BLASTX nr result
ID: Catharanthus22_contig00040799
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00040799
(532 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 92 1e-16
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 91 2e-16
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 79 6e-13
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 77 2e-12
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 76 5e-12
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 74 2e-11
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 74 2e-11
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 72 6e-11
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 71 1e-10
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 71 1e-10
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 69 7e-10
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g... 65 7e-09
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi... 65 1e-08
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops... 64 2e-08
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr... 64 2e-08
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A... 64 3e-08
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part... 64 3e-08
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li... 59 5e-07
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li... 59 7e-07
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 59 7e-07
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
lycopersicum]
Length = 617
Score = 91.7 bits (226), Expect = 1e-16
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
L HF+RV+S GERS EGE+ KC+C+NPGRL+RGEGGGFFVELNYHGS DS+ AS++R+
Sbjct: 561 LAHFVRVVSLGERS-EGEEVKCICVNPGRLSRGEGGGFFVELNYHGSCDSSSASVLRI 617
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/58 (70%), Positives = 52/58 (89%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
L HF+RV+S GERS EGE+ KC+C+NPGRL+RGEGGGFF+ELNYHGS DS+ AS++R+
Sbjct: 561 LAHFVRVISLGERS-EGEEVKCICVNPGRLSRGEGGGFFMELNYHGSCDSSSASVLRI 617
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
L F++VLS G R++ E KC+C+NPGRLA+GEGGG FVELNY GSPD AS+IR+
Sbjct: 566 LASFVKVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPDKTSASVIRI 623
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ +F++VLS G R + EQ KC+CINPGRLA+GEGGG FVELNY GSPD AS+I
Sbjct: 564 MKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKGEGGGTFVELNYRGSPDKMNASVI 619
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ HF++V+S GE E EQ +C+C+NPGRLA+GEGGG FVELNY G PD A ++ +
Sbjct: 565 MKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPDQINAMVVSI 622
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ +FM+VL+ GE EQ KC+CINPGRLA+GEGGG F ELNY GSPD ASII
Sbjct: 564 MKYFMKVLTLGEGE---EQRKCICINPGRLAKGEGGGTFAELNYQGSPDKMNASII 616
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ HF++V GE E EQ KC+C+NPGRLA+GEGGG FVELNY+G+PD+ ASII
Sbjct: 558 MKHFVKVKWSGE---EKEQVKCICVNPGRLAKGEGGGTFVELNYYGNPDTCNASII 610
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F++VLS G R++ EQ KC+C+NPGRLA+GEG G F E+ YHGSP+ ASII +
Sbjct: 563 MKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMHASIISI 620
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F++VLS G R++ EQ +C+C+NPGRLA+GEG G F E+ YHGSP+ ASII +
Sbjct: 563 MKYFIKVLSLGGRNEGEEQKRCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 620
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/57 (63%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQH-KCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
L +F++VLS GE GE KC+C+NPGRL++GEGGG FVELNY+GSPD++ ASII
Sbjct: 566 LKYFVKVLSLGE----GEPPVKCICVNPGRLSKGEGGGTFVELNYYGSPDTSNASII 618
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQ-HKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ +F++VLS G S+ EQ KC+CINPGRLA+G GGG FVEL Y GSPD ASII
Sbjct: 563 IKYFVKVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPDKMNASII 619
>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
[Arabidopsis thaliana]
Length = 620
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F+++LS GE E + KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 566 MRYFVKILSLGE---EEDAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMHASIISI 620
>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
subunit B family [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F+++LS GE E KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 565 MRYFVKILSLGE---EENAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMRASIISI 619
>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
thaliana]
Length = 620
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F+++LS GE E + KC+C+NPGRLA+GEG G +VEL Y G P+S ASII +
Sbjct: 566 MRYFVKILSLGE---EEDAAKCVCVNPGRLAKGEGAGTYVELTYKGGPESMHASIISI 620
>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
gi|557087677|gb|ESQ28529.1| hypothetical protein
EUTSA_v10018287mg [Eutrema salsugineum]
Length = 622
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F++VLS GE + KC+C+NPGRLA+GEG G FVEL+Y G P+S ASII +
Sbjct: 568 MRYFVKVLSLGEGE---DAVKCVCVNPGRLAKGEGAGTFVELSYKGGPESMHASIISI 622
>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
L F++ L GE S + +CLCINPGRLA+G GG FVEL+Y +PD ASIIR+
Sbjct: 571 LAPFIKALPFGEGSDTEKYSRCLCINPGRLAKGVSGGTFVELSYLNNPDQTSASIIRI 628
>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
gi|482569343|gb|EOA33531.1| hypothetical protein
CARUB_v10019947mg, partial [Capsella rubella]
Length = 639
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
+ +F++VLS GE + KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 585 MRYFVKVLSLGEGE---DAAKCVCVNPGRLAKGEGAGTFVELTYKGCPESMHASIISI 639
>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
Length = 410
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 357
L F++VLS E S+E + +C+NPGRLA+G GGG FVELNY+ D ASIIR+
Sbjct: 355 LAPFVKVLSLDESSEEPKHF--ICVNPGRLAKGIGGGTFVELNYNEDTDKTSASIIRI 410
>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
max]
Length = 577
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQH-KCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ +F++VLS EG H KC+ INPGRLA+GEGGG FVEL+Y G+ D ASI+
Sbjct: 522 IKYFVKVLSS---ENEGINHTKCIAINPGRLAKGEGGGTFVELDYCGASDQINASIV 575
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = -3
Query: 530 LTHFMRVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 363
+ +F+++LS KC+ +NPGRLA+GEGGG FVEL+Y G D ASI+
Sbjct: 568 IKYFVKMLSSESEGINNSNSKCIAVNPGRLAKGEGGGTFVELHYGGGSDQINASIV 623