BLASTX nr result

ID: Catharanthus22_contig00040663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040663
         (817 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex...    65   4e-08
ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex...    65   4e-08
ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/...    63   1e-07

>ref|XP_006354444.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
           isoform X2 [Solanum tuberosum]
          Length = 374

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = -2

Query: 483 GFIRIRXXXXXXXXXLVKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHR 304
           G+ R++         +++ + +F  K KRIRSRLKIH F+RFR++WLTFP FSS T+Y +
Sbjct: 305 GYKRMKKLVKFTKFKIIRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRK 364

Query: 303 LN*FMFLQ 280
           L   + LQ
Sbjct: 365 LEKDISLQ 372


>ref|XP_006354443.1| PREDICTED: actin-related protein 2/3 complex subunit 2B-like
           isoform X1 [Solanum tuberosum]
          Length = 375

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = -2

Query: 483 GFIRIRXXXXXXXXXLVKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHR 304
           G+ R++         +++ + +F  K KRIRSRLKIH F+RFR++WLTFP FSS T+Y +
Sbjct: 306 GYKRMKKLVKFTKFKIIRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRK 365

Query: 303 LN*FMFLQ 280
           L   + LQ
Sbjct: 366 LEKDISLQ 373


>ref|XP_004247762.1| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Solanum lycopersicum]
          Length = 372

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -2

Query: 435 VKQKHNFIRKAKRIRSRLKIHWFSRFRKRWLTFPKFSSPTRYHRLN*FMFLQ 280
           ++ + +F  K KRIRSRLKIH F+RFR++WLTFP FSS T+Y +L   + LQ
Sbjct: 319 IRYRSDFTSKLKRIRSRLKIHGFNRFRRKWLTFPIFSSKTKYRKLEKDISLQ 370


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