGQLREWISDKLMSLLGYSKSVIVQYVIRLAKECSSTSDLVGKLVEFG 51
>gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +1
Query: 253 SDLRNWVSEKLLSLLGYSEPVLVQYVISLSKQASSSVEIIKGLEE 387
S+L WVS+KL++LLGYS+P +VQY+I L+KQA S +++ L E
Sbjct: 5 SNLNTWVSDKLMTLLGYSQPTVVQYIIGLTKQAKSPADVVGKLVE 49