BLASTX nr result
ID: Catharanthus22_contig00040842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00040842
(575 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ... 76 7e-12
gb|EOY16862.1| Rad21/Rec8-like family protein isoform 3 [Theobro... 65 1e-08
gb|EOY16861.1| Rad21/Rec8-like family protein isoform 2 [Theobro... 65 1e-08
gb|EOY16860.1| Rad21/Rec8-like family protein isoform 1 [Theobro... 65 1e-08
emb|CBI40063.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote... 64 2e-08
ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote... 64 4e-08
gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus nota... 60 3e-07
ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Popul... 60 4e-07
ref|XP_002331697.1| predicted protein [Populus trichocarpa] 60 4e-07
ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 prote... 58 2e-06
>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
protein, putative [Ricinus communis]
Length = 781
Score = 75.9 bits (185), Expect = 7e-12
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 32/188 (17%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FD+ IV N V+K+C++D S+ ++RK TAL A RA ++ LP+ E LI
Sbjct: 446 RKRKCVFDDTIVFPNNVIKQCIEDSSDLVSKRKKAPHTALTAWRASRVSRLPRCFLESLI 505
Query: 387 PCVV-DFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAE---------ICENP 238
PC D SL+S K+ +F ++ P + S + E I +
Sbjct: 506 PCTASDLRSLLSGKKLKISESLDTVRVPQTFTSECPTARRSVETVESPEKLDKSKILVDG 565
Query: 237 VVVKPLD--VQISVEAATS-DMQ-------------------MSYEQNSIAPVTPVNQSA 124
+V+ +D +++V A+ + D Q S EQ IAP TP+ +
Sbjct: 566 RLVETMDSLEKLNVSASPAVDRQGKTVEPRATLGMSESPTAIRSLEQERIAPETPILHTK 625
Query: 123 SLRLLDVP 100
SLR + P
Sbjct: 626 SLRTFESP 633
>gb|EOY16862.1| Rad21/Rec8-like family protein isoform 3 [Theobroma cacao]
Length = 797
Score = 65.1 bits (157), Expect = 1e-08
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FD+ IV N ++++ + D S+ ++R R+ TALDA + ++ L +S E +
Sbjct: 566 RKRKCVFDDMIVFPNDLMRQWIKDASDLVSKR--RKCTALDARKTHRVFNLSQSFSEASV 623
Query: 387 PCVVDFGSLVSRTKIAGV-SVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVK----- 226
PC + SL ++ + SV+ + ++++P S AEI V ++
Sbjct: 624 PCTSELKSLYYGKRLRLLESVKIMKSPEKIDVSEAPPIGGSFDEAEIAPETVEIRDPPAM 683
Query: 225 ------PL----DVQISVEAAT----SDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCE 88
PL Q + T S + EQ IAP TPV S S+R L+ P +
Sbjct: 684 LNLSKFPLFDGSSEQTGIAPQTPRRHSPPLVGGEQMEIAPQTPVPHSKSVRRLESPEYLK 743
Query: 87 ---------------PDMLRSASPFDSLDKRPNFNKDLVLDIAL 1
+ + +S + ++K P+ +KD VLD+ L
Sbjct: 744 CANLFEVGHANLDPTESIEKESSLIEIVEKEPSLSKDEVLDLNL 787
>gb|EOY16861.1| Rad21/Rec8-like family protein isoform 2 [Theobroma cacao]
Length = 856
Score = 65.1 bits (157), Expect = 1e-08
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FD+ IV N ++++ + D S+ ++R R+ TALDA + ++ L +S E +
Sbjct: 566 RKRKCVFDDMIVFPNDLMRQWIKDASDLVSKR--RKCTALDARKTHRVFNLSQSFSEASV 623
Query: 387 PCVVDFGSLVSRTKIAGV-SVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVK----- 226
PC + SL ++ + SV+ + ++++P S AEI V ++
Sbjct: 624 PCTSELKSLYYGKRLRLLESVKIMKSPEKIDVSEAPPIGGSFDEAEIAPETVEIRDPPAM 683
Query: 225 ------PL----DVQISVEAAT----SDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCE 88
PL Q + T S + EQ IAP TPV S S+R L+ P +
Sbjct: 684 LNLSKFPLFDGSSEQTGIAPQTPRRHSPPLVGGEQMEIAPQTPVPHSKSVRRLESPEYLK 743
Query: 87 ---------------PDMLRSASPFDSLDKRPNFNKDLVLDIAL 1
+ + +S + ++K P+ +KD VLD+ L
Sbjct: 744 CANLFEVGHANLDPTESIEKESSLIEIVEKEPSLSKDEVLDLNL 787
>gb|EOY16860.1| Rad21/Rec8-like family protein isoform 1 [Theobroma cacao]
Length = 887
Score = 65.1 bits (157), Expect = 1e-08
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FD+ IV N ++++ + D S+ ++R R+ TALDA + ++ L +S E +
Sbjct: 566 RKRKCVFDDMIVFPNDLMRQWIKDASDLVSKR--RKCTALDARKTHRVFNLSQSFSEASV 623
Query: 387 PCVVDFGSLVSRTKIAGV-SVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVK----- 226
PC + SL ++ + SV+ + ++++P S AEI V ++
Sbjct: 624 PCTSELKSLYYGKRLRLLESVKIMKSPEKIDVSEAPPIGGSFDEAEIAPETVEIRDPPAM 683
Query: 225 ------PL----DVQISVEAAT----SDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCE 88
PL Q + T S + EQ IAP TPV S S+R L+ P +
Sbjct: 684 LNLSKFPLFDGSSEQTGIAPQTPRRHSPPLVGGEQMEIAPQTPVPHSKSVRRLESPEYLK 743
Query: 87 ---------------PDMLRSASPFDSLDKRPNFNKDLVLDIAL 1
+ + +S + ++K P+ +KD VLD+ L
Sbjct: 744 CANLFEVGHANLDPTESIEKESSLIEIVEKEPSLSKDEVLDLNL 787
>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 64.3 bits (155), Expect = 2e-08
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKCLFDEKIVLS+ LK+ + S+ +R+ TA DA + ++ L + E LI
Sbjct: 359 RKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLEALI 418
Query: 387 PCV-VDFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVKPLDVQ 211
PC+ ++ SL K+ + D + T
Sbjct: 419 PCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPGSPT---------------------- 456
Query: 210 ISVEAATSDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCEPDMLRSASPFDSLDKRPNF 31
+ ++ +IAP TP S + + +V ++ + D + AS F+S +R +
Sbjct: 457 ---------VNQLLKETAIAPETPAIHSTLMGVSEVHKLTDSDRVVPASSFESSQQRQSS 507
Query: 30 NKDLVLDIAL 1
+++ DI +
Sbjct: 508 SENEEFDILM 517
>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
vinifera]
Length = 756
Score = 64.3 bits (155), Expect = 2e-08
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKCLFDEKIVLS+ LK+ + S+ +R+ TA DA + ++ L + E LI
Sbjct: 494 RKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLEALI 553
Query: 387 PCV-VDFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVKPLDVQ 211
PC+ ++ SL K+ + D + T
Sbjct: 554 PCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPGSPT---------------------- 591
Query: 210 ISVEAATSDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCEPDMLRSASPFDSLDKRPNF 31
+ ++ +IAP TP S + + +V ++ + D + AS F+S +R +
Sbjct: 592 ---------VNQLLKETAIAPETPAIHSTLMGVSEVHKLTDSDRVVPASSFESSQQRQSS 642
Query: 30 NKDLVLDIAL 1
+++ DI +
Sbjct: 643 SENEEFDILM 652
>ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
tuberosum]
Length = 627
Score = 63.5 bits (153), Expect = 4e-08
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FDE IV+ N V K + D ++ +R+ ++ A + K+ +LP+S E LI
Sbjct: 392 RKRKCIFDESIVIPNEVFKHWIGDANDLVCKRRKAPHSSYFAWKVHKISSLPQSFEEPLI 451
Query: 387 PCVVDFGSLVSRTKIAGV---SVETAATTTDSFIAQSPVTQMSAKPAEIC---------- 247
PC + + + +KI ET + SP S + I
Sbjct: 452 PCSLSIDIISAISKIRSARHGPAETVEVPLCEDMPDSPYKLRSGEEIPIAPATSLHEYLP 511
Query: 246 ENPVVVK---------PLDVQISVEAATSDMQMSYEQNSIAPVTPVNQSASLRLLD 106
E+P ++ + + V + + ++ EQ IAP TPV S+SLR D
Sbjct: 512 ESPGTLRCGEQIPNAPAASLHVGVPESHNTLRYDGEQTPIAPATPVTGSSSLRFHD 567
>gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus notabilis]
Length = 900
Score = 60.5 bits (145), Expect = 3e-07
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Frame = -3
Query: 567 KKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERLI 388
+KRKC+FD+ IVL N+VLK + D S+ ++R+ QTAL RA + +L FE LI
Sbjct: 543 RKRKCIFDDVIVLPNKVLKTSIYDASDLVSKRRKVAQTALAVWRASR--SLHNEFFEPLI 600
Query: 387 PCV-VDFGSLVSRTKIAGV-SVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVKPLDV 214
PC + SL S K+ + SV+T + I + P PV +
Sbjct: 601 PCASSELRSLFSVKKLKIITSVKTVEPPIELNIPERP--------------PVAIS---- 642
Query: 213 QISVEAATSDMQMSYEQNSIAPVTPVNQSASLRLLDVPRVCEPDMLRSASP--FDSLDKR 40
EQ IAP TPV +S + + P + P F++L++
Sbjct: 643 ---------------EQICIAPETPVQRSTFPKSFEGPVSPQTPNYDRVRPELFENLEQE 687
Query: 39 PNFNKDLVLDIAL 1
P +D LD++L
Sbjct: 688 PASIRDEELDLSL 700
>ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Populus trichocarpa]
gi|550319959|gb|ERP51050.1| Sister chromatid cohesion 1
protein 2 [Populus trichocarpa]
Length = 770
Score = 60.1 bits (144), Expect = 4e-07
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = -3
Query: 573 ARKKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFER 394
A +KRKC FD+ +V N V+K C+++ + ++R+ TA +AC+ L K E
Sbjct: 387 ALRKRKCFFDDVVVFPNNVIKECIENTGDLVSKRRKLPHTAFAVWKACRFSNLDKCFLEP 446
Query: 393 LIPCV-VDFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAE 253
LIPC ++ GSL RTK + ET + S + P ++ A ++
Sbjct: 447 LIPCASLELGSLF-RTKKLQIP-ETVKSVGGSVEIEEPSKKLDASESQ 492
>ref|XP_002331697.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 60.1 bits (144), Expect = 4e-07
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = -3
Query: 573 ARKKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFER 394
A +KRKC FD+ +V N V+K C+++ + ++R+ TA +AC+ L K E
Sbjct: 387 ALRKRKCFFDDVVVFPNNVIKECIENTGDLVSKRRKLPHTAFAVWKACRFSNLDKCFLEP 446
Query: 393 LIPCV-VDFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAE 253
LIPC ++ GSL RTK + ET + S + P ++ A ++
Sbjct: 447 LIPCASLELGSLF-RTKKLQIP-ETVKSVGGSVEIEEPSKKLDASESQ 492
>ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Fragaria
vesca subsp. vesca]
Length = 560
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = -3
Query: 570 RKKRKCLFDEKIVLSNRVLKRCLDDKSNSATRRKGRRQTALDAPRACKMPTLPKSLFERL 391
++KR+C DE VL N V+K+ ++D S+ ++R+ +TALDA + C++ L ++ E
Sbjct: 438 KRKRRCRIDEITVLPNAVIKQSINDASDLVSKRRKVPETALDAWKTCQIRNLSQTFLEPF 497
Query: 390 IPCV-VDFGSLVSRTKIAGVSVETAATTTDSFIAQSPVTQMSAKPAEICENPVVVKPLDV 214
IP V + SL R+ I D F P + + EI P V++ +++
Sbjct: 498 IPSVSEEIRSLFHRSVIDSAETAEPPVKPDVF---EPPSAGRPEQVEITPEPPVLEHMEI 554
Query: 213 QISVE 199
+ S E
Sbjct: 555 EPSKE 559