BLASTX nr result

ID: Catharanthus22_contig00040960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040960
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   1e-06

>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/120 (31%), Positives = 59/120 (49%)
 Frame = +3

Query: 6   PRLRVKHEFSNNSDHIPLVVVLQNNLRPSWRKRKGVKPFRFETLWLHNEECKEIIQSNWS 185
           P LRV       SDH PL+V   +N    W    G KPFRF+  WL + EC +I+++ W 
Sbjct: 208 PNLRVSLLQRGLSDHCPLLV---HNKELDW----GPKPFRFQNCWLSDPECLKIVKAVWQ 260

Query: 186 SQFGDGFVASR*QLQEIA*ALQGCSKIKYDNMEEKSKKLKVEVQRLQTIRVEPSFDLIEL 365
                  +    +L+E+   L+  +  ++ N++ K KK + E+Q L +I      D  EL
Sbjct: 261 DAEALHTIG---KLKEVKKRLKSWNLTEFGNIDSKIKKFESEIQHLDSINNTRDLDTQEL 317


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