BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040418
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat...    86   8e-15
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...    84   5e-14
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]    84   5e-14
ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citr...    82   1e-13
gb|ESW14767.1| hypothetical protein PHAVU_007G015700g [Phaseolus...    81   2e-13
ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Popu...    81   2e-13
ref|XP_006605847.1| PREDICTED: putative pentatricopeptide repeat...    80   6e-13
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,...    80   7e-13
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...    79   9e-13
gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily p...    78   3e-12
ref|XP_004497230.1| PREDICTED: uncharacterized protein LOC101514...    76   1e-11
ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat...    74   3e-11
ref|XP_003592708.1| Pentatricopeptide repeat protein-like protei...    74   4e-11
ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Caps...    73   9e-11
ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat...    72   2e-10
ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutr...    70   4e-10
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar...    68   2e-09
ref|XP_006836716.1| hypothetical protein AMTR_s00088p00119450 [A...    63   7e-08
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp....    62   2e-07
emb|CAC08331.1| putative protein [Arabidopsis thaliana]                61   3e-07

>ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Citrus sinensis]
          Length = 845

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 44/95 (46%), Positives = 61/95 (64%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC+    ALV+ +MM+E+ M PD F++VAL+ AFLS  N   A EVL++M   G FPD  
Sbjct: 732  KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEMVDEGNFPDPL 791

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPT 380
            DKN+L++  AI  L ED  T+  +KNL+ +   PT
Sbjct: 792  DKNYLVVRDAILKLSEDTRTARPVKNLIKEGSIPT 826


>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial [Vitis vinifera]
            gi|296085293|emb|CBI29025.3| unnamed protein product
            [Vitis vinifera]
          Length = 854

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 47/103 (45%), Positives = 61/103 (59%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC     AL+Y + M ERE  PD  +YVAL+ +F+SN N   A E+L++M   G FPD  
Sbjct: 749  KCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPL 807

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPTHVVT*EFG 356
            DKN L +  AI  L ED  TS N+KNL+A+   PT V   + G
Sbjct: 808  DKNDLPLRDAILELAEDASTSSNVKNLIAEGRIPTIVCLSDVG 850


>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 47/103 (45%), Positives = 61/103 (59%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC     AL+Y + M ERE  PD  +YVAL+ +F+SN N   A E+L++M   G FPD  
Sbjct: 709  KCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPL 767

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPTHVVT*EFG 356
            DKN L +  AI  L ED  TS N+KNL+A+   PT V   + G
Sbjct: 768  DKNDLPLRDAILELAEDASTSSNVKNLIAEGRIPTIVCLSDVG 810


>ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citrus clementina]
            gi|557539808|gb|ESR50852.1| hypothetical protein
            CICLE_v10030697mg [Citrus clementina]
          Length = 845

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC+    ALV+ +MM+E+ M PD F++VAL+ AFLS  N   A EVL++M   G FPD  
Sbjct: 732  KCDRPGAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEMVDEGNFPDPL 791

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPT 380
            DKN+L++  AI  L ED  T+  +K L+ +   PT
Sbjct: 792  DKNYLVVRDAILKLSEDTRTARPVKILIKEGSIPT 826


>gb|ESW14767.1| hypothetical protein PHAVU_007G015700g [Phaseolus vulgaris]
          Length = 844

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 42/95 (44%), Positives = 61/95 (64%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KCN    AL YL+ ME REM PD+FIY+AL+ AFLS+ N  +A E+ ++M  +G FP S+
Sbjct: 746  KCNRPTAALQYLREMEHREMKPDSFIYIALLSAFLSDMNLASAFEIFKEMVYSGFFPKSH 805

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPT 380
            DK++ I+  AI    +D  TS  ++ L+ +   PT
Sbjct: 806  DKSYPIVMDAIDKFSKDHRTSSGIQVLMEEGKLPT 840


>ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Populus trichocarpa]
           gi|550338460|gb|EEE94156.2| hypothetical protein
           POPTR_0005s09280g [Populus trichocarpa]
          Length = 835

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 39/76 (51%), Positives = 52/76 (68%)
 Frame = -3

Query: 661 CNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSND 482
           C   ++ALVYL+ MEEREM PD ++YV L+ AFL +SNQ  A E+L++M   G FPD +D
Sbjct: 725 CGRPNEALVYLREMEEREMKPDTYVYVGLLSAFLVDSNQPLAFEILQEMVDKGKFPDLHD 784

Query: 481 KNHLIITKAISVLLED 434
           KNH+ +  AI    ED
Sbjct: 785 KNHISVRNAILKFSED 800


>ref|XP_006605847.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Glycine max]
          Length = 821

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 39/96 (40%), Positives = 63/96 (65%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC     AL YL+ ME+++M PD+FIY+AL+ +FLS+ +  +A E+ ++M  +G FP+S+
Sbjct: 724  KCCRPTTALHYLREMEQKDMKPDSFIYIALISSFLSDMDLASAFEIFKEMVYSGYFPESH 783

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPTH 377
            DKN+ I+  AI    +D  TS  ++ L+ +   PTH
Sbjct: 784  DKNYSIVMDAIDKFSKDHRTSSGIQVLMEEGKLPTH 819


>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 42/95 (44%), Positives = 59/95 (62%)
 Frame = -3

Query: 664 KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
           KC+    AL++   MEE EM PD ++Y++LV AF++ SN   A E+L+KM     FPD  
Sbjct: 523 KCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRNFPDPL 582

Query: 484 DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPT 380
           DKN +II  AI  L +D  TS ++K+L+A    PT
Sbjct: 583 DKNCIIIRDAILKLSKDARTSSSVKSLIASGSIPT 617


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Cucumis sativus]
            gi|449510601|ref|XP_004163711.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein At5g08310,
            mitochondrial-like [Cucumis sativus]
          Length = 849

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 40/95 (42%), Positives = 57/95 (60%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC    +ALVY   MEE+EM PD+++ VAL+DAF+S  N   A  +L++  + G  PD  
Sbjct: 747  KCGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPT 806

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPT 380
            DKN++ I  AI  L +D  T L +K L+ +   PT
Sbjct: 807  DKNYVTIKDAIFKLSKDEQTGLEVKALIEKGRIPT 841


>gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 850

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC  +  ALV+   M+E+ M PD+++Y+AL+ AFLS++N  +  ++L++M   G  PD  
Sbjct: 746  KCGRSSAALVHFNEMKEKNMKPDSYVYIALISAFLSDTNLPSVFDMLKEMVDGGNLPDPL 805

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFP 383
            DKN LII  AI  L ED  T  ++K+L+A+   P
Sbjct: 806  DKNFLIIRDAICKLSEDARTFSSIKDLIAEGRIP 839


>ref|XP_004497230.1| PREDICTED: uncharacterized protein LOC101514261 [Cicer arietinum]
          Length = 1625

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 41/103 (39%), Positives = 60/103 (58%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            +C    +AL YL+ ME++EM PDAFIY+AL+ A+LS+ N  +A E+  +M   G FP   
Sbjct: 712  RCCRPTEALCYLREMEQKEMKPDAFIYIALLSAYLSDMNLTSAFEIFREMVDLGYFPKPL 771

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPTHVVT*EFG 356
            DKN+ I   A     +D  TS +++ L+ +   PTH    E G
Sbjct: 772  DKNYPIAVDATLKFCKDHRTSSSIQVLMEEGKIPTHCELLELG 814


>ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like isoform X1 [Solanum
            tuberosum] gi|565387018|ref|XP_006359302.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like isoform X2 [Solanum
            tuberosum] gi|565387020|ref|XP_006359303.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like isoform X3 [Solanum
            tuberosum]
          Length = 852

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC    DAL+YLQ ME ++M PD  IY+ L+DAF+ N N   A ++L+K+  +    D N
Sbjct: 750  KCRKPDDALIYLQEMERKDMKPDPSIYIVLIDAFIKNMNPNEACDLLQKVVHDESLRDLN 809

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQ 395
             K+  I+ +AI  L  DP TS N+K L+ +
Sbjct: 810  SKSRPILKEAILSLSADPRTSSNLKILLEE 839


>ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
            gi|355481756|gb|AES62959.1| Pentatricopeptide repeat
            protein-like protein [Medicago truncatula]
          Length = 1430

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 38/96 (39%), Positives = 57/96 (59%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC    +AL YL+ M+++EM PD+FIYVAL+ A+LS+ N  +A E+  +M   G FP   
Sbjct: 718  KCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFPKPL 777

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFPTH 377
            DKN+  +  AI    +D  TS  ++ L+ +   P H
Sbjct: 778  DKNYPTVVDAILKFCKDDRTSSGIQVLIEEGKLPMH 813


>ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Capsella rubella]
            gi|482555155|gb|EOA19347.1| hypothetical protein
            CARUB_v10000227mg [Capsella rubella]
          Length = 830

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC  + +AL+Y + MEE+EM PD+ +Y++LV +FLS+ N  A   +  +M   G FP S 
Sbjct: 729  KCGWSSEALIYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVNEGRFPVSV 788

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFP 383
            D+N+L+   A +  ++D  TS  +  L+    FP
Sbjct: 789  DRNYLLAVDATNKFVDDSKTSCYLTGLIKNGRFP 822


>ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Solanum lycopersicum]
          Length = 852

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC    DAL+YLQ ME ++M PD  IY+ L+DAF+ N N   A E+L+K+  +    D N
Sbjct: 750  KCRKPDDALIYLQEMERKDMKPDPSIYIVLIDAFIKNMNPNEACELLQKVVHDESLLDLN 809

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQ 395
             K+  I+ +AI  L  DP TS ++K L+ +
Sbjct: 810  IKSRPILKEAIRSLSADPRTSSHVKILLEE 839


>ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutrema salsugineum]
            gi|557100411|gb|ESQ40774.1| hypothetical protein
            EUTSA_v10015588mg [Eutrema salsugineum]
          Length = 829

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 35/94 (37%), Positives = 55/94 (58%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC  + +A+VY + MEE+EM PD+ +Y++LV + LS+ N  A   +  +M   G FP S 
Sbjct: 728  KCGWSSEAMVYFREMEEKEMEPDSAVYLSLVSSLLSSENVSAGFGIFREMVHKGRFPVSV 787

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFP 383
            D+N+L+   A +  +ED  TS  +  L+    FP
Sbjct: 788  DRNYLLAVDATNKFVEDYRTSCYLTGLIKDGRFP 821


>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial; Flags: Precursor
            gi|332003898|gb|AED91281.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 832

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 35/94 (37%), Positives = 54/94 (57%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC  + +ALVY + MEE+EM PD+ +Y++LV +FLS+ N  A   +  +M   G FP S 
Sbjct: 731  KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFP 383
            D+N+++     S  +ED  TS  +  L+     P
Sbjct: 791  DRNYMLAVNVTSKFVEDLRTSCYLTCLIKDGRIP 824


>ref|XP_006836716.1| hypothetical protein AMTR_s00088p00119450 [Amborella trichopoda]
            gi|548839276|gb|ERM99569.1| hypothetical protein
            AMTR_s00088p00119450 [Amborella trichopoda]
          Length = 858

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 31/94 (32%), Positives = 53/94 (56%)
 Frame = -3

Query: 664  KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
            KC  A  AL Y   ME +   PDAFIYVAL+D+ +S ++  +A  +L +M + G  P  +
Sbjct: 750  KCGRASTALQYFHEMEAKAFDPDAFIYVALIDSLVSIADMFSAFRILREMIRKGKCPSPS 809

Query: 484  DKNHLIITKAISVLLEDPMTSLNMKNLVAQDCFP 383
            DK++ ++ +++  + ED   S ++  L+     P
Sbjct: 810  DKHYALLLESLCKMYEDKHISSDVNALIEDGGIP 843


>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319188|gb|EFH49610.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1281

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = -3

Query: 661 CNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSND 482
           C  + +ALVY + MEE+EM PD+ +Y++LV +FLS+ N  A   +  +M   G FP S D
Sbjct: 732 CGWSSEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVD 791

Query: 481 KNHLIITKAIS 449
           +N+L+   A S
Sbjct: 792 RNYLLAVDATS 802


>emb|CAC08331.1| putative protein [Arabidopsis thaliana]
          Length = 1280

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = -3

Query: 664 KCNLAHDALVYLQMMEEREMLPDAFIYVALVDAFLSNSNQIAALEVLEKMHKNGIFPDSN 485
           KC  + +ALVY + MEE+EM PD+ +Y++LV +FLS+ N  A   +  +M   G FP S 
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790

Query: 484 DKNHLIITKAIS 449
           D+N+++     S
Sbjct: 791 DRNYMLAVNVTS 802