BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00040239
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364943.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus pe...   124   1e-26
ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containi...   118   7e-25
ref|XP_002522400.1| pentatricopeptide repeat-containing protein,...   117   2e-24
emb|CBI31981.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|NP_174012.1| pentatricopeptide repeat-containing protein [Ar...   113   2e-23
ref|XP_006415976.1| hypothetical protein EUTSA_v10009468mg [Eutr...   113   3e-23
gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protei...   112   4e-23
ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Caps...   111   1e-22
ref|XP_002890625.1| pentatricopeptide repeat-containing protein ...   110   1e-22
ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   100   3e-19
ref|XP_003593920.1| Pentatricopeptide repeat-containing protein ...    98   1e-18
ref|XP_006845985.1| hypothetical protein AMTR_s00155p00033200 [A...    96   4e-18
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p...    81   1e-13
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...    79   5e-13

>ref|XP_006364943.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Solanum tuberosum]
          Length = 591

 Score =  129 bits (323), Expect = 5e-28
 Identities = 57/99 (57%), Positives = 81/99 (81%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +Y  SIF+ +++PNLYMYNTMLR+YSISD+P++    FN++R Q+++LD+F FV +L+S 
Sbjct: 77  DYTSSIFKYVKSPNLYMYNTMLRSYSISDDPQKGLVFFNYMREQNVVLDQFAFVSVLRSC 136

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             +L  WTGL+VHS+VLRSGF LFL++ NTL++FYCV G
Sbjct: 137 MRLLEKWTGLAVHSVVLRSGFDLFLDLKNTLLNFYCVCG 175


>ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 544

 Score =  124 bits (312), Expect = 1e-26
 Identities = 54/99 (54%), Positives = 80/99 (80%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +Y  SIF+ +++PNLYMYNTMLR+YSISD+P++    FN++R Q ++LD+F FV +L+S 
Sbjct: 25  DYISSIFKYVKSPNLYMYNTMLRSYSISDDPQKGLVFFNYMREQCVVLDQFAFVSVLRSC 84

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             ++  WTG++VHS+VL+SGF LFL++ NTL++FYCV G
Sbjct: 85  IRLMEKWTGVAVHSVVLKSGFDLFLDLKNTLLNFYCVCG 123


>gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus persica]
          Length = 540

 Score =  124 bits (311), Expect = 1e-26
 Identities = 56/96 (58%), Positives = 75/96 (78%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF RIQNPNL+M+NTM+R YSISD+P   F +FN +R+Q+I LD+F+F+  LK+ A
Sbjct: 26  YAASIFNRIQNPNLFMFNTMVRGYSISDDPTHAFRVFNNLRAQNITLDQFSFITTLKACA 85

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCV 9
             LAI TG  +H +V+RSG  +F+NV NTL+HFYC+
Sbjct: 86  RELAIGTGQGIHGIVVRSGQGMFVNVKNTLLHFYCI 121


>ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 571

 Score =  118 bits (296), Expect = 7e-25
 Identities = 56/98 (57%), Positives = 74/98 (75%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF  IQNPNL+M+NT+LRAYSIS EP + F +FN +R++ I+LD+F+F+  LK+ A
Sbjct: 68  YAASIFSHIQNPNLFMFNTLLRAYSISGEPNKAFLVFNDLRARGIVLDQFSFITTLKACA 127

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             LAI TG  +H +V+RSG   F+ V NTL+HFYCV G
Sbjct: 128 RELAIETGQGIHGVVVRSGHGGFIGVKNTLLHFYCVSG 165


>ref|XP_002522400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538285|gb|EEF39892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 476

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF   QNPNL+MYNT+LR +SI D P+Q F +F  +R+Q I LD+F+F+ ILK+SA
Sbjct: 79  YAASIFNHTQNPNLFMYNTLLRGFSIGDNPKQAFAVFKNLRAQRIELDQFSFITILKASA 138

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             LA+  G  +H +V RSG+++F+NV NTL+H Y V G
Sbjct: 139 RELAVKAGQGIHGIVARSGYLMFVNVKNTLLHLYSVCG 176


>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/99 (54%), Positives = 73/99 (73%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +YA SIF +I +PNL+M+NTMLR YSIS  P+Q F +F  +R+Q ++LD+F+F+P LK+ 
Sbjct: 78  DYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQQMILDQFSFIPTLKAC 137

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           A  LA  TG  +H +V+RSG  LF NV N L+HFYCV G
Sbjct: 138 ARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCG 176


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/99 (54%), Positives = 73/99 (73%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +YA SIF +I +PNL+M+NTMLR YSIS  P+Q F +F  +R+Q ++LD+F+F+P LK+ 
Sbjct: 78  DYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQQMILDQFSFIPTLKAC 137

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           A  LA  TG  +H +V+RSG  LF NV N L+HFYCV G
Sbjct: 138 ARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCG 176


>ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26900, mitochondrial; Flags: Precursor
           gi|4262179|gb|AAD14496.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192635|gb|AEE30756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 572

 Score =  113 bits (283), Expect = 2e-23
 Identities = 50/98 (51%), Positives = 71/98 (72%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIFE + N NL+M+NTM+R YSISDEPE+ F +FN +R++ + LD F+F+  LKS +
Sbjct: 77  YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCS 136

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             L +  G  +H + LRSGF++F ++ N L+HFYCV G
Sbjct: 137 RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCG 174


>ref|XP_006415976.1| hypothetical protein EUTSA_v10009468mg [Eutrema salsugineum]
           gi|557093747|gb|ESQ34329.1| hypothetical protein
           EUTSA_v10009468mg [Eutrema salsugineum]
          Length = 580

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/98 (54%), Positives = 69/98 (70%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF  + N NLYM+NTMLR YS+SDEPE+ F +FN +R++ + LD F+F+  LKS A
Sbjct: 82  YASSIFGNVSNANLYMFNTMLRGYSMSDEPERAFRVFNQLRAKGLALDRFSFITTLKSCA 141

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             L    G  VH +VLRSGF+ F ++ N L+HFYCV G
Sbjct: 142 RELCSRIGEGVHGIVLRSGFMSFTDLRNALLHFYCVCG 179


>gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 592

 Score =  112 bits (281), Expect = 4e-23
 Identities = 53/99 (53%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQ-SILLDEFTFVPILKSS 120
           YA SI ++IQNPNL+MYN++LR YSISD+P Q F +FN +R++  ILLD+F+FV  LK+ 
Sbjct: 74  YAASIIKQIQNPNLFMYNSILRGYSISDDPNQAFSVFNNLRAKDGILLDQFSFVTTLKAC 133

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           +   AI+ G ++H L LRSG + F+NV N L+H Y V G
Sbjct: 134 SREFAIFNGQTIHGLALRSGHVFFINVKNALLHLYSVCG 172


>ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Capsella rubella]
           gi|482559527|gb|EOA23718.1| hypothetical protein
           CARUB_v10016929mg [Capsella rubella]
          Length = 575

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/98 (50%), Positives = 70/98 (71%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIFE + N NL+M+NT+LR YS+SDEPE+ F +FN +R++ + LD F+F+  LKS +
Sbjct: 77  YAASIFEHVSNTNLFMFNTVLRGYSMSDEPERAFRVFNQLRAKGLTLDRFSFITTLKSCS 136

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             L    G  +H + LRSGF++F ++ N L+HFYCV G
Sbjct: 137 RELCCSIGEGLHGIALRSGFMVFTDLRNALLHFYCVSG 174


>ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336467|gb|EFH66884.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 568

 Score =  110 bits (276), Expect = 1e-22
 Identities = 51/98 (52%), Positives = 69/98 (70%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIFE + N NLYM+NTM+R YSISDEPE+ F +FN +R++ I LD F+F+  LKS +
Sbjct: 73  YASSIFEHVSNTNLYMFNTMIRGYSISDEPERAFRVFNQLRAKGITLDRFSFITTLKSCS 132

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
             L    G  +H + LRSGF++F ++ N L+ FYCV G
Sbjct: 133 RDLCSSIGEGLHGIALRSGFMVFTDLRNALLQFYCVCG 170


>ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 556

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/94 (52%), Positives = 66/94 (70%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF  I+NPNL+M+NTMLR YS S++ +Q F +FN +R+Q  L D F+F+  LK+ A
Sbjct: 76  YAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLPDRFSFITTLKACA 135

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFY 15
             LAI  G  +H +V +SG  LF +VNN L+HFY
Sbjct: 136 RELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFY 169


>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/94 (52%), Positives = 66/94 (70%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSA 117
           YA SIF  I+NPNL+M+NTMLR YS S++ +Q F +FN +R+Q  L D F+F+  LK+ A
Sbjct: 76  YAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLPDRFSFITTLKACA 135

Query: 116 NMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFY 15
             LAI  G  +H +V +SG  LF +VNN L+HFY
Sbjct: 136 RELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFY 169


>ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g26900, mitochondrial-like [Cicer arietinum]
          Length = 580

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/97 (48%), Positives = 69/97 (71%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +YA SI   IQNPNL+M+NTMLR YSIS+   + F +FN +R++ I LD+F+FV +LK+ 
Sbjct: 76  DYASSICSYIQNPNLFMFNTMLRGYSISNFSNKAFPIFNELRNRGIELDQFSFVTVLKAC 135

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCV 9
              L +  G  +H + ++SG  +F++VNNTL+HFY V
Sbjct: 136 GRSLEVRFGQGIHGISVKSGNRMFVDVNNTLLHFYSV 172


>ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482968|gb|AES64171.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 801

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/99 (44%), Positives = 66/99 (66%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           NYA +IF  IQNPNL+MYNTMLR YS+S+   +   +FN +R+    LD F+F+ ++K+ 
Sbjct: 60  NYASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKAC 119

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
                +  G  VH +V++SG   F+++NNT++ FYCV G
Sbjct: 120 GRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCG 158


>ref|XP_006845985.1| hypothetical protein AMTR_s00155p00033200 [Amborella trichopoda]
           gi|548848741|gb|ERN07660.1| hypothetical protein
           AMTR_s00155p00033200 [Amborella trichopoda]
          Length = 204

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/93 (50%), Positives = 64/93 (68%)
 Frame = -2

Query: 293 AVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSSAN 114
           A SIF  I+NPNL+M+NTMLR  S+S+ PE+   LFN +R+Q ILLD+FT + ILKS A 
Sbjct: 23  AFSIFSCIRNPNLFMWNTMLRGISVSETPEKSLSLFNSMRAQGILLDQFTIICILKSCAK 82

Query: 113 MLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFY 15
              + TG  +H L+ ++GF  F+N  N L+H Y
Sbjct: 83  KANLETGQCIHGLLFKTGFGNFINPINALIHMY 115


>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
           trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
           protein AMTR_s01859p00006880, partial [Amborella
           trichopoda]
          Length = 190

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/99 (42%), Positives = 64/99 (64%)
 Frame = -2

Query: 299 NYAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELFNFVRSQSILLDEFTFVPILKSS 120
           +YA+ IFE+I  PNLYMYNT++RA++ S  PE    L+  +  Q+I  ++FTF  +LK+ 
Sbjct: 85  SYALKIFEQIPQPNLYMYNTIIRAHASSRSPENALLLYTEMLHQNIDPNKFTFPFLLKAI 144

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           A + A+  G +VH +VL++G      V N+L+HFY   G
Sbjct: 145 AKIPALLEGKTVHGMVLKAGLSSDAFVQNSLIHFYANCG 183


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELF-NFVRSQSILLDEFTFVPILKSS 120
           YA  +F++I  PNLY +NT++RAYS S EP Q F +F   V +     +EFTF  ++K++
Sbjct: 91  YAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAA 150

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           A ++    G ++H +V++S F   L ++N+L+HFY + G
Sbjct: 151 ARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICG 189


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
           gi|557530863|gb|ESR42046.1| hypothetical protein
           CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 YAVSIFERIQNPNLYMYNTMLRAYSISDEPEQVFELF-NFVRSQSILLDEFTFVPILKSS 120
           YA  +F++I  PNLY +NT++RAYS S EP Q F +F   V +     +EFTF  ++K++
Sbjct: 82  YAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAA 141

Query: 119 ANMLAIWTGLSVHSLVLRSGFILFLNVNNTLMHFYCVYG 3
           A ++    G ++H +V++S F   L ++N+L+HFY + G
Sbjct: 142 ARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICG 180