BLASTX nr result
ID: Catharanthus22_contig00040760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00040760
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA73042.1| polyprotein [Ananas comosus] 135 3e-35
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera] 131 3e-33
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera] 131 3e-33
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 123 1e-31
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] 121 2e-31
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 124 6e-31
gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus pe... 120 8e-31
gb|EMJ12330.1| hypothetical protein PRUPE_ppa026240mg, partial [... 120 1e-30
emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera] 126 1e-30
emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera] 127 1e-30
gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc... 121 2e-30
gb|EMJ02309.1| hypothetical protein PRUPE_ppa024392mg [Prunus pe... 115 4e-30
gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|... 122 5e-30
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 120 7e-30
gb|EOY31685.1| Uncharacterized protein TCM_038736 [Theobroma cacao] 119 7e-30
emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group] 121 7e-30
gb|ABA93015.2| retrotransposon protein, putative, Ty3-gypsy subc... 121 9e-30
gb|ABA97045.1| retrotransposon protein, putative, Ty3-gypsy subc... 120 1e-29
gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subc... 120 1e-29
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group] 120 1e-29
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 135 bits (340), Expect(2) = 3e-35
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LTRLTHKG+K W+ +CE+SFQELKQRL T PI LP YV+YSDAS NGLGCVLMQ
Sbjct: 271 LTRLTHKGVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSDASLNGLGCVLMQ 330
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
D VIAYASRQLK YEKNYPT + +LAAVVF
Sbjct: 331 DDKVIAYASRQLKEYEKNYPTHDLELAAVVF 361
Score = 38.9 bits (89), Expect(2) = 3e-35
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LK+WRHYLY +CEV+T HKS
Sbjct: 363 LKLWRHYLYGERCEVYTDHKS 383
>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
Length = 984
Score = 131 bits (329), Expect(2) = 3e-33
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT KG+K +WS CE SFQELK RLV+ PI +P SG +V+YSDAS GLGCVLMQ
Sbjct: 313 LTKLTQKGVKFEWSDDCECSFQELKNRLVSAPILTIPSGSGGFVVYSDASHQGLGCVLMQ 372
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G V+AYASRQLKPYE+NYPT +S+LA VVF
Sbjct: 373 HGRVVAYASRQLKPYERNYPTHDSELADVVF 403
Score = 36.6 bits (83), Expect(2) = 3e-33
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRH+L+ CE+FT HKS
Sbjct: 405 LKIWRHFLFGETCEIFTDHKS 425
>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
Length = 596
Score = 131 bits (329), Expect(2) = 3e-33
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT KG+K +WS CE SFQELK +LV+ PI +P SG +V+YSDAS GLGCVLMQ
Sbjct: 121 LTKLTQKGVKFEWSDDCECSFQELKNKLVSAPILTIPSGSGGFVVYSDASHQGLGCVLMQ 180
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G V+AYASRQLKPYEKNYPT + +LAAVVF
Sbjct: 181 HGRVVAYASRQLKPYEKNYPTHDLELAAVVF 211
Score = 36.6 bits (83), Expect(2) = 3e-33
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRH+L+ CE+FT HKS
Sbjct: 213 LKIWRHFLFGETCEIFTDHKS 233
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 123 bits (309), Expect(2) = 1e-31
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT LT KG+K WS CE+SF ELK RL T P+ ALP +SG++VIYSDAS+ GLGCVLMQ
Sbjct: 519 LTYLTRKGVKFVWSDKCEESFIELKTRLTTAPVLALPDDSGNFVIYSDASQQGLGCVLMQ 578
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G VIAYASRQLK +E NYP + +LAAVVF
Sbjct: 579 HGRVIAYASRQLKKHELNYPVHDLELAAVVF 609
Score = 38.5 bits (88), Expect(2) = 1e-31
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY C++FT HKS
Sbjct: 611 LKIWRHYLYGETCQIFTDHKS 631
>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
Length = 2037
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT K +K +WS +CEKSF ELK+RL T P+ A+P SG Y +Y DAS+ GLGCVLMQ
Sbjct: 1746 LTKLTQKNVKFQWSEACEKSFLELKERLTTAPVLAVPSGSGGYTVYCDASRVGLGCVLMQ 1805
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G VIAYASRQLK +E+NYPT + ++ AV+F
Sbjct: 1806 HGKVIAYASRQLKKHEQNYPTHDLEMTAVIF 1836
Score = 39.7 bits (91), Expect(2) = 2e-31
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY CE+FT HKS
Sbjct: 1838 LKIWRHYLYGETCEIFTDHKS 1858
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 124 bits (311), Expect(2) = 6e-31
Identities = 60/91 (65%), Positives = 72/91 (79%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT KG WS +CE SFQ LKQ+LVT P+ +P SG++VIYSDASK GLGCVLMQ
Sbjct: 247 LTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 306
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G V+AYASRQLK +E+NYPT + +LAAVVF
Sbjct: 307 QGKVVAYASRQLKSHEQNYPTHDLELAAVVF 337
Score = 35.4 bits (80), Expect(2) = 6e-31
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY + ++FT HKS
Sbjct: 339 LKIWRHYLYGEKIQIFTDHKS 359
>gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 120 bits (302), Expect(2) = 8e-31
Identities = 59/91 (64%), Positives = 71/91 (78%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LTRLT K I +W+ CE+SFQELK+RL T P+ ALP +G++VIYSDAS GLGCVLMQ
Sbjct: 817 LTRLTRKDIAFEWTEECEQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQ 876
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
VIAYASRQLK +E+NYP + +LAAVVF
Sbjct: 877 HDRVIAYASRQLKKHEQNYPVHDLELAAVVF 907
Score = 38.5 bits (88), Expect(2) = 8e-31
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY C++FT HKS
Sbjct: 909 LKIWRHYLYGETCQIFTDHKS 929
>gb|EMJ12330.1| hypothetical protein PRUPE_ppa026240mg, partial [Prunus persica]
Length = 1008
Score = 120 bits (301), Expect(2) = 1e-30
Identities = 60/91 (65%), Positives = 69/91 (75%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT LT KG+K WS CE+SF ELK RL T P+ ALP +SG++VIYSDAS+ GL CVLM
Sbjct: 691 LTYLTRKGVKFVWSDKCEESFIELKTRLTTAPVLALPNDSGNFVIYSDASQQGLECVLMH 750
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G VIAYASRQLK +E NYP + KLAAVVF
Sbjct: 751 HGRVIAYASRQLKKHELNYPVHDLKLAAVVF 781
Score = 38.5 bits (88), Expect(2) = 1e-30
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY C++FT HKS
Sbjct: 783 LKIWRHYLYGETCQIFTDHKS 803
>emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera]
Length = 855
Score = 126 bits (317), Expect(2) = 1e-30
Identities = 60/91 (65%), Positives = 72/91 (79%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LTRLT KG+K +WS CE+SFQELK+RLVT PI +P SG +V+YSDAS G GCVLMQ
Sbjct: 249 LTRLTQKGVKFEWSNDCERSFQELKKRLVTAPILTIPSXSGGFVVYSDASHQGWGCVLMQ 308
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
V+A AS+QLKPYE+NYPT + +LAAVVF
Sbjct: 309 HXKVVACASKQLKPYERNYPTHDLELAAVVF 339
Score = 32.3 bits (72), Expect(2) = 1e-30
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRH+L+ E+FT HKS
Sbjct: 341 LKIWRHFLFGETYEIFTDHKS 361
>emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera]
Length = 1132
Score = 127 bits (318), Expect(2) = 1e-30
Identities = 62/91 (68%), Positives = 70/91 (76%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LTRLT KGIK +WS CE SFQELK +LVTTPI +P SG +++YSDAS+ GLGCVLMQ
Sbjct: 669 LTRLTQKGIKFEWSNDCEISFQELKNKLVTTPILTIPSSSGGFMVYSDASRQGLGCVLMQ 728
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
VIAYA RQLKPYE NYPT KLA +VF
Sbjct: 729 HEKVIAYAFRQLKPYEPNYPTYELKLAVMVF 759
Score = 31.6 bits (70), Expect(2) = 1e-30
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +2
Query: 278 LKIWRHYLY*AQ-CEVFTYHKS 340
LKIWR + + + CE+FTYHKS
Sbjct: 761 LKIWRLFFFFCETCEIFTYHKS 782
>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 121 bits (304), Expect(2) = 2e-30
Identities = 57/91 (62%), Positives = 72/91 (79%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+T LTHK +K +W+ CE SFQ+LKQRLVT P+ LP+ + +YSDAS+ GLGCVLMQ
Sbjct: 439 MTMLTHKDVKFQWTDQCECSFQQLKQRLVTAPVLTLPQPGKRFTVYSDASRVGLGCVLMQ 498
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
+G VIAYASRQLK +E+NYPT + +LAAVVF
Sbjct: 499 EGNVIAYASRQLKKHEQNYPTHDLELAAVVF 529
Score = 36.6 bits (83), Expect(2) = 2e-30
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY C++ T HKS
Sbjct: 531 LKIWRHYLYGESCDILTDHKS 551
>gb|EMJ02309.1| hypothetical protein PRUPE_ppa024392mg [Prunus persica]
Length = 1363
Score = 115 bits (289), Expect(2) = 4e-30
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +3
Query: 6 TRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQD 185
T LT KG++ +WS CE+SF ELK +L T P+ ALP +SG++VIYSDAS+ GLGCV MQ
Sbjct: 760 TYLTRKGVRFEWSDKCEESFNELKTKLTTAPVLALPDDSGNFVIYSDASQQGLGCVRMQH 819
Query: 186 G*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
G VIAYASRQLK +E NY + +LAAVVF
Sbjct: 820 GRVIAYASRQLKKHELNYLVHDLELAAVVF 849
Score = 41.2 bits (95), Expect(2) = 4e-30
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY C++FTYHK+
Sbjct: 851 LKIWRHYLYGETCQIFTYHKT 871
>gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|31430586|gb|AAP52480.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1473
Score = 122 bits (305), Expect(2) = 5e-30
Identities = 59/90 (65%), Positives = 69/90 (76%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+TRL K +K KWS CE+SFQELK RLV+ PI LP + +Y DASK GLGCVLMQ
Sbjct: 790 MTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKKGFQVYCDASKLGLGCVLMQ 849
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
DG V+AYASRQL+P+EKNYPT + KLAAVV
Sbjct: 850 DGKVVAYASRQLRPHEKNYPTHDLKLAAVV 879
Score = 34.7 bits (78), Expect(2) = 5e-30
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYL+ + EV+T HKS
Sbjct: 882 LKIWRHYLFGTRTEVYTDHKS 902
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 120 bits (302), Expect(2) = 7e-30
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT K +KL+WS +CEKSFQELK+RL T P+ LP+ + +V++ DAS+ GLGCVLMQ
Sbjct: 694 LTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQ 753
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
+ VIAYASRQLK +EKNYPT + +LAAVVF
Sbjct: 754 NDKVIAYASRQLKAHEKNYPTHDLELAAVVF 784
Score = 120 bits (302), Expect(2) = 7e-30
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT K +KL+WS +CEKSFQELK+RL T P+ LP+ + +V++ DAS+ GLGCVLMQ
Sbjct: 2204 LTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQ 2263
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
+ VIAYASRQLK +EKNYPT + +LAAVVF
Sbjct: 2264 NDKVIAYASRQLKAHEKNYPTHDLELAAVVF 2294
Score = 120 bits (302), Expect(2) = 7e-30
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LT+LT K +KL+WS +CEKSFQELK+RL T P+ LP+ + +V++ DAS+ GLGCVLMQ
Sbjct: 3714 LTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQ 3773
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
+ VIAYASRQLK +EKNYPT + +LAAVVF
Sbjct: 3774 NDKVIAYASRQLKAHEKNYPTHDLELAAVVF 3804
Score = 35.4 bits (80), Expect(2) = 7e-30
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY ++FT HKS
Sbjct: 786 LKIWRHYLYGVHVDIFTDHKS 806
Score = 35.4 bits (80), Expect(2) = 7e-30
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY ++FT HKS
Sbjct: 2296 LKIWRHYLYGVHVDIFTDHKS 2316
Score = 35.4 bits (80), Expect(2) = 7e-30
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY ++FT HKS
Sbjct: 3806 LKIWRHYLYGVHVDIFTDHKS 3826
>gb|EOY31685.1| Uncharacterized protein TCM_038736 [Theobroma cacao]
Length = 1486
Score = 119 bits (298), Expect(2) = 7e-30
Identities = 58/91 (63%), Positives = 68/91 (74%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
LTRLT KG+K +W CE FQELK RL + P+ LP ++V+YSDASK GLGCVLMQ
Sbjct: 845 LTRLTRKGVKYEWDDVCENRFQELKNRLTSAPVLTLPVSGKEFVVYSDASKLGLGCVLMQ 904
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVVF 275
D VIAYASRQLK +E NYPT + +LAAVVF
Sbjct: 905 DEKVIAYASRQLKKHETNYPTHDLELAAVVF 935
Score = 37.0 bits (84), Expect(2) = 7e-30
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY +C +F+ HKS
Sbjct: 937 LKIWRHYLYGERCRIFSDHKS 957
>emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group]
Length = 1138
Score = 121 bits (304), Expect(2) = 7e-30
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+TRL K +K KWS CE+SFQELK RL+T PI LP + +Y DASK GLGCVLMQ
Sbjct: 455 MTRLLQKDVKYKWSEECEQSFQELKNRLITAPILILPDPKKGFQVYCDASKLGLGCVLMQ 514
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
DG V+AYASRQL+P+EKNYPT + +LAAVV
Sbjct: 515 DGKVVAYASRQLRPHEKNYPTHDLELAAVV 544
Score = 34.7 bits (78), Expect(2) = 7e-30
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYL+ + EV+T HKS
Sbjct: 547 LKIWRHYLFGTRTEVYTDHKS 567
>gb|ABA93015.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1261
Score = 121 bits (303), Expect(2) = 9e-30
Identities = 57/90 (63%), Positives = 69/90 (76%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+TRL K +K KWS CE+SFQELK RL++ PI LP D+ +Y D SK GLGCVLMQ
Sbjct: 704 MTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKDFQVYCDVSKLGLGCVLMQ 763
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
DG V+AYASRQL+P+EKNYPT + +LAAVV
Sbjct: 764 DGKVVAYASRQLRPHEKNYPTPDLELAAVV 793
Score = 34.7 bits (78), Expect(2) = 9e-30
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYL+ + EV+T HKS
Sbjct: 796 LKIWRHYLFGTRTEVYTDHKS 816
>gb|ABA97045.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1474
Score = 120 bits (302), Expect(2) = 1e-29
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3
Query: 6 TRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQD 185
TRL K +K KWS CE+SFQELK RL++ PI LP + +Y DASK+GLGCVLMQD
Sbjct: 792 TRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYCDASKHGLGCVLMQD 851
Query: 186 G*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
G V+AYASRQL+P+EKNYPT + +LAAVV
Sbjct: 852 GKVVAYASRQLRPHEKNYPTHDLELAAVV 880
Score = 34.7 bits (78), Expect(2) = 1e-29
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYL+ + EV+T HKS
Sbjct: 883 LKIWRHYLFGTRTEVYTDHKS 903
>gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1473
Score = 120 bits (302), Expect(2) = 1e-29
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+TRL K +K KWS CE+SFQELK RLV+ PI LP + +Y DASK GLGCVLMQ
Sbjct: 790 MTRLLQKDVKYKWSEECEQSFQELKSRLVSAPILILPNPKKGFQVYCDASKLGLGCVLMQ 849
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
DG V+AYASRQL+P+EKNYPT + +LAAVV
Sbjct: 850 DGKVVAYASRQLRPHEKNYPTHDLELAAVV 879
Score = 34.7 bits (78), Expect(2) = 1e-29
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYL+ + EV+T HKS
Sbjct: 882 LKIWRHYLFGTRTEVYTDHKS 902
>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
Length = 1433
Score = 120 bits (302), Expect(2) = 1e-29
Identities = 55/90 (61%), Positives = 71/90 (78%)
Frame = +3
Query: 3 LTRLTHKGIKLKWSPSCEKSFQELKQRLVTTPIFALPKESGDYVIYSDASKNGLGCVLMQ 182
+TRL K +K KW+ CE+SFQELK+RLVT P+ LP D+ +Y DAS++GLGCVLMQ
Sbjct: 798 MTRLLQKDVKYKWTEDCERSFQELKKRLVTAPVLILPDSRKDFQVYCDASRHGLGCVLMQ 857
Query: 183 DG*VIAYASRQLKPYEKNYPTDNSKLAAVV 272
+G V+AYASRQL+P+E NYPT + +LAAVV
Sbjct: 858 EGKVVAYASRQLRPHENNYPTHDLELAAVV 887
Score = 34.7 bits (78), Expect(2) = 1e-29
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 278 LKIWRHYLY*AQCEVFTYHKS 340
LKIWRHYLY E++T HKS
Sbjct: 890 LKIWRHYLYGNHTEIYTDHKS 910