BLASTX nr result
ID: Catharanthus22_contig00040663
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00040663 (817 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex... 65 4e-08 ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex... 65 4e-08 ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/... 63 1e-07 >ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like isoform X2 [Solanum tuberosum] Length = 374 Score = 64.7 bits (156), Expect = 4e-08 Identities = 31/68 (45%), Positives = 45/68 (66%) Frame = -2 Query: 483 GFIRIRXXXXXXXXXLVKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHR 304 G+ R++ +++ + +F K KRIRSRLKIH F+RFR++WLTFP FSS T+Y + Sbjct: 305 GYKRMKKLVKFTKFKIIRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRK 364 Query: 303 LN*FMFLQ 280 L + LQ Sbjct: 365 LEKDISLQ 372 >ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like isoform X1 [Solanum tuberosum] Length = 375 Score = 64.7 bits (156), Expect = 4e-08 Identities = 31/68 (45%), Positives = 45/68 (66%) Frame = -2 Query: 483 GFIRIRXXXXXXXXXLVKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHR 304 G+ R++ +++ + +F K KRIRSRLKIH F+RFR++WLTFP FSS T+Y + Sbjct: 306 GYKRMKKLVKFTKFKIIRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRK 365 Query: 303 LN*FMFLQ 280 L + LQ Sbjct: 366 LEKDISLQ 373 >ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/3 complex subunit 2-like [Solanum lycopersicum] Length = 372 Score = 63.2 bits (152), Expect = 1e-07 Identities = 29/52 (55%), Positives = 39/52 (75%) Frame = -2 Query: 435 VKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHRLN*FMFLQ 280 ++ + +F K KRIRSRLKIH F+RFR++WLTFP FSS T+Y +L + LQ Sbjct: 319 IRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRKLEKDISLQ 370