BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040375
         (506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   105   8e-21
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   100   2e-19
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    99   6e-19
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    99   6e-19
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    99   6e-19
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]    99   8e-19
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    99   8e-19
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    99   8e-19
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    98   1e-18
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    97   2e-18
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 97   2e-18
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    97   2e-18
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    97   3e-18
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    97   3e-18
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    96   4e-18
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]    96   5e-18
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    96   5e-18
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    93   3e-17
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    93   3e-17
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    91   2e-16

>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  105 bits (261), Expect = 8e-21
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = -1

Query: 506 LFNRPYSFFFVLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFL 327
           L N   S F  L+GKTP+E+L+ + P Y H+  FGC  Y H     KDKF SR RKC+F+
Sbjct: 517 LINXTPSVF--LDGKTPYEILYGQAPSYKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFV 574

Query: 326 GYQYGKKGWKFFYLQTHEFITYRDVVFIENEFPF 225
           GY +GKKGW+ + L++ E+   R+V+F+E EF +
Sbjct: 575 GYPFGKKGWRLYDLESGEYFVSRBVIFVEAEFSY 608


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  100 bits (250), Expect = 2e-19
 Identities = 43/84 (51%), Positives = 56/84 (66%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L GK+P+E+LF   P YS L+ FGC  Y H     KDKF  R R+CVF+GY YGKKGW+
Sbjct: 705 ILHGKSPYEVLFGSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWR 764

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            + L+ ++F   RDVVF E  FP+
Sbjct: 765 LYDLEKNKFFVSRDVVFQETVFPY 788


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/84 (53%), Positives = 53/84 (63%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L  KTPFE+LF   P Y+ +  FGC ++ H      DKF SR RKCVFLGY +GKKGWK
Sbjct: 381 LLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWK 440

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            F L T E    RDV F E+ FPF
Sbjct: 441 LFDLDTKELFVSRDVKFFEDVFPF 464


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/84 (53%), Positives = 53/84 (63%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L  KTPFE+LF   P Y+ +  FGC ++ H      DKF SR RKCVFLGY +GKKGWK
Sbjct: 714 LLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWK 773

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            F L T E    RDV F E+ FPF
Sbjct: 774 LFDLDTKELFVSRDVKFFEDVFPF 797


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/84 (53%), Positives = 53/84 (63%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L  KTPFE+LF   P Y+ +  FGC ++ H      DKF SR RKCVFLGY +GKKGWK
Sbjct: 467 LLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWK 526

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            F L T E    RDV F E+ FPF
Sbjct: 527 LFDLDTKELFVSRDVKFFEDVFPF 550


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 45/84 (53%), Positives = 53/84 (63%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L  KTPFE+LF   P Y+ +  FGC ++ H      DKF SR RKCVFLGY +GKKGWK
Sbjct: 426 LLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWK 485

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            F L T E    RDV F E+ FPF
Sbjct: 486 LFDLDTKELFVSRDVKFFEDVFPF 509


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/94 (46%), Positives = 61/94 (64%)
 Frame = -1

Query: 506 LFNRPYSFFFVLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFL 327
           L NR  S   +L+GK+P+E+L+   P YSHL+ FG   Y H      DKF +R R+CVF+
Sbjct: 484 LINRTPSM--LLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFV 541

Query: 326 GYQYGKKGWKFFYLQTHEFITYRDVVFIENEFPF 225
           GY +G+KGW+ F L+  +F   RDV+F E EFP+
Sbjct: 542 GYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/94 (46%), Positives = 61/94 (64%)
 Frame = -1

Query: 506 LFNRPYSFFFVLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFL 327
           L NR  S   +L+GK+P+E+L+   P YSHL+ FG   Y H      DKF +R R+CVF+
Sbjct: 708 LINRTPSM--LLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFV 765

Query: 326 GYQYGKKGWKFFYLQTHEFITYRDVVFIENEFPF 225
           GY +G+KGW+ F L+  +F   RDV+F E EFP+
Sbjct: 766 GYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 799


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 44/84 (52%), Positives = 53/84 (63%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L+GKTP+E+LF + P Y HL+ FG   Y HK     DKF  R R+C F GY YGKKGWK
Sbjct: 591 ILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWK 650

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
              L+T E    RDV+F E  FPF
Sbjct: 651 LXDLETKEQFESRDVIFHETIFPF 674


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 44/94 (46%), Positives = 61/94 (64%)
 Frame = -1

Query: 506 LFNRPYSFFFVLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFL 327
           L NR  S   +L+GK+P+E+L+   P YSHL+ FG   Y H      DKF +R R+CVF+
Sbjct: 484 LINRTPSM--LLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFV 541

Query: 326 GYQYGKKGWKFFYLQTHEFITYRDVVFIENEFPF 225
           GY +G+KGW+ F L+  +F   RDV+F E EFP+
Sbjct: 542 GYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L GKTP+E+LF K P Y  LK FGC  + H     KDKF S+ R+C+FLGY +GKKGW+
Sbjct: 543 ILNGKTPYEVLFGKEPSYKPLKVFGCICFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWR 602

Query: 296 FFYLQTHEFITYRDVVFIENEFPFLIS 216
            + L+T +    RDV F E  FP+  S
Sbjct: 603 VYDLETGDLYVSRDVTFDEKIFPYASS 629


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/93 (48%), Positives = 57/93 (61%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           VL   TP+E L  K P + HL+ FG   Y H      DKF  R R+CVF+GY +G+KGW+
Sbjct: 592 VLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWR 651

Query: 296 FFYLQTHEFITYRDVVFIENEFPFLISKSREVL 198
            F L+ +EF   RDVVF E EFPF IS  + V+
Sbjct: 652 LFDLEQNEFFVSRDVVFSELEFPFRISHEQNVI 684


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/113 (42%), Positives = 65/113 (57%)
 Frame = -1

Query: 467 GKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWKFFY 288
           G +P+E+L N  P Y HL+ FG   YVH+    KDKF  R R CVF+GY + +KGWK F 
Sbjct: 293 GLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFD 352

Query: 287 LQTHEFITYRDVVFIENEFPFLISKSREVL*TKNNLSCDFSEIPETRTATRGS 129
           ++  EF+  RDVVF E+ FP+  + +  V  +   L  D   +  T T  RGS
Sbjct: 353 MEKKEFLVSRDVVFREDVFPYAATNTDHVSASPAPLLVDEDWMVSTTTLDRGS 405


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 40/84 (47%), Positives = 57/84 (67%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L G+TP+E+L    P+YS L+ FG   YVH+    KDKF  R R C+F+GY +GKKGWK
Sbjct: 729 ILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWK 788

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            + ++ +EF+  RDV+F E  FP+
Sbjct: 789 VYDIERNEFLVSRDVIFREEVFPY 812


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/84 (51%), Positives = 55/84 (65%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L+GKTPFELL+N+ P  +H++ FGC  YVH      DKF SR  K +FLGY + KKGW+
Sbjct: 670 LLQGKTPFELLYNRPPPVNHIRVFGCICYVHNQKHGGDKFESRSNKSIFLGYPFAKKGWR 729

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
            +  +T      RDVVF E EFPF
Sbjct: 730 VYNFETGVISVSRDVVFRETEFPF 753


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 44/84 (52%), Positives = 52/84 (61%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L  KTPFE+LF   P Y+ +  FGC ++ H      DKF SR RKCVFLGY +GKKGWK
Sbjct: 594 LLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWK 653

Query: 296 FFYLQTHEFITYRDVVFIENEFPF 225
              L T E    RDV F E+ FPF
Sbjct: 654 LXDLDTKELFVSRDVKFFEDVFPF 677


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 44/92 (47%), Positives = 59/92 (64%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           VL+GKTP+ELLF + P Y  L++FGC  Y H     KDKF SR RKCVF+GY +GKK W+
Sbjct: 702 VLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWR 761

Query: 296 FFYLQTHEFITYRDVVFIENEFPFLISKSREV 201
            + L+T +    RDV F E+ +P+  +    V
Sbjct: 762 VYDLETGKIFASRDVRFHEDIYPYATATQSNV 793


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 38/91 (41%), Positives = 64/91 (70%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L+GKTP+++L+++ P Y+ L+ FG   +  K+    DKF+ RGRKC+F+GY +G+KGW+
Sbjct: 716 ILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWR 775

Query: 296 FFYLQTHEFITYRDVVFIENEFPFLISKSRE 204
            + +++  F   RDVVF E+ FPF   K+++
Sbjct: 776 IYDIESQIFFVSRDVVFQEDIFPFADKKNKD 806


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = -1

Query: 476 VLEGKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWK 297
           +L+GKTPFEL++N+ P   H++ FGC  YVH      DKF SR  K +FLGY + KKGW+
Sbjct: 706 LLKGKTPFELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLGYPFAKKGWR 765

Query: 296 FFYLQTHEFITYRDVVFIENEFPFLIS 216
            + ++T      RDVVF E EF F IS
Sbjct: 766 VYNIETGVVSVSRDVVFRETEFHFPIS 792


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = -1

Query: 467  GKTPFELLFNKVPLYSHLKNFGCFAYVHKYGLPKDKFRSRGRKCVFLGYQYGKKGWKFFY 288
            G +P+ELL    P Y  L+ FG   Y H+    KDKF  R R C+F+GY +G+KGWK + 
Sbjct: 715  GLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYD 774

Query: 287  LQTHEFITYRDVVFIENEFPFLISKSREVL*TKNNLSCDFSE--IPETRTATRGS 129
            L T+EFI  RDVVF EN FP+  ++   +          + E  +P T    RGS
Sbjct: 775  LSTNEFIVSRDVVFRENVFPYATNEGDTIYTPPVTCPITYDEDWLPFTTLEDRGS 829