BLASTX nr result

ID: Catharanthus22_contig00040427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040427
         (241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol...    64   2e-08
ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Cit...    57   2e-06
ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citr...    57   2e-06
ref|XP_006421515.1| hypothetical protein CICLE_v10006870mg [Citr...    55   7e-06

>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
          Length = 403

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = -1

Query: 229 DDDGFLVLQIPG--KAIRYNLGRKTFEKLCDFEGADEEEEHHLRYTEYDFGYQHIESLCC 56
           ++D FLVL IPG  KA+RYN+  KTFEKLCD+EGADE+         +   +++IESLCC
Sbjct: 350 EEDAFLVLAIPGDCKAMRYNIIEKTFEKLCDYEGADEQ-------VYFLNAFEYIESLCC 402

Query: 55  V 53
           V
Sbjct: 403 V 403


>ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
          Length = 416

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -1

Query: 238 DEDDDDGFLVLQIPGKAIRYNLGRKTFEKLCDF--EGADEEEEHHLRYTEYDFGYQHIES 65
           +E+DDD +LVL +P KA+RYNL  +TF+KL D    G   E+E  L++  +D  +Q+ ES
Sbjct: 354 EENDDDSYLVLHLPKKAVRYNLKDRTFKKLHDVAPAGNQAEDESALQFRWFD-AFQYTES 412

Query: 64  LCCV 53
           L CV
Sbjct: 413 LACV 416


>ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citrus clementina]
           gi|557523416|gb|ESR34783.1| hypothetical protein
           CICLE_v10005096mg [Citrus clementina]
          Length = 403

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -1

Query: 238 DEDDDDGFLVLQIPGKAIRYNLGRKTFEKLCDF--EGADEEEEHHLRYTEYDFGYQHIES 65
           +E+DDD +LVL +P KA+RYNL  +TF+KL D    G   E+E  L++  +D  +Q+ ES
Sbjct: 341 EENDDDSYLVLHLPKKAVRYNLKDRTFKKLHDVAPAGNQAEDESALQFRWFD-AFQYTES 399

Query: 64  LCCV 53
           L CV
Sbjct: 400 LACV 403


>ref|XP_006421515.1| hypothetical protein CICLE_v10006870mg [Citrus clementina]
           gi|557523388|gb|ESR34755.1| hypothetical protein
           CICLE_v10006870mg [Citrus clementina]
          Length = 304

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -1

Query: 232 DDDDGFLVLQIPGKAIRYNLGRKTFEKLCDFE--GADEEEEHHLRYTEYDFGYQHIESLC 59
           +D +  +VL IPGKAIRYNL   +F+K+C+F+   AD    H     ++ +G+Q+IE+L 
Sbjct: 243 NDAESCMVLYIPGKAIRYNLKDMSFDKICEFDPGRADIASPHSEGSLKFFYGFQYIETLA 302

Query: 58  CV 53
           CV
Sbjct: 303 CV 304


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