BLASTX nr result
ID: Catharanthus22_contig00040922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00040922
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363374.1| PREDICTED: DNA repair protein RAD51 homolog ... 100 3e-19
emb|CBI16200.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_006590288.1| PREDICTED: uncharacterized protein LOC100780... 97 2e-18
ref|XP_006590287.1| PREDICTED: uncharacterized protein LOC100780... 97 2e-18
gb|ESW04110.1| hypothetical protein PHAVU_011G067900g [Phaseolus... 97 2e-18
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin... 97 2e-18
ref|XP_004505899.1| PREDICTED: DNA repair protein RAD51 homolog ... 97 2e-18
ref|XP_004505898.1| PREDICTED: DNA repair protein RAD51 homolog ... 97 2e-18
gb|EXC35072.1| DNA repair protein RAD51-4-like protein [Morus no... 96 5e-18
ref|XP_004294616.1| PREDICTED: DNA repair protein RAD51 homolog ... 96 6e-18
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ... 95 8e-18
ref|XP_002531104.1| DNA repair and recombination protein radB, p... 95 8e-18
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein... 94 2e-17
gb|EMJ07684.1| hypothetical protein PRUPE_ppa019062mg, partial [... 94 2e-17
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera] 93 4e-17
ref|XP_004251314.1| PREDICTED: DNA repair protein RAD51 homolog ... 92 7e-17
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ... 90 3e-16
gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair prot... 87 2e-15
ref|NP_172254.2| DNA repair protein RAD51 homolog 4 [Arabidopsis... 87 2e-15
ref|NP_001077479.1| DNA repair protein RAD51 homolog 4 [Arabidop... 87 2e-15
>ref|XP_006363374.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Solanum
tuberosum]
Length = 314
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/95 (51%), Positives = 68/95 (71%)
Frame = -2
Query: 287 SAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITP 108
SA +K LQQV+ N++C SVFDIF Q +++ML++DSISSLI P
Sbjct: 163 SAYEVDKSLQQVMKNIVCFSVFDIFTLFEVLHQLKNNLRSQKDEHIRMLIIDSISSLIAP 222
Query: 107 VLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+LGG+ AHGHALM +AGFLLK+LAH+H++++L+TN
Sbjct: 223 ILGGS-AHGHALMLSAGFLLKRLAHEHDISILVTN 256
>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Frame = -2
Query: 299 DHAYSAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXN--YQTGHN-LKMLVVDS 129
D + V N IL++V+ ++C SVFDIF QTG + +++L+VDS
Sbjct: 214 DTIFKEVKQN-ILEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDS 272
Query: 128 ISSLITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
ISSLITP+LGG+G+HG ALM +AGFLLKKLAH+HNLAV++TN
Sbjct: 273 ISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVVVTN 314
>ref|XP_006590288.1| PREDICTED: uncharacterized protein LOC100780427 isoform X2 [Glycine
max]
Length = 319
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = -2
Query: 266 ILQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITPVLGG 96
+L++VLD +IC SVFD+ F ++ ++++L+VDSISSLITP+LGG
Sbjct: 166 MLKKVLDRIICYSVFDVYQMFDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGG 225
Query: 95 NGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+G GHALM +AGFLLKKLAH+HN+AVL+TN
Sbjct: 226 SGPQGHALMISAGFLLKKLAHEHNIAVLVTN 256
>ref|XP_006590287.1| PREDICTED: uncharacterized protein LOC100780427 isoform X1 [Glycine
max]
Length = 321
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = -2
Query: 266 ILQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITPVLGG 96
+L++VLD +IC SVFD+ F ++ ++++L+VDSISSLITP+LGG
Sbjct: 172 MLKKVLDRIICYSVFDVYQMFDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGG 231
Query: 95 NGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+G GHALM +AGFLLKKLAH+HN+AVL+TN
Sbjct: 232 SGPQGHALMISAGFLLKKLAHEHNIAVLVTN 262
>gb|ESW04110.1| hypothetical protein PHAVU_011G067900g [Phaseolus vulgaris]
Length = 318
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/101 (49%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
Frame = -2
Query: 287 SAVNDNKI---LQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSI 126
S+ +DN+ L++VLD +IC SVFDI F ++ ++++L+VDSI
Sbjct: 159 SSASDNQAAHKLKEVLDRIICYSVFDIYQMFDVLHQLKTNLRSEIVKSNQHVRLLIVDSI 218
Query: 125 SSLITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
SSL+TP+LGG+G GHALM +AGFLLKKL H+HN+AVL+TN
Sbjct: 219 SSLVTPILGGSGPQGHALMISAGFLLKKLGHEHNIAVLVTN 259
>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
gi|255635337|gb|ACU18022.1| unknown [Glycine max]
Length = 325
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = -2
Query: 266 ILQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITPVLGG 96
+L++VLD +IC SVFD+ F ++ ++++L+VDSISSLITP+LGG
Sbjct: 172 MLKKVLDRIICYSVFDVYQMFDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGG 231
Query: 95 NGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+G GHALM +AGFLLKKLAH+HN+AVL+TN
Sbjct: 232 SGPQGHALMISAGFLLKKLAHEHNIAVLVTN 262
>ref|XP_004505899.1| PREDICTED: DNA repair protein RAD51 homolog 4-like isoform X2
[Cicer arietinum]
Length = 318
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Frame = -2
Query: 275 DNKILQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITPV 105
D + LQ+VLD +IC VFD+ F ++ ++++L+VDSISSLITP+
Sbjct: 165 DRRSLQKVLDRIICYPVFDVYEMFDMLHQLKINLTSEIVKSDRHVQLLIVDSISSLITPI 224
Query: 104 LGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
L GNG GHALM +AGFLLKKLAH+HN+AVL+TN
Sbjct: 225 LRGNGPQGHALMISAGFLLKKLAHEHNIAVLVTN 258
>ref|XP_004505898.1| PREDICTED: DNA repair protein RAD51 homolog 4-like isoform X1
[Cicer arietinum]
Length = 322
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Frame = -2
Query: 275 DNKILQQVLDNLICRSVFDI---FKXXXXXXXXXXXXNYQTGHNLKMLVVDSISSLITPV 105
D + LQ+VLD +IC VFD+ F ++ ++++L+VDSISSLITP+
Sbjct: 169 DRRSLQKVLDRIICYPVFDVYEMFDMLHQLKINLTSEIVKSDRHVQLLIVDSISSLITPI 228
Query: 104 LGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
L GNG GHALM +AGFLLKKLAH+HN+AVL+TN
Sbjct: 229 LRGNGPQGHALMISAGFLLKKLAHEHNIAVLVTN 262
>gb|EXC35072.1| DNA repair protein RAD51-4-like protein [Morus notabilis]
Length = 359
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = -2
Query: 272 NKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTG-HNLKMLVVDSISSLITPVLGG 96
+ LQ V+ N++C SVFDIF Q G +++L+VDSISSLITP+LGG
Sbjct: 163 HNFLQNVMKNILCHSVFDIFTMFDILHQLELDLRSQNGPRRVRLLIVDSISSLITPILGG 222
Query: 95 NGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+G GH+LM +AG LLKKLAH HNL VL+TN
Sbjct: 223 SGLQGHSLMVSAGCLLKKLAHQHNLVVLVTN 253
>ref|XP_004294616.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Fragaria vesca
subsp. vesca]
Length = 316
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = -2
Query: 302 ADHAYSAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHNLKMLVVDSIS 123
++H +S Q+ ++N++C SVFDIF Q G +++L+VDSIS
Sbjct: 161 SNHTFSQAGQRNF-QKAMNNILCHSVFDIFTMFNVLHRLEFSLKSQKGGQVQLLIVDSIS 219
Query: 122 SLITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
SLITP+LG + G ALM +AG+LLKKLAH+HN+AVL+TN
Sbjct: 220 SLITPILGNTSSQGRALMTSAGYLLKKLAHEHNIAVLVTN 259
>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
Length = 326
Score = 95.1 bits (235), Expect = 8e-18
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Frame = -2
Query: 296 HAYSAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXN--YQTGHN-LKMLVVDSI 126
H + + D + ++ ++C SVFDIF QTG + +++L+VDSI
Sbjct: 155 HFINQIPDTIFKEVIMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSI 214
Query: 125 SSLITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
SSLITP+LGG+G+HG ALM +AGFLLKKLAH+HNLAV++TN
Sbjct: 215 SSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVVVTN 255
>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
communis] gi|223529300|gb|EEF31269.1| DNA repair and
recombination protein radB, putative [Ricinus communis]
Length = 315
Score = 95.1 bits (235), Expect = 8e-18
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Frame = -2
Query: 281 VNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHN----LKMLVVDSISSLI 114
++ + + Q V+ N++C SVFDIF Q GH+ ++ L+VDSISSLI
Sbjct: 161 ISGSALNQTVMSNILCHSVFDIFSMFDVLHQLEISLRSQ-GHSGDFKVQSLIVDSISSLI 219
Query: 113 TPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
TP+LGG G+ GHALM +AG LLKKLAH+HN+AVL+TN
Sbjct: 220 TPILGGGGSQGHALMTSAGILLKKLAHEHNIAVLVTN 256
>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 951
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Frame = -2
Query: 272 NKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQT--GHNLKMLVVDSISSLITPVLG 99
N+ILQ+V+ N++C SVFDIF+ Q G +++L++DSIS LITPVLG
Sbjct: 170 NQILQRVMSNILCHSVFDIFEMFDVLHKLEYQLRSQDRGGCQMRLLIIDSISLLITPVLG 229
Query: 98 GNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
G + G ALM +AG+LLKKLA HNLAVL+TN
Sbjct: 230 GTSSQGRALMVSAGYLLKKLADQHNLAVLVTN 261
>gb|EMJ07684.1| hypothetical protein PRUPE_ppa019062mg, partial [Prunus persica]
Length = 308
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/91 (49%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Frame = -2
Query: 269 KILQQVLDNLICRSVFDIFKXXXXXXXXXXXXN--YQTGHNLKMLVVDSISSLITPVLGG 96
+I Q++++ ++C SVFDIF Q G ++ML+VDSISSLITP+LG
Sbjct: 171 RIFQRIMNGIVCHSVFDIFTMFNVLHRLVINFPSQLQKGGQVRMLIVDSISSLITPILGN 230
Query: 95 NGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+G+ G ALM +AG++LKKLAH+HN+AVL+TN
Sbjct: 231 SGSQGRALMISAGYMLKKLAHEHNVAVLVTN 261
>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 92.8 bits (229), Expect = 4e-17
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Frame = -2
Query: 299 DHAYSAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXN--YQTGHN-LKMLVVDS 129
D + V N IL++V+ ++C SVFDIF QTG + +++L+VDS
Sbjct: 162 DTIFKEVKQN-ILEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDS 220
Query: 128 ISSLITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVL 12
ISSLITP+LGG+G+HG ALM +AGFLLKKLAH+HNLAV+
Sbjct: 221 ISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVV 259
>ref|XP_004251314.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Solanum
lycopersicum]
Length = 314
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
Frame = -2
Query: 278 NDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXN------YQTGHNLKMLVVDSISSL 117
+D LQ+V++N++C SVFDIF Q +++ML++DSISSL
Sbjct: 160 SDLSALQEVMNNIVCFSVFDIFPLFEVLHQLKNNLRSQGINDMQKDQHIRMLIIDSISSL 219
Query: 116 ITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
I P+LGG GAHGHALM + GFLLK+LAH+H++++L+TN
Sbjct: 220 IAPILGG-GAHGHALMVSVGFLLKRLAHEHDISILVTN 256
>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
repair protein RAD51 homolog 4-like [Cucumis sativus]
Length = 314
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Frame = -2
Query: 290 YSAVNDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQT---GHNLKMLVVDSISS 120
+ ++ +LQ+V+ ++ C SVF+IF QT +++L++DSISS
Sbjct: 157 FVCTSEQSMLQRVMTSISCHSVFNIFALFDVLHQLEFNLRSQTCKGDRRVQLLIIDSISS 216
Query: 119 LITPVLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
LITP+LGG+ + GHALM +AG LLKK+AH+HN+AVL+TN
Sbjct: 217 LITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTN 255
>gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair protein RAD51 homolog 4 (TRAD)
from Homo sapiens gi|6174940 [Arabidopsis thaliana]
Length = 285
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Frame = -2
Query: 278 NDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHN---LKMLVVDSISSLITP 108
+D + Q+V+ ++C +V+DI+ Q N L++LVVDSISSLITP
Sbjct: 139 SDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLRLLVVDSISSLITP 198
Query: 107 VLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+LGG+G+ G ALM G+LLKKLAH+H++A+L+TN
Sbjct: 199 ILGGSGSQGRALMVAIGYLLKKLAHEHSIAILVTN 233
>ref|NP_172254.2| DNA repair protein RAD51 homolog 4 [Arabidopsis thaliana]
gi|83305360|sp|Q9LQQ2.2|RA51D_ARATH RecName: Full=DNA
repair protein RAD51 homolog 4; Short=AtRAD51D
gi|57283103|emb|CAD70703.1| putative DNA recombination
protein [Arabidopsis thaliana]
gi|58430742|dbj|BAD89165.1| AtRAD51D [Arabidopsis
thaliana] gi|90969171|gb|ABE02570.1| RAD51D splice
variant a [Arabidopsis thaliana]
gi|90969179|gb|ABE02658.1| RAD51D splice variant a
[Arabidopsis thaliana] gi|332190052|gb|AEE28173.1| DNA
repair protein RAD51-like 4 [Arabidopsis thaliana]
Length = 322
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Frame = -2
Query: 278 NDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHN---LKMLVVDSISSLITP 108
+D + Q+V+ ++C +V+DI+ Q N L++LVVDSISSLITP
Sbjct: 161 SDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLRLLVVDSISSLITP 220
Query: 107 VLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+LGG+G+ G ALM G+LLKKLAH+H++A+L+TN
Sbjct: 221 ILGGSGSQGRALMVAIGYLLKKLAHEHSIAILVTN 255
>ref|NP_001077479.1| DNA repair protein RAD51 homolog 4 [Arabidopsis thaliana]
gi|332190053|gb|AEE28174.1| DNA repair protein
RAD51-like 4 [Arabidopsis thaliana]
Length = 304
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Frame = -2
Query: 278 NDNKILQQVLDNLICRSVFDIFKXXXXXXXXXXXXNYQTGHN---LKMLVVDSISSLITP 108
+D + Q+V+ ++C +V+DI+ Q N L++LVVDSISSLITP
Sbjct: 143 SDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLRLLVVDSISSLITP 202
Query: 107 VLGGNGAHGHALMATAGFLLKKLAHDHNLAVLITN 3
+LGG+G+ G ALM G+LLKKLAH+H++A+L+TN
Sbjct: 203 ILGGSGSQGRALMVAIGYLLKKLAHEHSIAILVTN 237