BLASTX nr result
ID: Catharanthus22_contig00040783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00040783
(401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP43914.1| integrase [Gossypium raimondii] 166 3e-39
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 161 7e-38
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 157 1e-36
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 157 1e-36
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 154 9e-36
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 153 3e-35
gb|AAP43919.1| integrase [Gossypium hirsutum] 152 3e-35
emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera] 152 6e-35
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 151 7e-35
emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera] 150 2e-34
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 146 2e-33
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera] 146 3e-33
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 146 3e-33
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 146 3e-33
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 144 9e-33
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 144 9e-33
emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera] 142 3e-32
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera] 142 3e-32
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 138 9e-31
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 137 2e-30
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 166 bits (420), Expect = 3e-39
Identities = 73/133 (54%), Positives = 103/133 (77%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
KRHARW+EFIE F Y + YKK K+N+VADALSRR+TL+ TL ++LGFE L++LYA+ +D
Sbjct: 67 KRHARWVEFIESFPYGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGFEYLKDLYATDSD 126
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F I+D+C K+ H G+L+ L +P CS R LLV+EAH GGL+GHFG+++TY+
Sbjct: 127 FASIYDACEHGAFHKFYKHDGYLFQNNRLCLPKCSMRELLVREAHSGGLMGHFGVTKTYD 186
Query: 40 ILHKHFFWPHMKR 2
+LH+HF+WP+M++
Sbjct: 187 VLHEHFYWPNMRK 199
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 161 bits (408), Expect = 7e-38
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
KRHARW+EFIE F YV+ YKK K+NVVADALSRR+ L+ +L A++LGFE ++ LYA+ +D
Sbjct: 1288 KRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSD 1347
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F+ I+ SC F KY H GFL+++ L IP S R L ++EAH GGL+GHFG+S+T
Sbjct: 1348 FEKIYSSCEKFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIK 1407
Query: 40 ILHKHFFWPHMKR 2
++ HF WPHMKR
Sbjct: 1408 VMQDHFHWPHMKR 1420
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 157 bits (397), Expect = 1e-36
Identities = 72/133 (54%), Positives = 100/133 (75%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KENVVADALSRR+ LI TL +++LGF+ ++ LYA+ +D
Sbjct: 1050 RRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKFLYANDSD 1109
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F IF C + P EK+ + FL+ E +L +P CS R L V+EAHCGGL+GHFG+ +T
Sbjct: 1110 FGEIFAECKLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHCGGLMGHFGVPKTLE 1169
Query: 40 ILHKHFFWPHMKR 2
IL +HF+WP M++
Sbjct: 1170 ILSEHFYWPSMRK 1182
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 157 bits (397), Expect = 1e-36
Identities = 72/133 (54%), Positives = 100/133 (75%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KENVVADALSRR+ LI TL +++LGF+ ++ LYA+ +D
Sbjct: 1050 RRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKFLYANDSD 1109
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F IF C + P EK+ + FL+ E +L +P CS R L V+EAHCGGL+GHFG+ +T
Sbjct: 1110 FGEIFAECKLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHCGGLMGHFGVPKTLE 1169
Query: 40 ILHKHFFWPHMKR 2
IL +HF+WP M++
Sbjct: 1170 ILSEHFYWPSMRK 1182
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 154 bits (390), Expect = 9e-36
Identities = 69/132 (52%), Positives = 99/132 (75%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
KRHARW+EFIE F YV+ YKK K+NVVADALS+R+TL+ TL +++GFE ++E+Y + +D
Sbjct: 797 KRHARWVEFIETFAYVIKYKKGKDNVVADALSQRYTLLSTLNVKLMGFEQIKEVYETDHD 856
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F+ ++ +C F + +Y FL++E L +P CS R L V+EAH GGL+GHFGI++T
Sbjct: 857 FQEVYKACEKFASGRYFRQDKFLFYENRLCVPNCSLRDLFVREAHGGGLMGHFGIAKTLE 916
Query: 40 ILHKHFFWPHMK 5
++ +HF WPHMK
Sbjct: 917 VMTEHFRWPHMK 928
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 153 bits (386), Expect = 3e-35
Identities = 71/133 (53%), Positives = 99/133 (74%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KENVVADALSRR+ LI TL +++LGF+ ++ LYA+ +D
Sbjct: 807 RRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKFLYANDSD 866
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F IF C + P EK+ + FL+ E +L +P CS R L V+EAH GGL+GHFG+ +T
Sbjct: 867 FGEIFAECKLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHYGGLMGHFGVPKTLE 926
Query: 40 ILHKHFFWPHMKR 2
IL +HF+WP M++
Sbjct: 927 ILSEHFYWPSMRK 939
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 152 bits (385), Expect = 3e-35
Identities = 73/133 (54%), Positives = 95/133 (71%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
KRHARW+EFIE F Y++ YK +NVVADALSRR+TLI TL A++LGFE ++ELY D
Sbjct: 67 KRHARWVEFIETFPYMIQYKIGNDNVVADALSRRYTLITTLNAKVLGFEHIKELYDDDTD 126
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F I+ +C EK+ + G L+ L IP CS R LL+ EAH GGL+GHFG+++T +
Sbjct: 127 FSHIYKNCGHTAFEKFYLVDGLLFRLNRLCIPKCSMRELLIHEAHSGGLMGHFGVAKTLD 186
Query: 40 ILHKHFFWPHMKR 2
IL +HF WPHMK+
Sbjct: 187 ILQEHFHWPHMKK 199
>emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera]
Length = 340
Score = 152 bits (383), Expect = 6e-35
Identities = 69/133 (51%), Positives = 97/133 (72%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KEN+VADALSRR+ L+ TL A++LGFE ++ELY + +D
Sbjct: 69 RRHAKWVEFIETFPYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYVNDDD 128
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C K+ H G+L+ E L +P LLV+EAH GGL+GHFG+ +T +
Sbjct: 129 FASVYGACEKTTFGKFYRHLGYLFRENRLRVPNSFMNDLLVREAHGGGLMGHFGVRKTLD 188
Query: 40 ILHKHFFWPHMKR 2
+LH+HFFWP MKR
Sbjct: 189 VLHEHFFWPKMKR 201
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 151 bits (382), Expect = 7e-35
Identities = 69/133 (51%), Positives = 97/133 (72%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KEN+V DALSRR+ L+ TL A++LGFE ++ELYA+ +D
Sbjct: 689 RRHAKWVEFIETFPYVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDD 748
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C K+ G+L+ E L +P S R LLV+EAH GGL+GHFG+ +T +
Sbjct: 749 FASVYGACEKVAFGKFYRLDGYLFRENRLCVPNSSMRELLVREAHEGGLMGHFGVRKTLD 808
Query: 40 ILHKHFFWPHMKR 2
+LH+H FWP MKR
Sbjct: 809 VLHEHIFWPKMKR 821
>emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]
Length = 337
Score = 150 bits (379), Expect = 2e-34
Identities = 68/133 (51%), Positives = 97/133 (72%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KEN+VADALSRR+ L+ TL A++LGFE ++ELYA+ +D
Sbjct: 66 RRHAKWVEFIETFSYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYANDDD 125
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C K+ G+L+ + L +P S L+V+EAH GGL+GHFG+ +T N
Sbjct: 126 FASVYGACEKVAFGKFYRLDGYLFRDNRLCVPNSSMPELIVREAHRGGLMGHFGVRKTLN 185
Query: 40 ILHKHFFWPHMKR 2
+LH+HFFW MKR
Sbjct: 186 VLHEHFFWSKMKR 198
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 146 bits (369), Expect = 2e-33
Identities = 68/133 (51%), Positives = 95/133 (71%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KEN+V +ALSRR+ L+ TL A++LGFE ++ELYA+ ND
Sbjct: 550 RRHAKWVEFIETFPYVVKYKQGKENIVVNALSRRYALVSTLNAKLLGFEYVKELYANDND 609
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C K+ G+L+ E L +P S LLV EAH GGL+GHFG+ T +
Sbjct: 610 FASLYGACEKAAFGKFYRLDGYLFRENRLCVPNSSMCELLVHEAHGGGLMGHFGVRRTLD 669
Query: 40 ILHKHFFWPHMKR 2
+L++HFFWP MKR
Sbjct: 670 VLYEHFFWPKMKR 682
>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
Length = 364
Score = 146 bits (368), Expect = 3e-33
Identities = 68/133 (51%), Positives = 96/133 (72%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YK+ KEN+VADALSRR+ L+ TL A++LGFE ++ELYA+ ND
Sbjct: 67 RRHAKWVEFIETFPYVIKYKQCKENIVADALSRRYALVSTLNAKLLGFEYVKELYANDND 126
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C K+ G+L+ + L +P S LLV+EAH G +GHFG+ +T +
Sbjct: 127 FASVYGACEKTAFGKFYRLDGYLFRKNILCVPNSSMCELLVREAHGGDXMGHFGVRKTLD 186
Query: 40 ILHKHFFWPHMKR 2
+LH+HFFWP MKR
Sbjct: 187 VLHEHFFWPKMKR 199
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 146 bits (368), Expect = 3e-33
Identities = 68/134 (50%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YKK KEN+VADALSR++ L+ L+ ++ G E ++ELY++ D
Sbjct: 1099 RRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLD 1158
Query: 220 FKGIFDSCLVFPN-EKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETY 44
F + C EKY IH GFL+ +L +P CS RLLL++E H GGL+GHFG +TY
Sbjct: 1159 FSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTY 1218
Query: 43 NILHKHFFWPHMKR 2
++L HF+WP M+R
Sbjct: 1219 DMLADHFYWPKMRR 1232
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 146 bits (368), Expect = 3e-33
Identities = 68/134 (50%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YKK KEN+VADALSR++ L+ L+ ++ G E ++ELY++ D
Sbjct: 67 RRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLD 126
Query: 220 FKGIFDSCLVFPN-EKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETY 44
F + C EKY IH GFL+ +L +P CS RLLL++E H GGL+GHFG +TY
Sbjct: 127 FSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTY 186
Query: 43 NILHKHFFWPHMKR 2
++L HF+WP M+R
Sbjct: 187 DMLADHFYWPKMRR 200
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 144 bits (364), Expect = 9e-33
Identities = 70/132 (53%), Positives = 95/132 (71%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE FLYV+ YK+ KEN+VADALSRR+ L+ TL A++LGFE ++ELYA+ +D
Sbjct: 815 RRHAKWVEFIETFLYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYANDDD 874
Query: 220 FKGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYN 41
F ++ +C EK E L +P S R LLV+EAH GGL+GHFG+ +T +
Sbjct: 875 FASVYGAC-----EKTTF-------ENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLD 922
Query: 40 ILHKHFFWPHMK 5
+LH+HFFWP MK
Sbjct: 923 VLHEHFFWPKMK 934
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 144 bits (364), Expect = 9e-33
Identities = 68/134 (50%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ YKK KEN+VADALSR++ L+ L+ ++ G E ++ELY + D
Sbjct: 67 RRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVPGIESIKELYPADLD 126
Query: 220 FKGIFDSCLVFPN-EKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETY 44
F + C EKY IH GFL+ +L +P CS RLLL++E H GGL+GHFG +TY
Sbjct: 127 FSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTY 186
Query: 43 NILHKHFFWPHMKR 2
++L HF+WP M+R
Sbjct: 187 DMLADHFYWPKMRR 200
>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
Length = 1159
Score = 142 bits (359), Expect = 3e-32
Identities = 66/132 (50%), Positives = 93/132 (70%)
Frame = -2
Query: 397 RHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASANDF 218
RH +W+EFIE F YV+ YK+ KEN+V DALSRR+ L+ TL A++LGFE ++ELYA+ +D
Sbjct: 763 RHPKWVEFIETFSYVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDL 822
Query: 217 KGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYNI 38
++ +C K+ G+L+ E +L +P S LLV +AH GGL+GHFG+ +T +
Sbjct: 823 ASVYGACEKAAFGKFYRLDGYLFRENKLCVPNSSMCELLVCKAHGGGLMGHFGVRKTLEV 882
Query: 37 LHKHFFWPHMKR 2
LH+HFFWP MKR
Sbjct: 883 LHEHFFWPKMKR 894
>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
Length = 366
Score = 142 bits (359), Expect = 3e-32
Identities = 66/132 (50%), Positives = 93/132 (70%)
Frame = -2
Query: 397 RHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASANDF 218
RH +W+EFIE F YV+ YK+ KEN+V DALSRR+ L+ TL A++LGFE ++ELYA+ +D
Sbjct: 68 RHPKWVEFIETFSYVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYANDDDL 127
Query: 217 KGIFDSCLVFPNEKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETYNI 38
++ +C K+ G+L+ E +L +P S LLV +AH GGL+GHFG+ +T +
Sbjct: 128 ASVYGACEKAAFGKFYRLDGYLFRENKLCVPNSSMCELLVCKAHGGGLMGHFGVRKTLEV 187
Query: 37 LHKHFFWPHMKR 2
LH+HFFWP MKR
Sbjct: 188 LHEHFFWPKMKR 199
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 138 bits (347), Expect = 9e-31
Identities = 65/134 (48%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ +KK KENV+ADALSRR+ ++ L +I G E ++E YA +D
Sbjct: 437 RRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDD 496
Query: 220 FKGIFDSCLVFPN-EKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETY 44
FK + +C+ K+++ GF++ +L IP S R+LL++EAH GGL+GHFG+ +T
Sbjct: 497 FKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTE 556
Query: 43 NILHKHFFWPHMKR 2
+IL HFFWP M+R
Sbjct: 557 DILADHFFWPKMRR 570
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 137 bits (344), Expect = 2e-30
Identities = 65/134 (48%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = -2
Query: 400 KRHARWMEFIEIFLYVMGYKKDKENVVADALSRRHTLIFTLQAQILGFEILEELYASAND 221
+RHA+W+EFIE F YV+ +KK KENV+ADALSRR+ ++ L +I G E ++E YA +D
Sbjct: 1124 RRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDD 1183
Query: 220 FKGIFDSCLVFPN-EKYLIHGGFLYHEGELWIPPCSSRLLLVKEAHCGGLIGHFGISETY 44
FK + +C K+++ GF++ +L IP S R+LL++EAH GGL+GHFG+ +T
Sbjct: 1184 FKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTE 1243
Query: 43 NILHKHFFWPHMKR 2
+IL HFFWP M+R
Sbjct: 1244 DILADHFFWPKMRR 1257